Mutagenetix > Incidental Mutation

Incidental Mutation 'R4074:Gm5134'

316475

Institutional Source

Beutler Lab

Gene Symbol

Gm5134

Ensembl Gene

ENSMUSG00000033255

Gene Name

predicted gene 5134

Synonyms

MMRRC Submission

040855-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.097) question?

Stock #

R4074 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

75790348-75845425 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 75844365 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tryptophan to Arginine at position 574 (W574R)

Ref Sequence

ENSEMBL: ENSMUSP00000097172 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099577]

AlphaFold

E9QAB5

Predicted Effect

probably damaging
Transcript: ENSMUST00000099577
AA Change: W574R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000097172
Gene: ENSMUSG00000033255
AA Change: W574R

Domain	Start	End	E-Value	Type
Pfam:SSF	32	466	2.9e-119	PFAM
transmembrane domain	500	522	N/A	INTRINSIC
transmembrane domain	651	670	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000184957

Meta Mutation Damage Score

0.6467

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.5%

Validation Efficiency

95% (63/66)

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4921504E06Rik	T	C	2: 19,485,401 (GRCm39)	E422G	probably damaging	Het
Ace3	A	G	11: 105,888,040 (GRCm39)	Y287C	probably damaging	Het
Adam34l	A	T	8: 44,079,387 (GRCm39)	F279Y	probably damaging	Het
Albfm1	T	A	5: 90,740,727 (GRCm39)		probably null	Het
Arfgap3	C	T	15: 83,187,330 (GRCm39)	A510T	probably damaging	Het
Atg12	A	G	18: 46,870,491 (GRCm39)	F92L	probably benign	Het
Axl	A	G	7: 25,463,336 (GRCm39)		probably benign	Het
Chgb	C	A	2: 132,635,847 (GRCm39)	D596E	possibly damaging	Het
Cmtr2	T	A	8: 110,947,849 (GRCm39)	F53Y	possibly damaging	Het
Cnot10	A	G	9: 114,452,015 (GRCm39)	F254L	possibly damaging	Het
Crb2	G	T	2: 37,676,855 (GRCm39)	C251F	probably damaging	Het
Crybg3	A	T	16: 59,376,120 (GRCm39)		probably benign	Het
Cytl1	A	G	5: 37,892,940 (GRCm39)	I17V	unknown	Het
D930020B18Rik	A	G	10: 121,492,123 (GRCm39)		probably benign	Het
Depp1	A	G	6: 116,629,029 (GRCm39)	N124S	possibly damaging	Het
Dnah11	A	G	12: 118,009,413 (GRCm39)	M2083T	probably benign	Het
Dst	A	G	1: 34,231,350 (GRCm39)	E2656G	probably benign	Het
Dst	T	C	1: 34,267,542 (GRCm39)	F4995L	probably damaging	Het
Egf	C	T	3: 129,529,618 (GRCm39)	R264Q	probably benign	Het
Eps15l1	A	G	8: 73,134,128 (GRCm39)	I482T	probably damaging	Het
Eqtn	A	G	4: 94,808,199 (GRCm39)	I201T	possibly damaging	Het
Ero1a	A	T	14: 45,529,893 (GRCm39)		probably null	Het
Etl4	T	C	2: 20,814,030 (GRCm39)		probably benign	Het
Fcho1	T	C	8: 72,163,013 (GRCm39)	H672R	probably damaging	Het
Glt6d1	T	C	2: 25,684,139 (GRCm39)	D289G	probably damaging	Het
Gm5414	T	C	15: 101,533,988 (GRCm39)	N332D	probably benign	Het
Gnb3	T	A	6: 124,813,942 (GRCm39)	E215D	probably benign	Het
Ighv1-30	C	T	12: 114,781,021 (GRCm39)		noncoding transcript	Het
Ighv1-4	A	G	12: 114,451,147 (GRCm39)	S15P	possibly damaging	Het
Igkv1-133	T	G	6: 67,702,505 (GRCm39)	Y74*	probably null	Het
Il17f	G	A	1: 20,847,987 (GRCm39)		probably benign	Het
Itpr2	C	T	6: 146,274,742 (GRCm39)		probably null	Het
Krtap31-1	T	C	11: 99,799,058 (GRCm39)	I87T	possibly damaging	Het
Lilra6	A	T	7: 3,917,889 (GRCm39)	F85Y	probably benign	Het
Lrig3	C	T	10: 125,849,277 (GRCm39)	T999I	probably benign	Het
Myh7b	T	C	2: 155,460,678 (GRCm39)	I277T	probably damaging	Het
Myo3b	T	C	2: 70,119,808 (GRCm39)	F984S	probably damaging	Het
Naip5	G	A	13: 100,382,572 (GRCm39)	R46W	probably damaging	Het
Nup205	T	A	6: 35,168,975 (GRCm39)		probably null	Het
Or52e18	A	T	7: 104,609,923 (GRCm39)	N5K	probably damaging	Het
Pde11a	C	T	2: 76,168,242 (GRCm39)	R237H	probably damaging	Het
Pdk4	T	C	6: 5,491,865 (GRCm39)	N69S	probably benign	Het
Pot1a	T	C	6: 25,752,356 (GRCm39)		probably null	Het
Pramel33	A	T	5: 93,633,057 (GRCm39)	M50K	probably damaging	Het
Psg23	A	T	7: 18,341,043 (GRCm39)	S404T	possibly damaging	Het
Rev1	T	G	1: 38,093,319 (GRCm39)	K1075T	possibly damaging	Het
Rrbp1	T	G	2: 143,805,030 (GRCm39)	Q1045P	probably benign	Het
Scg2	A	C	1: 79,414,574 (GRCm39)	F50V	probably damaging	Het
Sel1l3	A	G	5: 53,311,629 (GRCm39)	Y619H	probably damaging	Het
Slco1a5	A	T	6: 142,213,950 (GRCm39)	I57K	possibly damaging	Het
Srp72	C	A	5: 77,146,098 (GRCm39)	T633K	probably benign	Het
Swt1	A	G	1: 151,270,520 (GRCm39)	V565A	probably benign	Het
Tesk1	A	G	4: 43,443,606 (GRCm39)	I58V	possibly damaging	Het
Tm2d3	T	A	7: 65,347,498 (GRCm39)	L49*	probably null	Het
Tmprss11e	T	C	5: 86,863,502 (GRCm39)	T188A	possibly damaging	Het
Tnxb	A	G	17: 34,890,845 (GRCm39)	N396S	probably benign	Het
Tuba8	T	A	6: 121,199,756 (GRCm39)	S147T	probably damaging	Het
Usp8	A	G	2: 126,594,290 (GRCm39)	D822G	probably damaging	Het
Vmn2r13	T	A	5: 109,304,566 (GRCm39)	I622F	probably damaging	Het
Vmn2r24	A	T	6: 123,764,374 (GRCm39)	H417L	possibly damaging	Het
Zfp608	A	T	18: 55,031,180 (GRCm39)	V920E	probably damaging	Het
Zmym2	T	C	14: 57,140,461 (GRCm39)	L100P	probably damaging	Het

Other mutations in Gm5134

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00941:Gm5134	APN	10	75,836,255 (GRCm39)	missense	possibly damaging	0.70
IGL01371:Gm5134	APN	10	75,840,581 (GRCm39)	missense	probably damaging	0.99
IGL02140:Gm5134	APN	10	75,821,945 (GRCm39)	missense	probably benign	0.03
IGL02197:Gm5134	APN	10	75,790,536 (GRCm39)	critical splice donor site	probably null
IGL02233:Gm5134	APN	10	75,844,334 (GRCm39)	critical splice acceptor site	probably null
IGL02612:Gm5134	APN	10	75,828,323 (GRCm39)	missense	probably damaging	1.00
IGL02896:Gm5134	APN	10	75,810,058 (GRCm39)	missense	possibly damaging	0.82
R0021:Gm5134	UTSW	10	75,829,718 (GRCm39)	missense	probably damaging	1.00
R0021:Gm5134	UTSW	10	75,829,718 (GRCm39)	missense	probably damaging	1.00
R0035:Gm5134	UTSW	10	75,829,698 (GRCm39)	missense	probably benign	0.01
R0035:Gm5134	UTSW	10	75,829,698 (GRCm39)	missense	probably benign	0.01
R0110:Gm5134	UTSW	10	75,810,079 (GRCm39)	missense	probably benign	0.03
R0499:Gm5134	UTSW	10	75,828,359 (GRCm39)	missense	probably benign	0.00
R0510:Gm5134	UTSW	10	75,810,079 (GRCm39)	missense	probably benign	0.03
R1429:Gm5134	UTSW	10	75,814,215 (GRCm39)	missense	probably damaging	1.00
R1726:Gm5134	UTSW	10	75,828,361 (GRCm39)	missense	possibly damaging	0.83
R1918:Gm5134	UTSW	10	75,812,180 (GRCm39)	missense	possibly damaging	0.70
R1956:Gm5134	UTSW	10	75,840,680 (GRCm39)	missense	possibly damaging	0.89
R1993:Gm5134	UTSW	10	75,802,227 (GRCm39)	missense	probably damaging	0.96
R2049:Gm5134	UTSW	10	75,840,718 (GRCm39)	missense	possibly damaging	0.92
R2188:Gm5134	UTSW	10	75,831,670 (GRCm39)	missense	probably damaging	1.00
R3551:Gm5134	UTSW	10	75,836,281 (GRCm39)	missense	probably benign	0.08
R4435:Gm5134	UTSW	10	75,831,658 (GRCm39)	missense	probably damaging	1.00
R4466:Gm5134	UTSW	10	75,844,409 (GRCm39)	missense	probably benign	0.00
R5180:Gm5134	UTSW	10	75,812,200 (GRCm39)	missense	probably damaging	1.00
R5446:Gm5134	UTSW	10	75,831,670 (GRCm39)	missense	probably damaging	1.00
R5601:Gm5134	UTSW	10	75,821,786 (GRCm39)	missense	probably damaging	0.98
R5627:Gm5134	UTSW	10	75,821,942 (GRCm39)	missense	possibly damaging	0.93
R5777:Gm5134	UTSW	10	75,840,594 (GRCm39)	missense	probably benign	0.00
R5867:Gm5134	UTSW	10	75,844,450 (GRCm39)	missense	probably benign	0.00
R6145:Gm5134	UTSW	10	75,831,673 (GRCm39)	missense	probably damaging	0.99
R6232:Gm5134	UTSW	10	75,821,859 (GRCm39)	missense	possibly damaging	0.95
R6271:Gm5134	UTSW	10	75,831,643 (GRCm39)	missense	probably benign	0.32
R6329:Gm5134	UTSW	10	75,790,494 (GRCm39)	missense	possibly damaging	0.68
R6723:Gm5134	UTSW	10	75,844,453 (GRCm39)	missense	probably benign
R7049:Gm5134	UTSW	10	75,828,292 (GRCm39)	missense	probably damaging	0.97
R7305:Gm5134	UTSW	10	75,836,233 (GRCm39)	missense	probably damaging	1.00
R7579:Gm5134	UTSW	10	75,800,271 (GRCm39)	missense	probably damaging	1.00
R9190:Gm5134	UTSW	10	75,844,645 (GRCm39)	missense	probably damaging	1.00
R9716:Gm5134	UTSW	10	75,821,943 (GRCm39)	missense	probably benign	0.27
R9718:Gm5134	UTSW	10	75,828,331 (GRCm39)	missense	possibly damaging	0.90
X0050:Gm5134	UTSW	10	75,828,344 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CACCCAGTGATGTCTTAGTCG -3'
(R):5'- TCTTCCAGAAGAGGCTCTCG -3'

Sequencing Primer
(F):5'- ACCCAGTGATGTCTTAGTCGTTTTC -3'
(R):5'- AGAAGAGGCTCTCGGGTTC -3'

Posted On

2015-05-15