Incidental Mutation 'R0391:Chd1'
ID |
31730 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Chd1
|
Ensembl Gene |
ENSMUSG00000023852 |
Gene Name |
chromodomain helicase DNA binding protein 1 |
Synonyms |
4930525N21Rik |
MMRRC Submission |
038597-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0391 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
15925229-15992872 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to T
at 15970156 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glycine to Cysteine
at position 970
(G970C)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000134091
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000024627]
[ENSMUST00000173311]
|
AlphaFold |
P40201 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000024627
AA Change: G970C
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000024627 Gene: ENSMUSG00000023852 AA Change: G970C
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
67 |
N/A |
INTRINSIC |
low complexity region
|
105 |
115 |
N/A |
INTRINSIC |
low complexity region
|
116 |
136 |
N/A |
INTRINSIC |
low complexity region
|
151 |
175 |
N/A |
INTRINSIC |
low complexity region
|
213 |
230 |
N/A |
INTRINSIC |
CHROMO
|
268 |
355 |
6.43e-20 |
SMART |
CHROMO
|
385 |
443 |
1.19e-14 |
SMART |
DEXDc
|
475 |
672 |
3.44e-34 |
SMART |
Blast:DEXDc
|
692 |
786 |
2e-54 |
BLAST |
low complexity region
|
787 |
799 |
N/A |
INTRINSIC |
HELICc
|
816 |
900 |
8.48e-25 |
SMART |
Blast:DEXDc
|
955 |
1234 |
1e-112 |
BLAST |
PDB:4B4C|A
|
1119 |
1320 |
1e-132 |
PDB |
low complexity region
|
1325 |
1348 |
N/A |
INTRINSIC |
low complexity region
|
1377 |
1388 |
N/A |
INTRINSIC |
DUF4208
|
1396 |
1500 |
5.54e-51 |
SMART |
low complexity region
|
1507 |
1516 |
N/A |
INTRINSIC |
low complexity region
|
1538 |
1549 |
N/A |
INTRINSIC |
low complexity region
|
1626 |
1650 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000173311
AA Change: G970C
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000134091 Gene: ENSMUSG00000023852 AA Change: G970C
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
67 |
N/A |
INTRINSIC |
low complexity region
|
105 |
115 |
N/A |
INTRINSIC |
low complexity region
|
116 |
136 |
N/A |
INTRINSIC |
low complexity region
|
151 |
175 |
N/A |
INTRINSIC |
low complexity region
|
213 |
230 |
N/A |
INTRINSIC |
CHROMO
|
268 |
355 |
6.43e-20 |
SMART |
CHROMO
|
385 |
443 |
1.19e-14 |
SMART |
DEXDc
|
475 |
672 |
3.44e-34 |
SMART |
Blast:DEXDc
|
692 |
786 |
2e-54 |
BLAST |
low complexity region
|
787 |
799 |
N/A |
INTRINSIC |
HELICc
|
816 |
900 |
8.48e-25 |
SMART |
Blast:DEXDc
|
955 |
1078 |
2e-38 |
BLAST |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000174461
AA Change: G354C
|
SMART Domains |
Protein: ENSMUSP00000134718 Gene: ENSMUSG00000023852 AA Change: G354C
Domain | Start | End | E-Value | Type |
Pfam:SNF2_N
|
1 |
148 |
3.6e-34 |
PFAM |
low complexity region
|
172 |
184 |
N/A |
INTRINSIC |
HELICc
|
201 |
285 |
8.48e-25 |
SMART |
Blast:DEXDc
|
340 |
516 |
1e-47 |
BLAST |
|
Meta Mutation Damage Score |
0.8350 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.2%
- 10x: 95.9%
- 20x: 91.8%
|
Validation Efficiency |
97% (97/100) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a knock-out allele exhibit complete embryonic lethality associated with arrest of epiblast development due to increased apoptosis and cell cycle defects, abnormal rostral-caudal axis patterning, and failure to gastrulate. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 97 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
9530002B09Rik |
T |
A |
4: 122,594,970 (GRCm39) |
|
probably benign |
Het |
Abcc2 |
G |
A |
19: 43,810,044 (GRCm39) |
|
probably benign |
Het |
Abcc8 |
C |
G |
7: 45,771,597 (GRCm39) |
G838A |
probably damaging |
Het |
Akr1c21 |
G |
A |
13: 4,631,199 (GRCm39) |
A245T |
probably damaging |
Het |
Anapc15-ps |
T |
C |
10: 95,509,139 (GRCm39) |
E47G |
probably damaging |
Het |
Apoa1 |
A |
G |
9: 46,141,140 (GRCm39) |
T79A |
probably benign |
Het |
Atp6v1b1 |
A |
G |
6: 83,733,903 (GRCm39) |
H378R |
possibly damaging |
Het |
C4b |
A |
G |
17: 34,954,588 (GRCm39) |
|
probably benign |
Het |
Catsperd |
A |
T |
17: 56,969,821 (GRCm39) |
E638D |
probably benign |
Het |
Cckar |
C |
T |
5: 53,863,595 (GRCm39) |
|
probably null |
Het |
Cfap100 |
C |
T |
6: 90,382,321 (GRCm39) |
|
probably benign |
Het |
Col14a1 |
A |
G |
15: 55,309,655 (GRCm39) |
|
probably benign |
Het |
Col17a1 |
C |
T |
19: 47,652,263 (GRCm39) |
V698M |
probably damaging |
Het |
Cpeb1 |
T |
C |
7: 81,011,473 (GRCm39) |
D156G |
possibly damaging |
Het |
Cryl1 |
A |
G |
14: 57,541,232 (GRCm39) |
Y151H |
possibly damaging |
Het |
Csmd3 |
C |
A |
15: 47,520,969 (GRCm39) |
V1881L |
probably damaging |
Het |
Ctnnal1 |
C |
T |
4: 56,847,921 (GRCm39) |
A73T |
probably damaging |
Het |
Cyp2c37 |
T |
C |
19: 39,982,950 (GRCm39) |
S180P |
probably damaging |
Het |
Cyp2c54 |
T |
C |
19: 40,060,613 (GRCm39) |
T123A |
possibly damaging |
Het |
Dennd6b |
T |
C |
15: 89,071,417 (GRCm39) |
D304G |
probably damaging |
Het |
Dnmt3l |
T |
C |
10: 77,887,750 (GRCm39) |
|
probably benign |
Het |
Eci1 |
G |
A |
17: 24,652,234 (GRCm39) |
|
probably null |
Het |
Efhc1 |
A |
G |
1: 21,030,412 (GRCm39) |
Y115C |
probably damaging |
Het |
Ern1 |
T |
A |
11: 106,298,004 (GRCm39) |
K706* |
probably null |
Het |
Ghrl |
T |
C |
6: 113,696,299 (GRCm39) |
E31G |
probably damaging |
Het |
Gpr108 |
A |
C |
17: 57,550,101 (GRCm39) |
V179G |
probably benign |
Het |
Henmt1 |
A |
G |
3: 108,865,851 (GRCm39) |
|
probably benign |
Het |
Ift172 |
A |
G |
5: 31,444,011 (GRCm39) |
V69A |
probably damaging |
Het |
Il17ra |
T |
C |
6: 120,453,940 (GRCm39) |
|
probably benign |
Het |
Il17rb |
T |
C |
14: 29,726,304 (GRCm39) |
N95D |
probably benign |
Het |
Il17rb |
G |
T |
14: 29,728,112 (GRCm39) |
|
probably null |
Het |
Iqub |
G |
A |
6: 24,446,154 (GRCm39) |
L757F |
probably benign |
Het |
Itpr1 |
T |
C |
6: 108,355,128 (GRCm39) |
V473A |
probably benign |
Het |
Itpr2 |
T |
G |
6: 146,131,271 (GRCm39) |
N1978H |
probably damaging |
Het |
Klk1b26 |
T |
A |
7: 43,662,151 (GRCm39) |
F3Y |
probably damaging |
Het |
Lars1 |
A |
G |
18: 42,384,428 (GRCm39) |
V50A |
probably benign |
Het |
Lax1 |
G |
T |
1: 133,607,804 (GRCm39) |
H312Q |
probably benign |
Het |
Lctl |
T |
C |
9: 64,029,596 (GRCm39) |
|
probably benign |
Het |
Lrp2 |
T |
A |
2: 69,287,202 (GRCm39) |
D3745V |
probably damaging |
Het |
Lrp2 |
G |
A |
2: 69,290,681 (GRCm39) |
|
probably benign |
Het |
Lvrn |
A |
T |
18: 46,983,533 (GRCm39) |
H92L |
probably benign |
Het |
Marchf1 |
A |
G |
8: 66,871,625 (GRCm39) |
T385A |
probably damaging |
Het |
Marf1 |
C |
T |
16: 13,960,398 (GRCm39) |
A549T |
probably damaging |
Het |
Mbd5 |
T |
C |
2: 49,162,428 (GRCm39) |
V970A |
possibly damaging |
Het |
Mccc1 |
A |
G |
3: 36,017,719 (GRCm39) |
|
probably benign |
Het |
Mpp4 |
A |
T |
1: 59,182,988 (GRCm39) |
|
probably benign |
Het |
Mrnip |
G |
A |
11: 50,090,747 (GRCm39) |
A304T |
probably damaging |
Het |
Muc5b |
T |
C |
7: 141,418,819 (GRCm39) |
S3922P |
possibly damaging |
Het |
Myh3 |
T |
A |
11: 66,987,333 (GRCm39) |
|
probably benign |
Het |
Nbea |
A |
T |
3: 55,944,698 (GRCm39) |
H555Q |
probably damaging |
Het |
Niban3 |
T |
A |
8: 72,055,143 (GRCm39) |
|
probably benign |
Het |
Nlrp9c |
A |
T |
7: 26,070,901 (GRCm39) |
|
probably benign |
Het |
Nmur1 |
A |
T |
1: 86,315,400 (GRCm39) |
V178E |
probably damaging |
Het |
Nod2 |
T |
G |
8: 89,390,406 (GRCm39) |
S238A |
probably benign |
Het |
Ogfod1 |
A |
T |
8: 94,789,651 (GRCm39) |
T451S |
probably damaging |
Het |
Or1e17 |
T |
C |
11: 73,831,935 (GRCm39) |
F288L |
probably damaging |
Het |
Or2d36 |
T |
A |
7: 106,747,394 (GRCm39) |
Y290* |
probably null |
Het |
Or2z8 |
C |
T |
8: 72,812,244 (GRCm39) |
T240M |
probably damaging |
Het |
Or8b8 |
G |
A |
9: 37,809,138 (GRCm39) |
G146D |
probably benign |
Het |
Pcdh20 |
T |
C |
14: 88,706,104 (GRCm39) |
I399V |
probably benign |
Het |
Pdlim1 |
G |
T |
19: 40,232,017 (GRCm39) |
H120Q |
probably damaging |
Het |
Plg |
T |
C |
17: 12,637,968 (GRCm39) |
V798A |
probably damaging |
Het |
Polr2c |
A |
G |
8: 95,584,403 (GRCm39) |
I39V |
possibly damaging |
Het |
Ppfia2 |
C |
A |
10: 106,666,575 (GRCm39) |
|
probably benign |
Het |
Ppp1r3a |
A |
T |
6: 14,719,696 (GRCm39) |
I406N |
probably benign |
Het |
Psg28 |
A |
T |
7: 18,160,098 (GRCm39) |
M366K |
probably benign |
Het |
Rad54b |
T |
C |
4: 11,601,702 (GRCm39) |
I419T |
probably damaging |
Het |
Rnf43 |
A |
G |
11: 87,622,108 (GRCm39) |
Q403R |
possibly damaging |
Het |
Sema6a |
G |
A |
18: 47,423,112 (GRCm39) |
|
probably null |
Het |
Slc28a3 |
A |
G |
13: 58,717,229 (GRCm39) |
|
probably benign |
Het |
Smad2 |
A |
T |
18: 76,422,108 (GRCm39) |
|
probably null |
Het |
Smad4 |
G |
A |
18: 73,791,720 (GRCm39) |
P274S |
probably benign |
Het |
Smchd1 |
A |
T |
17: 71,710,149 (GRCm39) |
V906D |
probably damaging |
Het |
Soat2 |
C |
A |
15: 102,067,188 (GRCm39) |
R320S |
possibly damaging |
Het |
Spata33 |
C |
T |
8: 123,948,626 (GRCm39) |
A57V |
probably damaging |
Het |
Stab1 |
A |
G |
14: 30,865,375 (GRCm39) |
L1814P |
probably benign |
Het |
Stab2 |
T |
C |
10: 86,783,008 (GRCm39) |
K680R |
probably benign |
Het |
Stil |
A |
G |
4: 114,898,369 (GRCm39) |
|
probably null |
Het |
Sympk |
T |
A |
7: 18,780,774 (GRCm39) |
L759H |
probably benign |
Het |
Tet1 |
A |
T |
10: 62,650,325 (GRCm39) |
|
probably null |
Het |
Tfpi2 |
A |
T |
6: 3,965,460 (GRCm39) |
N117K |
probably benign |
Het |
Tle3 |
A |
G |
9: 61,323,943 (GRCm39) |
Y766C |
probably damaging |
Het |
Trpt1 |
C |
A |
19: 6,975,298 (GRCm39) |
|
probably null |
Het |
Tshz1 |
A |
G |
18: 84,034,174 (GRCm39) |
F78S |
possibly damaging |
Het |
Ttc1 |
T |
C |
11: 43,629,635 (GRCm39) |
D177G |
probably damaging |
Het |
Ttc13 |
T |
A |
8: 125,401,140 (GRCm39) |
Y741F |
probably damaging |
Het |
Ulk3 |
C |
T |
9: 57,502,115 (GRCm39) |
S462L |
probably benign |
Het |
Utrn |
C |
T |
10: 12,401,077 (GRCm39) |
|
probably benign |
Het |
V1rd19 |
A |
C |
7: 23,703,010 (GRCm39) |
T159P |
probably damaging |
Het |
Vars1 |
T |
C |
17: 35,230,462 (GRCm39) |
V515A |
possibly damaging |
Het |
Vmn1r85 |
A |
G |
7: 12,818,515 (GRCm39) |
Y210H |
probably benign |
Het |
Vmn2r89 |
A |
G |
14: 51,693,435 (GRCm39) |
T262A |
probably damaging |
Het |
Vps53 |
G |
A |
11: 76,012,405 (GRCm39) |
T209I |
probably benign |
Het |
Wdfy2 |
T |
C |
14: 63,162,582 (GRCm39) |
F95L |
possibly damaging |
Het |
Wwp1 |
G |
T |
4: 19,627,911 (GRCm39) |
S694Y |
probably damaging |
Het |
Zbtb8b |
T |
A |
4: 129,326,463 (GRCm39) |
D201V |
probably damaging |
Het |
Zmym5 |
A |
C |
14: 57,041,908 (GRCm39) |
N123K |
possibly damaging |
Het |
|
Other mutations in Chd1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00704:Chd1
|
APN |
17 |
15,952,827 (GRCm39) |
missense |
probably benign |
0.37 |
IGL01356:Chd1
|
APN |
17 |
15,970,127 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01369:Chd1
|
APN |
17 |
15,975,259 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL01519:Chd1
|
APN |
17 |
17,598,831 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01604:Chd1
|
APN |
17 |
15,990,359 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01635:Chd1
|
APN |
17 |
17,598,858 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01721:Chd1
|
APN |
17 |
15,990,430 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01959:Chd1
|
APN |
17 |
15,962,435 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02367:Chd1
|
APN |
17 |
17,610,315 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02476:Chd1
|
APN |
17 |
15,954,535 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02756:Chd1
|
APN |
17 |
15,951,069 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02817:Chd1
|
APN |
17 |
15,969,762 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL03084:Chd1
|
APN |
17 |
15,990,560 (GRCm39) |
missense |
probably benign |
0.22 |
IGL03108:Chd1
|
APN |
17 |
15,945,543 (GRCm39) |
missense |
possibly damaging |
0.70 |
Holly
|
UTSW |
17 |
15,946,545 (GRCm39) |
missense |
possibly damaging |
0.72 |
R0053:Chd1
|
UTSW |
17 |
15,967,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R0053:Chd1
|
UTSW |
17 |
15,967,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R0128:Chd1
|
UTSW |
17 |
17,613,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R0197:Chd1
|
UTSW |
17 |
15,945,693 (GRCm39) |
missense |
probably benign |
|
R0285:Chd1
|
UTSW |
17 |
17,594,942 (GRCm39) |
splice site |
probably benign |
|
R0326:Chd1
|
UTSW |
17 |
15,988,830 (GRCm39) |
missense |
probably benign |
|
R0326:Chd1
|
UTSW |
17 |
15,988,828 (GRCm39) |
missense |
probably damaging |
1.00 |
R0372:Chd1
|
UTSW |
17 |
17,607,552 (GRCm39) |
missense |
probably benign |
0.14 |
R0486:Chd1
|
UTSW |
17 |
15,954,604 (GRCm39) |
missense |
probably damaging |
0.99 |
R0637:Chd1
|
UTSW |
17 |
15,962,550 (GRCm39) |
missense |
possibly damaging |
0.50 |
R0675:Chd1
|
UTSW |
17 |
15,978,523 (GRCm39) |
unclassified |
probably benign |
|
R0701:Chd1
|
UTSW |
17 |
15,945,693 (GRCm39) |
missense |
probably benign |
|
R0788:Chd1
|
UTSW |
17 |
15,927,376 (GRCm39) |
missense |
possibly damaging |
0.86 |
R0848:Chd1
|
UTSW |
17 |
15,990,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R0883:Chd1
|
UTSW |
17 |
15,945,693 (GRCm39) |
missense |
probably benign |
|
R1169:Chd1
|
UTSW |
17 |
15,955,994 (GRCm39) |
missense |
probably damaging |
1.00 |
R1218:Chd1
|
UTSW |
17 |
15,945,574 (GRCm39) |
missense |
probably damaging |
1.00 |
R1370:Chd1
|
UTSW |
17 |
17,607,742 (GRCm39) |
missense |
probably benign |
0.00 |
R1470:Chd1
|
UTSW |
17 |
15,946,545 (GRCm39) |
missense |
possibly damaging |
0.72 |
R1470:Chd1
|
UTSW |
17 |
15,946,545 (GRCm39) |
missense |
possibly damaging |
0.72 |
R1478:Chd1
|
UTSW |
17 |
15,959,769 (GRCm39) |
missense |
probably damaging |
0.99 |
R1752:Chd1
|
UTSW |
17 |
15,963,494 (GRCm39) |
critical splice donor site |
probably null |
|
R1759:Chd1
|
UTSW |
17 |
17,607,533 (GRCm39) |
missense |
probably benign |
0.00 |
R1767:Chd1
|
UTSW |
17 |
15,990,565 (GRCm39) |
missense |
probably damaging |
1.00 |
R1938:Chd1
|
UTSW |
17 |
15,982,748 (GRCm39) |
missense |
probably benign |
0.39 |
R2007:Chd1
|
UTSW |
17 |
15,951,268 (GRCm39) |
missense |
probably damaging |
1.00 |
R2069:Chd1
|
UTSW |
17 |
15,962,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R3771:Chd1
|
UTSW |
17 |
17,594,913 (GRCm39) |
missense |
probably damaging |
1.00 |
R3773:Chd1
|
UTSW |
17 |
17,594,913 (GRCm39) |
missense |
probably damaging |
1.00 |
R3849:Chd1
|
UTSW |
17 |
15,952,133 (GRCm39) |
missense |
probably damaging |
1.00 |
R4241:Chd1
|
UTSW |
17 |
15,990,289 (GRCm39) |
nonsense |
probably null |
|
R4242:Chd1
|
UTSW |
17 |
15,990,289 (GRCm39) |
nonsense |
probably null |
|
R4354:Chd1
|
UTSW |
17 |
17,610,263 (GRCm39) |
missense |
probably benign |
0.23 |
R4468:Chd1
|
UTSW |
17 |
15,980,657 (GRCm39) |
missense |
probably damaging |
0.99 |
R4469:Chd1
|
UTSW |
17 |
15,980,657 (GRCm39) |
missense |
probably damaging |
0.99 |
R4731:Chd1
|
UTSW |
17 |
17,598,079 (GRCm39) |
missense |
probably benign |
0.36 |
R4824:Chd1
|
UTSW |
17 |
15,953,386 (GRCm39) |
missense |
probably damaging |
1.00 |
R4840:Chd1
|
UTSW |
17 |
15,989,016 (GRCm39) |
missense |
probably damaging |
1.00 |
R4840:Chd1
|
UTSW |
17 |
15,989,015 (GRCm39) |
nonsense |
probably null |
|
R4880:Chd1
|
UTSW |
17 |
17,594,916 (GRCm39) |
missense |
probably damaging |
1.00 |
R4960:Chd1
|
UTSW |
17 |
15,962,493 (GRCm39) |
missense |
probably damaging |
0.96 |
R5071:Chd1
|
UTSW |
17 |
15,982,667 (GRCm39) |
missense |
probably benign |
|
R5078:Chd1
|
UTSW |
17 |
15,946,616 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5114:Chd1
|
UTSW |
17 |
15,948,460 (GRCm39) |
missense |
probably benign |
0.25 |
R5268:Chd1
|
UTSW |
17 |
15,956,005 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Chd1
|
UTSW |
17 |
15,990,530 (GRCm39) |
missense |
possibly damaging |
0.55 |
R5304:Chd1
|
UTSW |
17 |
15,975,213 (GRCm39) |
missense |
probably benign |
0.01 |
R5307:Chd1
|
UTSW |
17 |
15,952,832 (GRCm39) |
missense |
probably damaging |
1.00 |
R5458:Chd1
|
UTSW |
17 |
15,958,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R5553:Chd1
|
UTSW |
17 |
17,605,875 (GRCm39) |
missense |
probably benign |
0.17 |
R5623:Chd1
|
UTSW |
17 |
15,975,194 (GRCm39) |
missense |
probably damaging |
1.00 |
R6022:Chd1
|
UTSW |
17 |
17,598,035 (GRCm39) |
missense |
probably benign |
0.39 |
R6137:Chd1
|
UTSW |
17 |
15,978,950 (GRCm39) |
missense |
probably damaging |
1.00 |
R6257:Chd1
|
UTSW |
17 |
15,950,465 (GRCm39) |
splice site |
probably null |
|
R6373:Chd1
|
UTSW |
17 |
15,958,898 (GRCm39) |
missense |
probably damaging |
1.00 |
R6458:Chd1
|
UTSW |
17 |
15,950,864 (GRCm39) |
missense |
probably benign |
0.01 |
R6476:Chd1
|
UTSW |
17 |
17,601,250 (GRCm39) |
critical splice donor site |
probably null |
|
R6508:Chd1
|
UTSW |
17 |
15,958,895 (GRCm39) |
missense |
probably benign |
0.31 |
R6553:Chd1
|
UTSW |
17 |
15,945,692 (GRCm39) |
missense |
probably benign |
0.00 |
R6745:Chd1
|
UTSW |
17 |
17,607,429 (GRCm39) |
missense |
probably benign |
0.08 |
R7107:Chd1
|
UTSW |
17 |
15,981,628 (GRCm39) |
missense |
probably damaging |
0.98 |
R7230:Chd1
|
UTSW |
17 |
15,927,199 (GRCm39) |
splice site |
probably null |
|
R7317:Chd1
|
UTSW |
17 |
15,962,536 (GRCm39) |
missense |
possibly damaging |
0.71 |
R7341:Chd1
|
UTSW |
17 |
15,990,499 (GRCm39) |
missense |
probably damaging |
0.99 |
R7421:Chd1
|
UTSW |
17 |
15,969,660 (GRCm39) |
missense |
probably benign |
0.03 |
R7704:Chd1
|
UTSW |
17 |
15,987,737 (GRCm39) |
missense |
probably benign |
|
R7763:Chd1
|
UTSW |
17 |
15,953,303 (GRCm39) |
missense |
probably damaging |
1.00 |
R8156:Chd1
|
UTSW |
17 |
15,981,666 (GRCm39) |
missense |
probably benign |
|
R8194:Chd1
|
UTSW |
17 |
17,594,737 (GRCm39) |
start gained |
probably benign |
|
R8261:Chd1
|
UTSW |
17 |
17,607,804 (GRCm39) |
missense |
probably benign |
0.02 |
R8338:Chd1
|
UTSW |
17 |
15,990,242 (GRCm39) |
missense |
probably damaging |
1.00 |
R8401:Chd1
|
UTSW |
17 |
15,963,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R8411:Chd1
|
UTSW |
17 |
15,982,711 (GRCm39) |
missense |
probably damaging |
0.98 |
R9067:Chd1
|
UTSW |
17 |
15,951,107 (GRCm39) |
missense |
possibly damaging |
0.49 |
R9184:Chd1
|
UTSW |
17 |
15,962,551 (GRCm39) |
missense |
possibly damaging |
0.71 |
R9210:Chd1
|
UTSW |
17 |
15,950,767 (GRCm39) |
missense |
possibly damaging |
0.70 |
R9212:Chd1
|
UTSW |
17 |
15,950,767 (GRCm39) |
missense |
possibly damaging |
0.70 |
R9666:Chd1
|
UTSW |
17 |
15,955,976 (GRCm39) |
missense |
probably damaging |
1.00 |
R9673:Chd1
|
UTSW |
17 |
15,989,023 (GRCm39) |
missense |
probably benign |
0.24 |
Z1176:Chd1
|
UTSW |
17 |
15,988,995 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Chd1
|
UTSW |
17 |
15,986,609 (GRCm39) |
missense |
probably damaging |
0.98 |
Z1177:Chd1
|
UTSW |
17 |
15,968,063 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGGATACCACTGGGAAGACAGTGC -3'
(R):5'- ACTAGCTCAACCCTCAGCAGTGTG -3'
Sequencing Primer
(F):5'- GCTTGACTGTTACAGATAGATCGC -3'
(R):5'- GAGTCTCGGCTCTCTTCAGG -3'
|
Posted On |
2013-04-24 |