Incidental Mutation 'R4172:Spata25'
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ID318162
Institutional Source Beutler Lab
Gene Symbol Spata25
Ensembl Gene ENSMUSG00000017767
Gene Namespermatogenesis associated 25
Synonyms
MMRRC Submission 044391-MU
Accession Numbers
Is this an essential gene? Not available question?
Stock #R4172 (G1)
Quality Score225
Status Not validated
Chromosome2
Chromosomal Location164826389-164828537 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to A at 164827488 bp
ZygosityHeterozygous
Amino Acid Change Tryptophan to Leucine at position 201 (W201L)
Ref Sequence ENSEMBL: ENSMUSP00000017911 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000017908] [ENSMUST00000017911] [ENSMUST00000042775] [ENSMUST00000132282]
Predicted Effect probably benign
Transcript: ENSMUST00000017908
SMART Domains Protein: ENSMUSP00000017908
Gene: ENSMUSG00000017764

DomainStartEndE-ValueType
Pfam:SWIM 342 375 2e-9 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000017911
AA Change: W201L

PolyPhen 2 Score 0.847 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000017911
Gene: ENSMUSG00000017767
AA Change: W201L

DomainStartEndE-ValueType
Pfam:SPATA25 1 226 3.2e-144 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000042775
SMART Domains Protein: ENSMUSP00000041806
Gene: ENSMUSG00000039873

DomainStartEndE-ValueType
Pfam:Neuralized 25 90 1.1e-27 PFAM
SOCS_box 248 285 3.77e-6 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000132282
Predicted Effect noncoding transcript
Transcript: ENSMUST00000141411
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.7%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Akip1 C T 7: 109,707,509 Q138* probably null Het
Cdc5l A G 17: 45,419,772 I196T probably damaging Het
Dnah7b G T 1: 46,226,946 R2225L probably damaging Het
Gfra2 C A 14: 70,896,081 T117K possibly damaging Het
Gle1 T C 2: 29,938,526 I120T probably benign Het
Guf1 T A 5: 69,558,229 N52K possibly damaging Het
Helq T C 5: 100,771,847 K813E probably benign Het
Ighv7-4 A T 12: 114,223,015 F46I probably damaging Het
Il6st G A 13: 112,495,327 D467N probably benign Het
Jak1 C A 4: 101,159,132 V812L probably benign Het
Kank4 G T 4: 98,779,121 T363K probably damaging Het
Lcat C A 8: 105,942,427 W72L possibly damaging Het
Map2 T C 1: 66,413,600 S392P possibly damaging Het
Mtmr2 T C 9: 13,800,062 F456L probably damaging Het
Myh8 A T 11: 67,292,421 R709W probably damaging Het
Nop14 T C 5: 34,650,607 N337S probably damaging Het
Npbwr1 A G 1: 5,916,936 Y120H probably damaging Het
Olfr48 T G 2: 89,844,778 D65A probably damaging Het
Oxsm A T 14: 16,242,079 V230E probably damaging Het
Paox G A 7: 140,134,028 G234R probably damaging Het
Polq C T 16: 37,060,758 H1095Y probably benign Het
Rad51c T C 11: 87,402,746 T77A probably damaging Het
Ryr3 C A 2: 112,794,470 V2202F probably damaging Het
Shroom3 G T 5: 92,943,086 V1151F probably damaging Het
Snx27 T C 3: 94,503,487 H452R probably benign Het
Son C T 16: 91,659,362 H1666Y probably damaging Het
Spint2 A G 7: 29,263,672 V67A probably damaging Het
Srgap1 T C 10: 121,855,363 Y322C probably benign Het
Synm T C 7: 67,735,361 Y409C probably damaging Het
Tex11 C A X: 100,933,415 A487S possibly damaging Het
Tpm1 T C 9: 67,023,367 N283D probably benign Het
Trpv6 T C 6: 41,625,498 D318G probably damaging Het
Ube2j2 A G 4: 155,949,086 D39G probably damaging Het
Ubr1 C T 2: 120,946,622 probably null Het
Vwa5a T C 9: 38,723,870 F224L probably damaging Het
Zfp445 T A 9: 122,851,937 M980L probably benign Het
Other mutations in Spata25
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02402:Spata25 APN 2 164828457 start codon destroyed probably null 0.02
R5268:Spata25 UTSW 2 164828034 missense probably damaging 1.00
R7341:Spata25 UTSW 2 164827662 missense probably damaging 0.98
R7635:Spata25 UTSW 2 164827969 missense probably benign
Predicted Primers PCR Primer
(F):5'- GGTATGAAGAACTTCCTGCGG -3'
(R):5'- TCTGCCAATATCCTCCGAGG -3'

Sequencing Primer
(F):5'- TCAGGGTGGCTCAGTTACC -3'
(R):5'- AATATCCTCCGAGGCAGGG -3'
Posted On2015-06-10