Incidental Mutation 'R4208:Vmn1r87'
ID 319026
Institutional Source Beutler Lab
Gene Symbol Vmn1r87
Ensembl Gene ENSMUSG00000070815
Gene Name vomeronasal 1 receptor 87
Synonyms V1rk1
MMRRC Submission 041037-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.050) question?
Stock # R4208 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 12865398-12866285 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 12866185 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 34 (V34A)
Ref Sequence ENSEMBL: ENSMUSP00000154184 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000094827] [ENSMUST00000211249] [ENSMUST00000227443] [ENSMUST00000228800]
AlphaFold Q8R255
Predicted Effect probably benign
Transcript: ENSMUST00000094827
AA Change: V34A

PolyPhen 2 Score 0.372 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000092422
Gene: ENSMUSG00000070815
AA Change: V34A

DomainStartEndE-ValueType
Pfam:TAS2R 1 285 1.2e-11 PFAM
Pfam:V1R 14 280 1.8e-36 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000211249
AA Change: V34A

PolyPhen 2 Score 0.372 (Sensitivity: 0.90; Specificity: 0.89)
Predicted Effect probably benign
Transcript: ENSMUST00000227443
AA Change: V34A

PolyPhen 2 Score 0.372 (Sensitivity: 0.90; Specificity: 0.89)
Predicted Effect probably benign
Transcript: ENSMUST00000228800
AA Change: V34A

PolyPhen 2 Score 0.372 (Sensitivity: 0.90; Specificity: 0.89)
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 97.1%
  • 20x: 95.1%
Validation Efficiency 100% (57/57)
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A1cf T C 19: 31,910,060 (GRCm39) L284P probably benign Het
Abca8b G A 11: 109,872,551 (GRCm39) Q17* probably null Het
Abcc6 A C 7: 45,635,987 (GRCm39) L1020R probably damaging Het
Ace2 A G X: 162,952,581 (GRCm39) I110V probably benign Het
Adamts12 A G 15: 11,071,840 (GRCm39) H128R probably benign Het
Aoc1l2 A T 6: 48,908,581 (GRCm39) D527V probably damaging Het
Apol9a G C 15: 77,288,596 (GRCm39) T257S probably benign Het
B4galnt3 A G 6: 120,192,063 (GRCm39) S557P probably damaging Het
C3 C T 17: 57,512,303 (GRCm39) D1542N possibly damaging Het
Casp12 T C 9: 5,346,629 (GRCm39) L52P probably damaging Het
Cep126 C T 9: 8,100,822 (GRCm39) E571K probably damaging Het
Cfhr1 A G 1: 139,475,616 (GRCm39) probably benign Het
Cmah A G 13: 24,601,410 (GRCm39) probably null Het
Col10a1 C T 10: 34,271,539 (GRCm39) P504S probably damaging Het
Ctnna3 T A 10: 64,795,557 (GRCm39) D758E probably benign Het
Cyp2c65 T C 19: 39,079,099 (GRCm39) S393P probably damaging Het
Dclk2 A G 3: 86,738,129 (GRCm39) probably null Het
Dis3 T G 14: 99,332,752 (GRCm39) I227L probably benign Het
Efhc2 T C X: 17,096,789 (GRCm39) N186S possibly damaging Het
F13b G T 1: 139,444,079 (GRCm39) W471L probably damaging Het
Fam181a A G 12: 103,282,173 (GRCm39) D26G probably damaging Het
Gabpb2 A G 3: 95,111,245 (GRCm39) probably benign Het
Gm7293 A G 9: 51,534,879 (GRCm39) noncoding transcript Het
H3f3a C T 1: 180,630,703 (GRCm39) R117H probably benign Het
Ino80b G C 6: 83,099,314 (GRCm39) P178R probably damaging Het
Kif3b G A 2: 153,165,477 (GRCm39) R628Q probably damaging Het
Lars1 T C 18: 42,362,768 (GRCm39) E557G probably benign Het
Ldlrad3 C T 2: 101,783,507 (GRCm39) D240N probably damaging Het
Lingo2 T C 4: 35,709,810 (GRCm39) I57V probably benign Het
Lsr A G 7: 30,672,519 (GRCm39) I27T probably benign Het
Me2 T C 18: 73,924,156 (GRCm39) K352R probably benign Het
Met T C 6: 17,548,728 (GRCm39) V924A possibly damaging Het
Mpp3 T C 11: 101,891,426 (GRCm39) T571A probably benign Het
Or4c1 A T 2: 89,133,270 (GRCm39) I222N probably damaging Het
Or52n3 A G 7: 104,530,810 (GRCm39) T299A probably damaging Het
Padi1 C A 4: 140,544,538 (GRCm39) V552L possibly damaging Het
Pfkfb1 A T X: 149,405,184 (GRCm39) D208V possibly damaging Het
Rnase4 A G 14: 51,342,462 (GRCm39) K62R probably benign Het
RP24-126A19.1 C A 5: 146,832,606 (GRCm39) R123L noncoding transcript Het
Scn10a T A 9: 119,445,842 (GRCm39) E1438V probably damaging Het
Sfmbt2 T A 2: 10,547,793 (GRCm39) D458E probably damaging Het
Slitrk3 T A 3: 72,958,490 (GRCm39) Y94F possibly damaging Het
Sstr2 A C 11: 113,515,482 (GRCm39) T134P probably damaging Het
Steap4 A G 5: 8,030,404 (GRCm39) Y420C probably damaging Het
Tamm41 AGGG AGG 6: 114,989,320 (GRCm39) probably benign Het
Trav7-3 A G 14: 53,681,203 (GRCm39) T82A probably benign Het
Trbv23 A T 6: 41,193,022 (GRCm39) I6F probably benign Het
Zc3h7a C T 16: 10,982,508 (GRCm39) E6K possibly damaging Het
Zfp606 G A 7: 12,228,102 (GRCm39) C683Y probably damaging Het
Other mutations in Vmn1r87
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01400:Vmn1r87 APN 7 12,866,230 (GRCm39) missense probably damaging 1.00
IGL01577:Vmn1r87 APN 7 12,865,775 (GRCm39) missense probably benign 0.00
IGL02972:Vmn1r87 APN 7 12,866,256 (GRCm39) nonsense probably null
IGL03246:Vmn1r87 APN 7 12,866,288 (GRCm39) utr 5 prime probably benign
PIT4142001:Vmn1r87 UTSW 7 12,866,112 (GRCm39) missense probably benign 0.00
R0153:Vmn1r87 UTSW 7 12,866,211 (GRCm39) missense probably damaging 1.00
R0502:Vmn1r87 UTSW 7 12,865,583 (GRCm39) missense probably damaging 1.00
R0658:Vmn1r87 UTSW 7 12,865,756 (GRCm39) missense probably damaging 1.00
R1589:Vmn1r87 UTSW 7 12,865,703 (GRCm39) missense possibly damaging 0.46
R1731:Vmn1r87 UTSW 7 12,865,703 (GRCm39) missense possibly damaging 0.46
R2027:Vmn1r87 UTSW 7 12,865,823 (GRCm39) missense probably damaging 0.99
R2044:Vmn1r87 UTSW 7 12,865,748 (GRCm39) missense probably benign 0.02
R3124:Vmn1r87 UTSW 7 12,865,493 (GRCm39) missense probably damaging 1.00
R4731:Vmn1r87 UTSW 7 12,866,254 (GRCm39) missense possibly damaging 0.92
R4732:Vmn1r87 UTSW 7 12,866,254 (GRCm39) missense possibly damaging 0.92
R4733:Vmn1r87 UTSW 7 12,866,254 (GRCm39) missense possibly damaging 0.92
R5079:Vmn1r87 UTSW 7 12,866,253 (GRCm39) missense probably benign 0.01
R5125:Vmn1r87 UTSW 7 12,865,792 (GRCm39) missense possibly damaging 0.79
R5178:Vmn1r87 UTSW 7 12,865,792 (GRCm39) missense possibly damaging 0.79
R6599:Vmn1r87 UTSW 7 12,865,886 (GRCm39) nonsense probably null
R7067:Vmn1r87 UTSW 7 12,865,849 (GRCm39) missense probably benign 0.02
R7560:Vmn1r87 UTSW 7 12,865,745 (GRCm39) missense probably damaging 1.00
R7574:Vmn1r87 UTSW 7 12,865,613 (GRCm39) missense probably benign 0.01
R7910:Vmn1r87 UTSW 7 12,865,832 (GRCm39) missense probably damaging 1.00
R8040:Vmn1r87 UTSW 7 12,866,086 (GRCm39) missense possibly damaging 0.87
R8220:Vmn1r87 UTSW 7 12,865,427 (GRCm39) missense possibly damaging 0.72
R9690:Vmn1r87 UTSW 7 12,866,263 (GRCm39) missense probably benign 0.01
X0028:Vmn1r87 UTSW 7 12,865,910 (GRCm39) missense possibly damaging 0.52
Predicted Primers PCR Primer
(F):5'- GCCCACTTGGAATGTTTAGAACTG -3'
(R):5'- TTGGTTTGCCTTATCCTAGCAG -3'

Sequencing Primer
(F):5'- CTGAGAGTGATGGCTTGAAATACAC -3'
(R):5'- TGCCTTATCCTAGCAGAACAATG -3'
Posted On 2015-06-10