Mutagenetix > Incidental Mutation

Incidental Mutation 'R4232:Atg14'

320927

Institutional Source

Beutler Lab

Gene Symbol

Atg14

Ensembl Gene

ENSMUSG00000037526

Gene Name

autophagy related 14

Synonyms

Barkor, D14Ertd436e, D14Ertd114e

MMRRC Submission

041051-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.870) question?

Stock #

R4232 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

47540893-47570649 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 47551345 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Glutamic Acid at position 184 (K184E)

Ref Sequence

ENSEMBL: ENSMUSP00000153718 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042988] [ENSMUST00000226299]

AlphaFold

Q8CDJ3

Predicted Effect

probably benign
Transcript: ENSMUST00000042988
AA Change: K184E

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000039047
Gene: ENSMUSG00000037526
AA Change: K184E

Domain	Start	End	E-Value	Type
Pfam:Atg14	43	393	1.1e-79	PFAM
low complexity region	447	464	N/A	INTRINSIC
low complexity region	465	480	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000226299
AA Change: K184E

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.1%
20x: 94.9%

Validation Efficiency

92% (58/63)

MGI Phenotype

PHENOTYPE: Mice homozygous for a conditional allele following delivery of a Tat-cre exhibit increased mucin accumulation in colonic epithelial spheroids. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930567H17Rik	C	T	X: 70,394,529	A53T	probably benign	Het
Ajuba	T	C	14: 54,569,526	R490G	probably damaging	Het
Akap6	T	A	12: 53,139,671	N1289K	probably damaging	Het
Arhgap21	A	G	2: 20,887,137	V161A	probably damaging	Het
Aven	A	G	2: 112,627,768	D167G	probably damaging	Het
Celsr2	A	G	3: 108,413,772	F575L	probably benign	Het
Cflar	A	T	1: 58,740,993	Q249L	possibly damaging	Het
Col7a1	G	A	9: 108,972,813		probably null	Het
Dmxl2	T	C	9: 54,419,909	D944G	possibly damaging	Het
Dnah1	T	C	14: 31,304,916	N717S	probably benign	Het
Dnaja3	T	A	16: 4,699,871	N322K	possibly damaging	Het
Dnajb3	A	G	1: 88,205,252	S143P	possibly damaging	Het
Dtx3	A	G	10: 127,193,189	I60T	possibly damaging	Het
Dvl3	A	G	16: 20,524,233		probably benign	Het
Fam71b	C	A	11: 46,407,405	T512K	possibly damaging	Het
Fkbp7	A	T	2: 76,663,317	D177E	possibly damaging	Het
Galnt7	T	C	8: 57,652,966	I5V	probably benign	Het
Helz2	A	T	2: 181,229,902	L2639Q	probably damaging	Het
Hnrnpr	T	C	4: 136,339,189	M394T	probably benign	Het
Ip6k2	G	A	9: 108,805,648	R319Q	probably benign	Het
Kif14	T	A	1: 136,516,363	C1364*	probably null	Het
Macf1	T	C	4: 123,432,392	E5104G	probably damaging	Het
Mkl1	T	A	15: 81,023,595	K29M	probably damaging	Het
Mrps30	T	C	13: 118,386,840	D132G	probably damaging	Het
Mtbp	CATGA	CATGAATGA	15: 55,620,677		probably null	Het
Nfkb1	A	G	3: 135,603,770	V521A	probably damaging	Het
Olfr1535	T	C	13: 21,555,461	D187G	probably damaging	Het
Olfr850	G	T	9: 19,477,726	L175M	probably damaging	Het
P2rx6	T	C	16: 17,570,767	L335P	probably damaging	Het
Pcdhga5	A	G	18: 37,695,948	D483G	possibly damaging	Het
Pgpep1l	T	C	7: 68,237,079	T161A	probably benign	Het
Prss40	A	G	1: 34,560,792	V38A	probably benign	Het
Ptk2	C	A	15: 73,309,849	R104L	possibly damaging	Het
Ralgapa1	C	T	12: 55,640,644	R2019Q	probably damaging	Het
Rin2	C	T	2: 145,860,446	T354I	probably benign	Het
Rtp4	A	G	16: 23,613,083	N122D	possibly damaging	Het
Samd8	A	G	14: 21,780,145	Y213C	probably benign	Het
Shcbp1	T	A	8: 4,736,372	T577S	probably benign	Het
Tiprl	A	G	1: 165,222,587	V153A	probably damaging	Het
Tmprss7	A	T	16: 45,656,573	D775E	probably damaging	Het
Tnr	T	C	1: 159,886,215	S738P	possibly damaging	Het
Tsc22d4	T	C	5: 137,751,370		probably null	Het
Ttc21a	A	T	9: 119,942,618	H161L	probably benign	Het
Ubqln3	T	A	7: 104,141,803	E360V	probably benign	Het
Ugt1a10	C	A	1: 88,056,210	D243E	probably benign	Het
Vmn2r19	G	A	6: 123,329,912	V460I	probably benign	Het
Vmn2r58	T	A	7: 41,837,587	Y628F	possibly damaging	Het
Wnk1	A	T	6: 119,949,261	S1588T	possibly damaging	Het
Wscd2	A	G	5: 113,560,984	D200G	probably benign	Het
Zfp831	G	C	2: 174,705,654	W1543C	possibly damaging	Het

Other mutations in Atg14

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02088:Atg14	APN	14	47542859	missense	probably benign	0.00
IGL02513:Atg14	APN	14	47548994	missense	probably benign	0.03
IGL02513:Atg14	APN	14	47545624	splice site	probably benign
PIT4243001:Atg14	UTSW	14	47554574	missense	possibly damaging	0.77
R1463:Atg14	UTSW	14	47548994	missense	probably benign	0.03
R1479:Atg14	UTSW	14	47547239	critical splice donor site	probably null
R1499:Atg14	UTSW	14	47560645	missense	probably benign
R1781:Atg14	UTSW	14	47549150	critical splice acceptor site	probably null
R1974:Atg14	UTSW	14	47545841	missense	probably damaging	1.00
R2089:Atg14	UTSW	14	47542895	missense	probably damaging	1.00
R2091:Atg14	UTSW	14	47542895	missense	probably damaging	1.00
R2091:Atg14	UTSW	14	47542895	missense	probably damaging	1.00
R2113:Atg14	UTSW	14	47551324	missense	probably damaging	1.00
R4231:Atg14	UTSW	14	47551345	missense	probably benign	0.00
R4233:Atg14	UTSW	14	47551345	missense	probably benign	0.00
R4234:Atg14	UTSW	14	47551345	missense	probably benign	0.00
R4236:Atg14	UTSW	14	47551345	missense	probably benign	0.00
R4360:Atg14	UTSW	14	47568370	missense	probably benign	0.00
R4711:Atg14	UTSW	14	47545841	missense	probably damaging	1.00
R4883:Atg14	UTSW	14	47551314	missense	probably damaging	1.00
R5025:Atg14	UTSW	14	47545816	missense	probably damaging	1.00
R5235:Atg14	UTSW	14	47568199	missense	probably damaging	0.98
R5250:Atg14	UTSW	14	47568199	missense	probably damaging	0.98
R5297:Atg14	UTSW	14	47568199	missense	probably damaging	0.98
R5301:Atg14	UTSW	14	47568199	missense	probably damaging	0.98
R5338:Atg14	UTSW	14	47568199	missense	probably damaging	0.98
R5450:Atg14	UTSW	14	47551464	missense	probably benign
R5475:Atg14	UTSW	14	47568336	missense	possibly damaging	0.83
R5799:Atg14	UTSW	14	47547295	missense	possibly damaging	0.63
R6489:Atg14	UTSW	14	47549023	missense	probably damaging	0.97
R7589:Atg14	UTSW	14	47543090	missense	probably benign	0.00
R7908:Atg14	UTSW	14	47568593	unclassified	probably benign
R9478:Atg14	UTSW	14	47545681	missense	probably damaging	1.00
R9643:Atg14	UTSW	14	47551323	missense	probably damaging	0.99
Z1088:Atg14	UTSW	14	47568292	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ATGAGGCCCAGTAAAAGTGC -3'
(R):5'- AGTGAAGTTCCTCTGCGTG -3'

Sequencing Primer
(F):5'- GCCCAGTAAAAGTGCTGAAC -3'
(R):5'- GAAGTTCCTCTGCGTGCACAC -3'

Posted On

2015-06-12