Incidental Mutation 'R4282:Ppp4r3c1'
ID 322973
Institutional Source Beutler Lab
Gene Symbol Ppp4r3c1
Ensembl Gene ENSMUSG00000035387
Gene Name protein phosphatase 4 regulatory subunit 3C1
Synonyms 4930415L06Rik
MMRRC Submission 041650-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.182) question?
Stock # R4282 (G1)
Quality Score 222
Status Validated
Chromosome X
Chromosomal Location 88973704-88976458 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 88976105 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tryptophan to Arginine at position 31 (W31R)
Ref Sequence ENSEMBL: ENSMUSP00000085471 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000088146]
AlphaFold Q3V0Y1
Predicted Effect probably damaging
Transcript: ENSMUST00000088146
AA Change: W31R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000085471
Gene: ENSMUSG00000035387
AA Change: W31R

DomainStartEndE-ValueType
SCOP:d1k5db_ 18 107 1e-22 SMART
Pfam:SMK-1 178 369 9e-72 PFAM
low complexity region 650 663 N/A INTRINSIC
low complexity region 692 707 N/A INTRINSIC
low complexity region 774 791 N/A INTRINSIC
low complexity region 793 806 N/A INTRINSIC
Meta Mutation Damage Score 0.1201 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.5%
  • 20x: 95.7%
Validation Efficiency 97% (59/61)
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700092K14Rik A C 11: 114,089,970 (GRCm39) noncoding transcript Het
Abca17 G T 17: 24,518,034 (GRCm39) D758E possibly damaging Het
Adam28 A G 14: 68,885,155 (GRCm39) V65A possibly damaging Het
Adgra2 T A 8: 27,609,272 (GRCm39) M616K possibly damaging Het
Aldh3b2 A G 19: 4,027,636 (GRCm39) D59G probably benign Het
Ankrd28 A G 14: 31,467,182 (GRCm39) V260A possibly damaging Het
Bbs7 A G 3: 36,627,720 (GRCm39) V689A probably damaging Het
Cacna1e A G 1: 154,302,296 (GRCm39) F1653S probably benign Het
Cd55b T C 1: 130,344,596 (GRCm39) D213G probably damaging Het
Colgalt2 G A 1: 152,344,282 (GRCm39) V115M probably damaging Het
Ddx60 T C 8: 62,447,427 (GRCm39) V1138A probably damaging Het
Defa27 A G 8: 21,805,632 (GRCm39) N24S probably benign Het
Defb40 A G 8: 19,028,093 (GRCm39) S14P probably damaging Het
Dnmt3a G A 12: 3,951,665 (GRCm39) G681R probably damaging Het
Dus2 C T 8: 106,775,286 (GRCm39) A271V probably benign Het
Fabp3 C T 4: 130,206,245 (GRCm39) probably null Het
Fancg T C 4: 43,003,830 (GRCm39) D533G probably damaging Het
Frem3 T C 8: 81,340,770 (GRCm39) V1021A probably benign Het
Gmip T A 8: 70,266,251 (GRCm39) probably benign Het
Hspb6 T C 7: 30,252,889 (GRCm39) S44P possibly damaging Het
Jsrp1 T C 10: 80,646,190 (GRCm39) I50V probably benign Het
Kansl1 T C 11: 104,269,515 (GRCm39) N476S probably benign Het
Kcnq2 T C 2: 180,722,946 (GRCm39) D810G probably damaging Het
Magea14 T C X: 51,057,867 (GRCm39) Y273C probably damaging Het
Maml2 C A 9: 13,531,406 (GRCm39) L207I possibly damaging Het
Myo3a A T 2: 22,345,089 (GRCm39) E508D probably benign Het
Nav1 T A 1: 135,385,651 (GRCm39) probably benign Het
Ndrg3 A T 2: 156,790,214 (GRCm39) C90S possibly damaging Het
Orc1 A G 4: 108,463,471 (GRCm39) S663G probably benign Het
Pcdhb14 T A 18: 37,583,195 (GRCm39) L767H probably damaging Het
Pcgf1 T A 6: 83,056,714 (GRCm39) L90Q probably damaging Het
Pnma5 T C X: 72,079,036 (GRCm39) M549V probably benign Het
Por C A 5: 135,744,815 (GRCm39) T26K possibly damaging Het
Qsox1 T A 1: 155,662,671 (GRCm39) probably null Het
Rad51ap2 T A 12: 11,506,465 (GRCm39) V129D probably benign Het
Rec8 A G 14: 55,856,091 (GRCm39) H11R probably damaging Het
Rxfp2 T G 5: 149,993,735 (GRCm39) V585G possibly damaging Het
Sftpd G A 14: 40,894,537 (GRCm39) T294I probably benign Het
Sh3gl1 A G 17: 56,343,456 (GRCm39) S2P probably damaging Het
Slc38a10 A T 11: 120,020,090 (GRCm39) F321I probably damaging Het
Slc4a10 T A 2: 62,074,687 (GRCm39) probably null Het
Slco6b1 A G 1: 96,925,115 (GRCm39) noncoding transcript Het
Slit1 T C 19: 41,602,856 (GRCm39) E985G probably benign Het
Smurf1 C T 5: 144,819,403 (GRCm39) E575K probably damaging Het
Sned1 A T 1: 93,213,577 (GRCm39) R426* probably null Het
Tas2r123 G A 6: 132,825,008 (GRCm39) V302I possibly damaging Het
Tmem182 T C 1: 40,877,530 (GRCm39) I135T probably damaging Het
Tmem67 T C 4: 12,073,922 (GRCm39) Y298C probably damaging Het
Trappc9 A G 15: 72,462,641 (GRCm39) C1026R probably damaging Het
Troap A G 15: 98,976,713 (GRCm39) D279G probably benign Het
Ttn T A 2: 76,585,168 (GRCm39) I22042F probably damaging Het
Vmn1r23 T C 6: 57,903,452 (GRCm39) T109A probably benign Het
Vmn2r25 A T 6: 123,800,606 (GRCm39) C579S probably damaging Het
Zbtb18 A G 1: 177,275,045 (GRCm39) D126G probably damaging Het
Other mutations in Ppp4r3c1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02024:Ppp4r3c1 APN X 88,975,129 (GRCm39) missense probably benign 0.17
IGL02226:Ppp4r3c1 APN X 88,975,518 (GRCm39) missense probably damaging 0.99
R1980:Ppp4r3c1 UTSW X 88,975,051 (GRCm39) missense probably damaging 1.00
R1981:Ppp4r3c1 UTSW X 88,975,051 (GRCm39) missense probably damaging 1.00
R1982:Ppp4r3c1 UTSW X 88,975,051 (GRCm39) missense probably damaging 1.00
R2299:Ppp4r3c1 UTSW X 88,976,005 (GRCm39) missense possibly damaging 0.72
R2381:Ppp4r3c1 UTSW X 88,974,116 (GRCm39) missense probably benign 0.34
R2895:Ppp4r3c1 UTSW X 88,976,005 (GRCm39) missense possibly damaging 0.72
R2896:Ppp4r3c1 UTSW X 88,976,005 (GRCm39) missense possibly damaging 0.72
R4001:Ppp4r3c1 UTSW X 88,974,116 (GRCm39) missense probably benign 0.34
R4003:Ppp4r3c1 UTSW X 88,974,116 (GRCm39) missense probably benign 0.34
R4042:Ppp4r3c1 UTSW X 88,975,909 (GRCm39) missense probably damaging 1.00
R4043:Ppp4r3c1 UTSW X 88,975,909 (GRCm39) missense probably damaging 1.00
R4280:Ppp4r3c1 UTSW X 88,976,105 (GRCm39) missense probably damaging 1.00
R4281:Ppp4r3c1 UTSW X 88,976,105 (GRCm39) missense probably damaging 1.00
Z1088:Ppp4r3c1 UTSW X 88,973,843 (GRCm39) missense unknown
Z1088:Ppp4r3c1 UTSW X 88,973,842 (GRCm39) missense unknown
Z1176:Ppp4r3c1 UTSW X 88,973,847 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- CCCAGATCTCTTGACAATCATTTGG -3'
(R):5'- GAATTTTGACTGCGGCAACAG -3'

Sequencing Primer
(F):5'- GGAAATGTATTGCCATGCCG -3'
(R):5'- CAACAGTTCTGGCCAAGGTAGC -3'
Posted On 2015-06-20