Incidental Mutation 'R4295:Vmn1r76'
ID 323254
Institutional Source Beutler Lab
Gene Symbol Vmn1r76
Ensembl Gene ENSMUSG00000115267
Gene Name vomeronasal 1 receptor 76
Synonyms V1rg4
MMRRC Submission 041084-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.097) question?
Stock # R4295 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 11664238-11665212 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 11665057 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Methionine at position 52 (I52M)
Ref Sequence ENSEMBL: ENSMUSP00000055518 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000058772] [ENSMUST00000226300] [ENSMUST00000226947]
AlphaFold F8VQ63
Predicted Effect probably benign
Transcript: ENSMUST00000058772
AA Change: I52M

PolyPhen 2 Score 0.444 (Sensitivity: 0.89; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000055518
Gene: ENSMUSG00000115267
AA Change: I52M

DomainStartEndE-ValueType
transmembrane domain 5 27 N/A INTRINSIC
transmembrane domain 31 53 N/A INTRINSIC
Pfam:V1R 54 317 5.4e-31 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226300
AA Change: I17M

PolyPhen 2 Score 0.426 (Sensitivity: 0.89; Specificity: 0.90)
Predicted Effect probably benign
Transcript: ENSMUST00000226947
AA Change: I17M

PolyPhen 2 Score 0.426 (Sensitivity: 0.89; Specificity: 0.90)
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.5%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4833420G17Rik T C 13: 119,606,249 (GRCm39) S164P probably benign Het
4933427D06Rik A G 6: 89,084,883 (GRCm39) noncoding transcript Het
Aldh1l2 C T 10: 83,331,784 (GRCm39) V674M possibly damaging Het
Angel1 A G 12: 86,767,057 (GRCm39) Y440H probably damaging Het
Atr A G 9: 95,756,479 (GRCm39) I870V probably benign Het
Cd200r4 T C 16: 44,653,239 (GRCm39) V3A probably damaging Het
Celf2 T C 2: 6,608,875 (GRCm39) N302S probably benign Het
Cip2a T A 16: 48,833,612 (GRCm39) F571Y probably benign Het
Dnah17 A T 11: 118,009,598 (GRCm39) I363N probably damaging Het
Fam98a A T 17: 75,848,342 (GRCm39) M124K probably damaging Het
Fhdc1 C A 3: 84,352,133 (GRCm39) V1031F probably benign Het
Foxj3 G T 4: 119,483,494 (GRCm39) G555* probably null Het
Gm4841 T C 18: 60,403,262 (GRCm39) N277S probably benign Het
Kcnv1 G A 15: 44,977,840 (GRCm39) T66M probably damaging Het
Kif18a T C 2: 109,123,398 (GRCm39) V224A probably benign Het
Lamb2 A G 9: 108,363,410 (GRCm39) D863G probably benign Het
Lbr C T 1: 181,648,267 (GRCm39) C398Y probably damaging Het
Lcn11 G A 2: 25,668,111 (GRCm39) A90T possibly damaging Het
Or14c46 A T 7: 85,918,968 (GRCm39) F10I probably damaging Het
Or2v2 T A 11: 49,004,254 (GRCm39) I100L probably benign Het
Or5m3 T C 2: 85,838,614 (GRCm39) Y165H probably benign Het
Or8d2b A G 9: 38,788,609 (GRCm39) I46V probably damaging Het
Or9a4 T A 6: 40,549,090 (GRCm39) F257I probably damaging Het
Pcdhb5 T A 18: 37,455,734 (GRCm39) S705T possibly damaging Het
Pcgf2 A T 11: 97,584,282 (GRCm39) Y24* probably null Het
Phf14 C T 6: 11,987,096 (GRCm39) P559S probably damaging Het
Pigf A G 17: 87,331,184 (GRCm39) I46T probably benign Het
Plpp4 A G 7: 128,909,356 (GRCm39) E22G probably damaging Het
Prdm10 A G 9: 31,227,590 (GRCm39) E65G possibly damaging Het
Sash1 A G 10: 8,606,006 (GRCm39) S795P possibly damaging Het
Slc22a21 T C 11: 53,860,329 (GRCm39) D34G probably damaging Het
Spata13 T A 14: 60,947,004 (GRCm39) M684K probably damaging Het
Srsf6 T C 2: 162,776,636 (GRCm39) probably benign Het
Stk32c T C 7: 138,700,704 (GRCm39) probably null Het
Tjp1 T C 7: 64,972,898 (GRCm39) D514G probably damaging Het
Ttll11 TCGCCGCCGCCGCCGCCGCCGC TCGCCGCCGCCGCCGCCGC 2: 35,869,564 (GRCm39) probably benign Het
Unc13c A G 9: 73,641,786 (GRCm39) S1236P probably damaging Het
Utp20 G T 10: 88,590,381 (GRCm39) D2364E possibly damaging Het
Vmn1r192 T A 13: 22,371,465 (GRCm39) I252F probably damaging Het
Xndc1 T A 7: 101,730,694 (GRCm39) L288M possibly damaging Het
Zfp451 A T 1: 33,816,836 (GRCm39) F154L probably damaging Het
Other mutations in Vmn1r76
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01017:Vmn1r76 APN 7 11,664,309 (GRCm39) missense possibly damaging 0.50
IGL01353:Vmn1r76 APN 7 11,664,737 (GRCm39) missense probably damaging 0.98
IGL02105:Vmn1r76 APN 7 11,664,417 (GRCm39) missense possibly damaging 0.46
R0032:Vmn1r76 UTSW 7 11,665,194 (GRCm39) missense probably benign
R0879:Vmn1r76 UTSW 7 11,664,662 (GRCm39) missense probably benign 0.00
R1201:Vmn1r76 UTSW 7 11,664,252 (GRCm39) missense probably benign 0.38
R1966:Vmn1r76 UTSW 7 11,664,441 (GRCm39) missense probably damaging 1.00
R3030:Vmn1r76 UTSW 7 11,664,402 (GRCm39) missense probably damaging 1.00
R3915:Vmn1r76 UTSW 7 11,664,496 (GRCm39) missense probably benign 0.23
R5053:Vmn1r76 UTSW 7 11,664,241 (GRCm39) splice site probably null
R5450:Vmn1r76 UTSW 7 11,664,611 (GRCm39) missense probably damaging 1.00
R5568:Vmn1r76 UTSW 7 11,665,062 (GRCm39) missense probably benign 0.02
R6382:Vmn1r76 UTSW 7 11,664,426 (GRCm39) missense probably damaging 1.00
R7137:Vmn1r76 UTSW 7 11,664,612 (GRCm39) missense possibly damaging 0.94
R7704:Vmn1r76 UTSW 7 11,664,344 (GRCm39) missense probably benign 0.25
R8018:Vmn1r76 UTSW 7 11,664,810 (GRCm39) missense probably damaging 0.99
R8540:Vmn1r76 UTSW 7 11,664,897 (GRCm39) missense probably damaging 1.00
R9321:Vmn1r76 UTSW 7 11,665,094 (GRCm39) missense possibly damaging 0.78
R9393:Vmn1r76 UTSW 7 11,664,765 (GRCm39) missense probably benign 0.00
Z1176:Vmn1r76 UTSW 7 11,664,495 (GRCm39) missense probably benign 0.36
Predicted Primers PCR Primer
(F):5'- TACTTGGTGGCTCTGTATTTAAACATC -3'
(R):5'- TCTCAGTTAGCATCATGAAACAATG -3'

Sequencing Primer
(F):5'- GGCTCTGTATTTAAACATCATCCATC -3'
(R):5'- GAAAACTTACAATGTGTTTCTCTGG -3'
Posted On 2015-06-20