Mutagenetix > Incidental Mutation

Incidental Mutation 'R4358:Zfp939'

324657

Institutional Source

Beutler Lab

Gene Symbol

Zfp939

Ensembl Gene

ENSMUSG00000030424

Gene Name

zinc finger protein 939

Synonyms

9430025M13Rik

MMRRC Submission

041110-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.130) question?

Stock #

R4358 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

39109240-39124196 bp(+) (GRCm39)

Type of Mutation

exon

DNA Base Change (assembly)

A to G at 39123144 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s):

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000061201

SMART Domains

Protein: ENSMUSP00000049726
Gene: ENSMUSG00000030424

Domain	Start	End	E-Value	Type
KRAB	4	64	9.45e-34	SMART
ZnF_C2H2	221	243	1.1e-2	SMART
ZnF_C2H2	249	271	2.09e-3	SMART
ZnF_C2H2	277	299	8.94e-3	SMART
ZnF_C2H2	305	327	1.53e-1	SMART
ZnF_C2H2	333	355	4.79e-3	SMART
ZnF_C2H2	361	383	1.25e-1	SMART
ZnF_C2H2	389	411	7.37e-4	SMART
ZnF_C2H2	417	439	2.91e-2	SMART
ZnF_C2H2	445	467	6.42e-4	SMART
ZnF_C2H2	473	495	1.58e-3	SMART
ZnF_C2H2	501	523	1.2e-3	SMART
ZnF_C2H2	529	551	1.53e-1	SMART
ZnF_C2H2	557	579	3.63e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000186855

Meta Mutation Damage Score

0.0869

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.5%
20x: 95.8%

Validation Efficiency

98% (48/49)

Allele List at MGI

Other mutations in this stock

Total: 41 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Alpk1	C	T	3: 127,523,022 (GRCm39)	V7M	probably damaging	Het
Birc6	T	A	17: 74,926,663 (GRCm39)		probably null	Het
Chil3	G	A	3: 106,067,815 (GRCm39)	Q117*	probably null	Het
Daglb	T	C	5: 143,458,889 (GRCm39)		probably benign	Het
Dnah11	G	A	12: 118,089,578 (GRCm39)	R1163*	probably null	Het
Ftsj3	G	A	11: 106,144,502 (GRCm39)	A134V	probably benign	Het
G530012D18Rik	G	C	1: 85,504,923 (GRCm39)		probably benign	Het
Gfod2	T	C	8: 106,444,177 (GRCm39)	N122S	possibly damaging	Het
Golga4	A	G	9: 118,380,946 (GRCm39)	E507G	probably benign	Het
Ids	C	A	X: 69,389,950 (GRCm39)	G506C	probably damaging	Het
Ifna15	G	T	4: 88,476,079 (GRCm39)	T135N	probably benign	Het
Igsf9b	G	A	9: 27,220,774 (GRCm39)	V47I	possibly damaging	Het
Kif24	A	G	4: 41,413,827 (GRCm39)		probably null	Het
L3hypdh	A	T	12: 72,124,198 (GRCm39)	D247E	probably damaging	Het
Lama2	A	T	10: 26,860,489 (GRCm39)	N2999K	probably damaging	Het
Lpcat2	C	A	8: 93,599,734 (GRCm39)	P234Q	probably benign	Het
Lrp10	C	T	14: 54,705,823 (GRCm39)	R338C	probably damaging	Het
Mcm9	A	C	10: 53,413,749 (GRCm39)	C444G	probably benign	Het
Mecom	G	A	3: 30,033,934 (GRCm39)	Q246*	probably null	Het
Mib1	A	G	18: 10,751,844 (GRCm39)	N242S	probably benign	Het
Or2a7	T	A	6: 43,151,160 (GRCm39)	M80K	probably damaging	Het
Or8g26	G	A	9: 39,095,864 (GRCm39)	C127Y	probably damaging	Het
P3h4	A	G	11: 100,304,452 (GRCm39)	F263S	probably damaging	Het
Pcsk1	T	C	13: 75,260,838 (GRCm39)	S354P	possibly damaging	Het
Pms2	T	A	5: 143,862,744 (GRCm39)	F617Y	probably damaging	Het
Prps2	T	A	X: 166,146,545 (GRCm39)	K176*	probably null	Het
Psmd13	G	T	7: 140,469,418 (GRCm39)		probably benign	Het
Pygl	G	A	12: 70,242,464 (GRCm39)	S573L	probably damaging	Het
Rapgef3	A	G	15: 97,646,529 (GRCm39)	V794A	probably benign	Het
Rasgrf2	C	A	13: 92,038,796 (GRCm39)	D1017Y	probably damaging	Het
Rb1cc1	A	G	1: 6,315,861 (GRCm39)	D555G	probably damaging	Het
Rptor	G	T	11: 119,562,171 (GRCm39)	E111D	probably damaging	Het
Sall4	T	C	2: 168,597,400 (GRCm39)	E480G	probably benign	Het
Scn4a	G	A	11: 106,239,683 (GRCm39)		probably null	Het
Scn8a	G	A	15: 100,838,014 (GRCm39)	A94T	probably benign	Het
Slc26a6	T	A	9: 108,738,982 (GRCm39)	C636S	probably benign	Het
Slc38a11	T	C	2: 65,188,460 (GRCm39)	K103R	probably benign	Het
Sned1	T	C	1: 93,202,381 (GRCm39)	L675P	probably benign	Het
Spsb1	T	C	4: 149,991,232 (GRCm39)	H112R	probably damaging	Het
Tmem132d	G	A	5: 128,061,405 (GRCm39)	T399M	possibly damaging	Het
Zfp951	T	C	5: 104,962,541 (GRCm39)	K342E	probably damaging	Het

Other mutations in Zfp939

Allele	Source	Chr	Coord	Type	Predicted Effect
sandiego	UTSW	7	39,122,695 (GRCm39)	exon	noncoding transcript
R0083:Zfp939	UTSW	7	39,123,534 (GRCm39)	exon	noncoding transcript
R0669:Zfp939	UTSW	7	39,123,209 (GRCm39)	exon	noncoding transcript
R1166:Zfp939	UTSW	7	39,122,763 (GRCm39)	exon	noncoding transcript
R1603:Zfp939	UTSW	7	39,122,695 (GRCm39)	exon	noncoding transcript
R1868:Zfp939	UTSW	7	39,122,728 (GRCm39)	exon	noncoding transcript
R3818:Zfp939	UTSW	7	39,122,792 (GRCm39)	exon	noncoding transcript
R4697:Zfp939	UTSW	7	39,122,366 (GRCm39)	exon	noncoding transcript

Predicted Primers

PCR Primer
(F):5'- TTCAGCGCATGCCTCACTAG -3'
(R):5'- AAGTAGAAGGTCTTCCTACAGTGCTC -3'

Sequencing Primer
(F):5'- TAGACACCAGAGGATTCATACAAATG -3'
(R):5'- TTCTGATGTGCAGTAAGCCCAGAC -3'

Posted On

2015-06-24