Incidental Mutation 'R4399:Or1p1'
| ID |
325642 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or1p1
|
| Ensembl Gene |
ENSMUSG00000070374 |
| Gene Name |
olfactory receptor family 1 subfamily P member 1 |
| Synonyms |
MOR133-3P, Olfr59, IH3, GA_x6K02T2P1NL-4434429-4435400 |
| MMRRC Submission |
041686-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.065)
|
| Stock # |
R4399 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
11 |
| Chromosomal Location |
74174562-74180472 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 74179682 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glycine
at position 70
(D70G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000146176
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000143976]
[ENSMUST00000205790]
[ENSMUST00000206659]
[ENSMUST00000214048]
|
| AlphaFold |
B1ARL3 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000119717
AA Change: D70G
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000112522
Gene: ENSMUSG00000070374
AA Change: D70G
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
310 |
2.2e-59 |
PFAM |
|
Pfam:7tm_1
|
41 |
292 |
3.2e-27 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000143976
AA Change: D70G
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000119877
Gene: ENSMUSG00000070374
AA Change: D70G
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_1
|
41 |
237 |
7.5e-34 |
PFAM |
|
Pfam:7tm_4
|
139 |
237 |
1.9e-27 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000205790
AA Change: D70G
PolyPhen 2
Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000206659
AA Change: D70G
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000214048
AA Change: D70G
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| Meta Mutation Damage Score |
0.6467 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.8%
|
| Validation Efficiency |
96% (44/46) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca8b |
T |
C |
11: 109,827,211 (GRCm39) |
T1466A |
possibly damaging |
Het |
| Abcc6 |
T |
C |
7: 45,652,031 (GRCm39) |
N612S |
probably benign |
Het |
| Aga |
T |
C |
8: 53,964,861 (GRCm39) |
S8P |
probably benign |
Het |
| Cep152 |
G |
A |
2: 125,429,900 (GRCm39) |
A674V |
possibly damaging |
Het |
| Chd6 |
T |
C |
2: 160,807,238 (GRCm39) |
H1992R |
probably benign |
Het |
| Cnga1 |
T |
C |
5: 72,761,724 (GRCm39) |
K597E |
probably damaging |
Het |
| Col6a5 |
T |
A |
9: 105,766,164 (GRCm39) |
M1919L |
possibly damaging |
Het |
| Cramp1 |
C |
T |
17: 25,198,559 (GRCm39) |
V788I |
probably damaging |
Het |
| Dnah7a |
T |
C |
1: 53,557,886 (GRCm39) |
Y2176C |
probably damaging |
Het |
| Foxred2 |
A |
C |
15: 77,837,558 (GRCm39) |
V226G |
possibly damaging |
Het |
| Foxred2 |
T |
C |
15: 77,839,880 (GRCm39) |
I137V |
probably benign |
Het |
| G6pd2 |
T |
A |
5: 61,967,516 (GRCm39) |
N430K |
probably benign |
Het |
| Gtf2h3 |
T |
C |
5: 124,740,126 (GRCm39) |
|
probably benign |
Het |
| Ibsp |
T |
A |
5: 104,457,148 (GRCm39) |
S86T |
probably damaging |
Het |
| Igkv6-25 |
T |
A |
6: 70,192,694 (GRCm39) |
S34T |
possibly damaging |
Het |
| Mrc2 |
T |
A |
11: 105,227,484 (GRCm39) |
Y572* |
probably null |
Het |
| Mup18 |
C |
T |
4: 61,590,866 (GRCm39) |
G97D |
probably damaging |
Het |
| Or1j18 |
A |
T |
2: 36,625,242 (GRCm39) |
N303I |
probably benign |
Het |
| Or2ag2 |
G |
T |
7: 106,485,660 (GRCm39) |
D121E |
probably damaging |
Het |
| Or4k40 |
T |
G |
2: 111,251,144 (GRCm39) |
I51L |
probably benign |
Het |
| Prkcz |
A |
T |
4: 155,353,534 (GRCm39) |
I454N |
possibly damaging |
Het |
| Prrg3 |
A |
T |
X: 71,010,915 (GRCm39) |
S141C |
probably damaging |
Het |
| Ralgapa1 |
T |
A |
12: 55,842,563 (GRCm39) |
|
probably null |
Het |
| Ryr3 |
A |
T |
2: 112,777,189 (GRCm39) |
S323T |
probably benign |
Het |
| Sbpl |
A |
G |
17: 24,173,860 (GRCm39) |
L8P |
unknown |
Het |
| Setd1b |
C |
T |
5: 123,299,861 (GRCm39) |
|
probably benign |
Het |
| Sh2d3c |
G |
A |
2: 32,636,172 (GRCm39) |
G332D |
probably damaging |
Het |
| Slc2a7 |
A |
G |
4: 150,243,007 (GRCm39) |
E276G |
probably damaging |
Het |
| Slc35b3 |
A |
G |
13: 39,121,791 (GRCm39) |
F73L |
possibly damaging |
Het |
| Sstr3 |
T |
G |
15: 78,424,324 (GRCm39) |
D141A |
probably damaging |
Het |
| St8sia5 |
T |
C |
18: 77,340,714 (GRCm39) |
C191R |
probably damaging |
Het |
| Sult1c2 |
T |
C |
17: 54,269,538 (GRCm39) |
N230S |
probably benign |
Het |
| Thrap3 |
A |
G |
4: 126,060,872 (GRCm39) |
|
probably benign |
Het |
| Tma16 |
C |
T |
8: 66,936,823 (GRCm39) |
|
probably null |
Het |
| Tmem151a |
A |
G |
19: 5,133,099 (GRCm39) |
S36P |
probably damaging |
Het |
| Vmn1r67 |
A |
G |
7: 10,181,476 (GRCm39) |
T247A |
possibly damaging |
Het |
| Vmn2r50 |
A |
G |
7: 9,781,834 (GRCm39) |
S304P |
possibly damaging |
Het |
| Vmn2r68 |
TCC |
TC |
7: 84,870,758 (GRCm39) |
|
probably null |
Het |
| Vmn2r72 |
T |
C |
7: 85,387,708 (GRCm39) |
N619D |
probably damaging |
Het |
| Xab2 |
C |
A |
8: 3,664,244 (GRCm39) |
|
probably null |
Het |
|
| Other mutations in Or1p1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00227:Or1p1
|
APN |
11 |
74,179,952 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00337:Or1p1
|
APN |
11 |
74,180,213 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL01307:Or1p1
|
APN |
11 |
74,180,254 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL01488:Or1p1
|
APN |
11 |
74,179,514 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02583:Or1p1
|
APN |
11 |
74,180,330 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02839:Or1p1
|
APN |
11 |
74,180,196 (GRCm39) |
nonsense |
probably null |
|
|
IGL02996:Or1p1
|
APN |
11 |
74,179,991 (GRCm39) |
missense |
probably benign |
0.08 |
|
R0013:Or1p1
|
UTSW |
11 |
74,179,877 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R0077:Or1p1
|
UTSW |
11 |
74,179,501 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0078:Or1p1
|
UTSW |
11 |
74,180,092 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0734:Or1p1
|
UTSW |
11 |
74,179,772 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1033:Or1p1
|
UTSW |
11 |
74,179,492 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1556:Or1p1
|
UTSW |
11 |
74,179,762 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1721:Or1p1
|
UTSW |
11 |
74,180,126 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1737:Or1p1
|
UTSW |
11 |
74,179,637 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1848:Or1p1
|
UTSW |
11 |
74,180,039 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1881:Or1p1
|
UTSW |
11 |
74,179,492 (GRCm39) |
missense |
probably benign |
0.08 |
|
R2057:Or1p1
|
UTSW |
11 |
74,179,652 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2107:Or1p1
|
UTSW |
11 |
74,180,216 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4633:Or1p1
|
UTSW |
11 |
74,180,120 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5593:Or1p1
|
UTSW |
11 |
74,179,618 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R5988:Or1p1
|
UTSW |
11 |
74,179,679 (GRCm39) |
missense |
probably benign |
|
|
R6104:Or1p1
|
UTSW |
11 |
74,180,192 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7436:Or1p1
|
UTSW |
11 |
74,179,511 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R7506:Or1p1
|
UTSW |
11 |
74,179,949 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R7769:Or1p1
|
UTSW |
11 |
74,179,589 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8247:Or1p1
|
UTSW |
11 |
74,180,315 (GRCm39) |
missense |
noncoding transcript |
|
|
R8709:Or1p1
|
UTSW |
11 |
74,180,054 (GRCm39) |
missense |
possibly damaging |
0.76 |
|
R8900:Or1p1
|
UTSW |
11 |
74,180,413 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9010:Or1p1
|
UTSW |
11 |
74,180,305 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9147:Or1p1
|
UTSW |
11 |
74,180,169 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R9148:Or1p1
|
UTSW |
11 |
74,180,169 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R9719:Or1p1
|
UTSW |
11 |
74,180,146 (GRCm39) |
missense |
probably damaging |
0.97 |
|
Z1088:Or1p1
|
UTSW |
11 |
74,179,661 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- AGACCAGCACCTTTGAGTTC -3'
(R):5'- CGCTGGAAGCTCATGATCATC -3'
Sequencing Primer
(F):5'- TGAGTTCCTCCTCTGGGGAC -3'
(R):5'- GCTCATGATCATCCTATAGTGGAGAG -3'
|
| Posted On |
2015-07-06 |
Incidental Mutation