Mutagenetix > Incidental Mutation

Incidental Mutation 'R4364:Taar8c'

325675

Institutional Source

Beutler Lab

Gene Symbol

Taar8c

Ensembl Gene

ENSMUSG00000100004

Gene Name

trace amine-associated receptor 8C

Synonyms

MMRRC Submission

041672-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.098) question?

Stock #

R4364 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

23976776-23977810 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 23977477 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Methionine at position 112 (V112M)

Ref Sequence

ENSEMBL: ENSMUSP00000133193 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000170267]

AlphaFold

Q5QD05

Predicted Effect

probably benign
Transcript: ENSMUST00000170267
AA Change: V112M

PolyPhen 2 Score 0.024 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000133193
Gene: ENSMUSG00000100004
AA Change: V112M

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	40	244	2.7e-8	PFAM
Pfam:7TM_GPCR_Srsx	42	327	4.9e-15	PFAM
Pfam:7tm_1	48	312	2.3e-57	PFAM

Meta Mutation Damage Score

0.3416

Coding Region Coverage

1x: 99.3%
3x: 98.5%
10x: 96.8%
20x: 93.8%

Validation Efficiency

93% (40/43)

Allele List at MGI

Other mutations in this stock

Total: 34 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Amn	A	C	12: 111,238,196 (GRCm39)	N37H	probably damaging	Het
Apoa5	A	T	9: 46,181,827 (GRCm39)	D301V	probably damaging	Het
Atrn	A	G	2: 130,812,128 (GRCm39)	E691G	probably benign	Het
Ccer1	CGAGGAGGAGGAGGAGGAGGA	CGAGGAGGAGGAGGAGGA	10: 97,530,232 (GRCm39)		probably benign	Het
Cct2	A	G	10: 116,891,056 (GRCm39)	V396A	probably damaging	Het
Dhx35	C	T	2: 158,684,272 (GRCm39)	Q516*	probably null	Het
Dop1b	A	G	16: 93,567,812 (GRCm39)	K1413R	probably benign	Het
Dpp9	T	C	17: 56,494,391 (GRCm39)	H856R	possibly damaging	Het
Eif4e2	T	C	1: 87,152,093 (GRCm39)	F97L	probably benign	Het
Exoc6b	A	T	6: 84,980,161 (GRCm39)		probably benign	Het
Fat1	T	A	8: 45,405,999 (GRCm39)	S917T	probably benign	Het
Frem1	A	T	4: 82,831,488 (GRCm39)	Y2043N	probably damaging	Het
Galnt14	A	G	17: 73,819,154 (GRCm39)	I312T	probably damaging	Het
Glipr1	T	C	10: 111,821,542 (GRCm39)	N220S	possibly damaging	Het
Grid1	A	G	14: 34,667,989 (GRCm39)	E172G	probably benign	Het
Hspa4l	C	A	3: 40,721,241 (GRCm39)		probably null	Het
Il1rl2	G	T	1: 40,390,951 (GRCm39)	R298L	probably benign	Het
Il7r	T	A	15: 9,513,014 (GRCm39)	H165L	probably damaging	Het
Krt87	T	G	15: 101,385,395 (GRCm39)	M326L	probably benign	Het
Lcn10	G	T	2: 25,574,052 (GRCm39)	C85F	probably damaging	Het
Mideas	C	T	12: 84,203,245 (GRCm39)	G886S	probably benign	Het
Nup205	C	A	6: 35,168,962 (GRCm39)	P397Q	probably benign	Het
Or4d10	A	G	19: 12,051,861 (GRCm39)	V45A	probably benign	Het
Or4f17-ps1	G	A	2: 111,357,985 (GRCm39)	V127M	probably benign	Het
Or8b12c	A	T	9: 37,715,486 (GRCm39)	H93L	probably benign	Het
Prkce	C	T	17: 86,784,279 (GRCm39)	T218I	probably damaging	Het
Rhbdl2	T	A	4: 123,703,728 (GRCm39)	M1K	probably null	Het
Ripor2	C	T	13: 24,905,694 (GRCm39)	P947S	probably benign	Het
Shoc1	T	G	4: 59,082,294 (GRCm39)	T445P	possibly damaging	Het
Shroom3	G	T	5: 93,090,945 (GRCm39)	V1151F	probably damaging	Het
Sptbn5	A	G	2: 119,899,136 (GRCm39)	L428P	probably damaging	Het
Syne1	A	G	10: 5,303,987 (GRCm39)	V789A	probably damaging	Het
Tex10	T	C	4: 48,468,774 (GRCm39)	I51V	probably benign	Het
Ttll1	T	A	15: 83,384,195 (GRCm39)	Q144L	probably damaging	Het

Other mutations in Taar8c

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00816:Taar8c	APN	10	23,977,173 (GRCm39)	missense	probably damaging	0.99
IGL01733:Taar8c	APN	10	23,977,155 (GRCm39)	missense	possibly damaging	0.86
R0669:Taar8c	UTSW	10	23,977,401 (GRCm39)	missense	probably damaging	1.00
R1186:Taar8c	UTSW	10	23,977,463 (GRCm39)	nonsense	probably null
R1452:Taar8c	UTSW	10	23,977,508 (GRCm39)	missense	probably benign	0.00
R2256:Taar8c	UTSW	10	23,976,969 (GRCm39)	missense	probably benign	0.01
R4904:Taar8c	UTSW	10	23,977,147 (GRCm39)	missense	probably benign	0.01
R5314:Taar8c	UTSW	10	23,977,246 (GRCm39)	missense	probably damaging	1.00
R6163:Taar8c	UTSW	10	23,977,116 (GRCm39)	missense	probably benign	0.00
R6631:Taar8c	UTSW	10	23,977,701 (GRCm39)	missense	probably benign	0.01
R7428:Taar8c	UTSW	10	23,977,446 (GRCm39)	missense	probably damaging	1.00
R7497:Taar8c	UTSW	10	23,977,116 (GRCm39)	missense	probably benign	0.00
R7525:Taar8c	UTSW	10	23,977,764 (GRCm39)	missense	probably benign	0.03
R8122:Taar8c	UTSW	10	23,977,107 (GRCm39)	missense	probably benign	0.14
R8280:Taar8c	UTSW	10	23,976,835 (GRCm39)	missense	probably benign	0.37
R8293:Taar8c	UTSW	10	23,977,015 (GRCm39)	missense	probably benign	0.00
R8772:Taar8c	UTSW	10	23,977,705 (GRCm39)	missense	probably benign
R9165:Taar8c	UTSW	10	23,977,500 (GRCm39)	missense	probably damaging	1.00
Z1177:Taar8c	UTSW	10	23,977,305 (GRCm39)	missense	probably benign	0.37
Z1177:Taar8c	UTSW	10	23,977,148 (GRCm39)	missense	probably benign	0.15

Predicted Primers

PCR Primer
(F):5'- TGTAGAACACTGCACTGCTG -3'
(R):5'- CATCCTGTACATGGTCTATGGC -3'

Sequencing Primer
(F):5'- ACTGCACTGCTGTATACCAGG -3'
(R):5'- ACCTCCTGGTGGTGATTTCAG -3'

Posted On

2015-07-06