Incidental Mutation 'R4421:Or2ag2'
| ID |
327101 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2ag2
|
| Ensembl Gene |
ENSMUSG00000109354 |
| Gene Name |
olfactory receptor family 2 subfamily AG member 2 |
| Synonyms |
MOR283-11, GA_x6K02T2PBJ9-9271198-9270248, Olfr706 |
| MMRRC Submission |
041142-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.289)
|
| Stock # |
R4421 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
106485072-106486022 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to T
at 106485660 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glutamic Acid
at position 121
(D121E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150075
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000052535]
[ENSMUST00000088687]
[ENSMUST00000208759]
[ENSMUST00000209025]
[ENSMUST00000210644]
[ENSMUST00000213251]
[ENSMUST00000213918]
[ENSMUST00000214112]
|
| AlphaFold |
Q9EPF8 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000052535
AA Change: D121E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000057180
Gene: ENSMUSG00000064223
AA Change: D121E
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
4.1e-43 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
9.1e-27 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000088687
|
| SMART Domains |
Protein: ENSMUSP00000086062
Gene: ENSMUSG00000069390
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
2.2e-58 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
303 |
9.1e-9 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.4e-27 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000208759
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000209025
AA Change: D121E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000210644
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213251
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000213918
AA Change: D121E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000214495
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216085
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216099
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214112
|
| Meta Mutation Damage Score |
0.3873 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.4%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acy1 |
G |
C |
9: 106,312,912 (GRCm39) |
|
probably null |
Het |
| Adgrv1 |
T |
C |
13: 81,714,421 (GRCm39) |
E234G |
probably damaging |
Het |
| Aga |
T |
C |
8: 53,964,861 (GRCm39) |
S8P |
probably benign |
Het |
| C1s2 |
T |
C |
6: 124,602,174 (GRCm39) |
D673G |
probably benign |
Het |
| Capza3 |
G |
A |
6: 139,987,768 (GRCm39) |
M122I |
probably benign |
Het |
| Cfap44 |
T |
C |
16: 44,242,800 (GRCm39) |
S735P |
probably damaging |
Het |
| Cntn3 |
A |
G |
6: 102,441,508 (GRCm39) |
F13L |
probably damaging |
Het |
| Col6a5 |
A |
T |
9: 105,805,672 (GRCm39) |
M1078K |
unknown |
Het |
| Colgalt2 |
A |
T |
1: 152,360,763 (GRCm39) |
I267F |
probably damaging |
Het |
| Cpped1 |
T |
C |
16: 11,623,221 (GRCm39) |
*299W |
probably null |
Het |
| Cyp3a59 |
A |
G |
5: 146,041,713 (GRCm39) |
|
probably null |
Het |
| Ddx42 |
T |
A |
11: 106,121,964 (GRCm39) |
Y160N |
probably damaging |
Het |
| Dhx35 |
A |
T |
2: 158,648,321 (GRCm39) |
R60W |
probably damaging |
Het |
| Gbp10 |
T |
C |
5: 105,372,517 (GRCm39) |
|
probably null |
Het |
| Gtf2i |
T |
C |
5: 134,283,891 (GRCm39) |
T467A |
possibly damaging |
Het |
| Hip1r |
G |
C |
5: 124,135,925 (GRCm39) |
G542A |
possibly damaging |
Het |
| Hspg2 |
G |
A |
4: 137,275,433 (GRCm39) |
A2748T |
probably benign |
Het |
| Kcnq3 |
T |
C |
15: 65,867,360 (GRCm39) |
Y761C |
probably benign |
Het |
| Krt13 |
T |
G |
11: 100,009,761 (GRCm39) |
T340P |
possibly damaging |
Het |
| Map2k5 |
A |
G |
9: 63,071,412 (GRCm39) |
C435R |
probably damaging |
Het |
| Ms4a4c |
T |
A |
19: 11,393,739 (GRCm39) |
I53K |
probably damaging |
Het |
| Myh15 |
T |
A |
16: 48,929,707 (GRCm39) |
F544L |
probably damaging |
Het |
| Neurod2 |
G |
T |
11: 98,219,026 (GRCm39) |
S46* |
probably null |
Het |
| Nsd3 |
T |
A |
8: 26,131,288 (GRCm39) |
S218T |
probably damaging |
Het |
| Or4p22 |
A |
T |
2: 88,317,585 (GRCm39) |
N170Y |
probably damaging |
Het |
| Prrc2c |
TTGCTGCTGCTGCTGCTGCTGCTGCTGC |
TTGCTGCTGCTGCTGCTGCTGCTGC |
1: 162,536,630 (GRCm39) |
|
probably benign |
Het |
| Prrg3 |
A |
T |
X: 71,010,915 (GRCm39) |
S141C |
probably damaging |
Het |
| Ranbp17 |
A |
T |
11: 33,425,056 (GRCm39) |
D433E |
probably benign |
Het |
| Rbm28 |
T |
C |
6: 29,154,836 (GRCm39) |
D278G |
probably damaging |
Het |
| Sbpl |
A |
G |
17: 24,173,860 (GRCm39) |
L8P |
unknown |
Het |
| Spopl |
C |
T |
2: 23,407,957 (GRCm39) |
V241M |
probably damaging |
Het |
| Tdrd3 |
A |
G |
14: 87,723,719 (GRCm39) |
E311G |
probably damaging |
Het |
| Tma16 |
C |
T |
8: 66,936,823 (GRCm39) |
|
probably null |
Het |
| Ubr4 |
A |
G |
4: 139,189,167 (GRCm39) |
N3917D |
possibly damaging |
Het |
| Vmn2r68 |
TCC |
TC |
7: 84,870,758 (GRCm39) |
|
probably null |
Het |
| Vmn2r72 |
T |
C |
7: 85,387,708 (GRCm39) |
N619D |
probably damaging |
Het |
| Xab2 |
C |
A |
8: 3,664,244 (GRCm39) |
|
probably null |
Het |
|
| Other mutations in Or2ag2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02311:Or2ag2
|
APN |
7 |
106,485,101 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03093:Or2ag2
|
APN |
7 |
106,485,410 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL03354:Or2ag2
|
APN |
7 |
106,485,307 (GRCm39) |
missense |
probably benign |
0.07 |
|
R0334:Or2ag2
|
UTSW |
7 |
106,485,622 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1577:Or2ag2
|
UTSW |
7 |
106,485,217 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4083:Or2ag2
|
UTSW |
7 |
106,485,851 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4399:Or2ag2
|
UTSW |
7 |
106,485,660 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5202:Or2ag2
|
UTSW |
7 |
106,485,803 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R6031:Or2ag2
|
UTSW |
7 |
106,485,134 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R6031:Or2ag2
|
UTSW |
7 |
106,485,134 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R6375:Or2ag2
|
UTSW |
7 |
106,485,221 (GRCm39) |
missense |
probably benign |
|
|
R6475:Or2ag2
|
UTSW |
7 |
106,485,604 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7665:Or2ag2
|
UTSW |
7 |
106,485,880 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7742:Or2ag2
|
UTSW |
7 |
106,485,829 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7956:Or2ag2
|
UTSW |
7 |
106,485,178 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R8678:Or2ag2
|
UTSW |
7 |
106,485,280 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1088:Or2ag2
|
UTSW |
7 |
106,485,503 (GRCm39) |
missense |
probably damaging |
0.98 |
|
| Predicted Primers |
PCR Primer
(F):5'- CTACACAGGACAGCTTCAGC -3'
(R):5'- ACCCATGTACCTCCTACTGAG -3'
Sequencing Primer
(F):5'- GCTTCAGCAAAGGCAGGATCTC -3'
(R):5'- GAGGCAGCTGTCTCTCATTGAC -3'
|
| Posted On |
2015-07-07 |
Incidental Mutation