Incidental Mutation 'R4355:Klrc3'
ID 327483
Institutional Source Beutler Lab
Gene Symbol Klrc3
Ensembl Gene ENSMUSG00000033027
Gene Name killer cell lectin-like receptor subfamily C, member 3
Synonyms NKG2E
MMRRC Submission 041108-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.054) question?
Stock # R4355 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 129639064-129643337 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 129639162 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Methionine to Valine at position 189 (M189V)
Ref Sequence ENSEMBL: ENSMUSP00000129830 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071149] [ENSMUST00000170148] [ENSMUST00000203189]
AlphaFold Q9QXN7
Predicted Effect probably benign
Transcript: ENSMUST00000071149
AA Change: M197V

PolyPhen 2 Score 0.093 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000071147
Gene: ENSMUSG00000033027
AA Change: M197V

DomainStartEndE-ValueType
transmembrane domain 66 88 N/A INTRINSIC
CLECT 105 216 1.96e-18 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000170148
AA Change: M189V

PolyPhen 2 Score 0.093 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000129830
Gene: ENSMUSG00000033027
AA Change: M189V

DomainStartEndE-ValueType
transmembrane domain 66 88 N/A INTRINSIC
CLECT 97 208 1.96e-18 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000203189
SMART Domains Protein: ENSMUSP00000144993
Gene: ENSMUSG00000033027

DomainStartEndE-ValueType
transmembrane domain 66 88 N/A INTRINSIC
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.9%
Validation Efficiency 100% (57/57)
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam26a T G 8: 43,570,185 Q89H probably benign Het
Adgrb1 T C 15: 74,543,662 F697S probably damaging Het
Adgrl2 A T 3: 148,839,152 V769E probably damaging Het
Aldh7a1 A T 18: 56,548,494 F173L probably null Het
Arntl A G 7: 113,303,406 I421V possibly damaging Het
Bcl3 G T 7: 19,811,580 C208* probably null Het
Casz1 T C 4: 148,952,335 S1685P unknown Het
Cep250 A G 2: 155,991,525 E1789G probably damaging Het
Cep76 A T 18: 67,626,640 D334E probably benign Het
Clca3b A T 3: 144,825,458 probably null Het
Col9a3 A G 2: 180,606,478 S208G probably benign Het
Ddx47 T C 6: 135,021,505 V388A probably benign Het
Dync1h1 C T 12: 110,632,899 A1896V possibly damaging Het
Eif2ak2 T A 17: 78,858,534 R411S probably benign Het
F7 A G 8: 13,034,774 T267A probably benign Het
Fras1 C A 5: 96,700,242 D1770E probably benign Het
G2e3 T A 12: 51,365,337 Y387N probably benign Het
Hspg2 C T 4: 137,529,418 L1491F probably damaging Het
Ighv3-4 T C 12: 114,253,640 I110M probably benign Het
Itgb5 T A 16: 33,844,997 C28S probably damaging Het
Kbtbd11 C A 8: 15,028,578 N392K probably damaging Het
Kcnmb4 A G 10: 116,473,284 S80P possibly damaging Het
Kif21a C T 15: 90,970,833 C721Y probably benign Het
Kirrel C T 3: 87,089,151 M380I probably null Het
Macf1 T A 4: 123,475,091 E394V possibly damaging Het
Mrgprb4 C T 7: 48,198,701 G160R possibly damaging Het
Myb A G 10: 21,152,617 S116P probably damaging Het
Nf2 G A 11: 4,780,613 Q513* probably null Het
Nmnat3 C T 9: 98,410,152 T150M possibly damaging Het
Olfr361 C A 2: 37,084,930 V273F probably benign Het
Olfr743 T C 14: 50,533,759 C116R possibly damaging Het
Patj T G 4: 98,650,454 C210W possibly damaging Het
Pde3b A G 7: 114,416,287 H246R probably benign Het
Pnp2 A G 14: 50,959,625 H56R probably benign Het
Prkg1 A G 19: 30,569,229 probably benign Het
Rhbdf1 C T 11: 32,216,236 S8N probably damaging Het
Rimbp3 A G 16: 17,209,692 K327E possibly damaging Het
Rnf219 A G 14: 104,479,257 V560A probably benign Het
Rsph6a T A 7: 19,067,078 probably null Het
Ryr2 T C 13: 11,649,812 N3535S probably benign Het
Ssfa2 A G 2: 79,641,998 N132S probably benign Het
Ston1 T G 17: 88,637,008 V614G probably damaging Het
Svep1 T A 4: 58,138,695 T466S possibly damaging Het
Tas2r109 A T 6: 132,980,181 I262N probably benign Het
Tmtc1 T C 6: 148,355,098 probably benign Het
Tshz2 G A 2: 169,884,938 E16K possibly damaging Het
Ufsp2 T A 8: 45,985,465 S193R possibly damaging Het
Ugt2b5 C A 5: 87,139,763 E182* probably null Het
Usp43 A G 11: 67,891,464 V376A probably benign Het
Utp15 A T 13: 98,259,247 F76I possibly damaging Het
Wdr62 A C 7: 30,242,248 L1141R probably damaging Het
Zfp418 T A 7: 7,172,162 M18K probably benign Het
Other mutations in Klrc3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00754:Klrc3 APN 6 129641426 missense probably damaging 1.00
IGL01311:Klrc3 APN 6 129641412 missense probably damaging 1.00
IGL02634:Klrc3 APN 6 129643208 missense probably damaging 0.99
IGL02806:Klrc3 APN 6 129639102 missense possibly damaging 0.52
R1568:Klrc3 UTSW 6 129639547 missense probably benign 0.01
R2132:Klrc3 UTSW 6 129641538 missense probably benign
R2517:Klrc3 UTSW 6 129639557 missense probably damaging 1.00
R3833:Klrc3 UTSW 6 129643218 missense probably damaging 0.99
R5085:Klrc3 UTSW 6 129639575 missense probably damaging 0.99
R5247:Klrc3 UTSW 6 129641462 missense probably damaging 1.00
R5426:Klrc3 UTSW 6 129641550 missense probably benign 0.04
R7557:Klrc3 UTSW 6 129639144 missense probably damaging 0.99
R9168:Klrc3 UTSW 6 129639179 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TGGGCTTACTATACTCCAATGC -3'
(R):5'- AGGATGCTATTGCTGACATTCATG -3'

Sequencing Primer
(F):5'- TGCTTGTTTTTGAAAGAAATGTGTC -3'
(R):5'- GCTATTGCTGACATTCATGACTTG -3'
Posted On 2015-07-07