Incidental Mutation 'R4406:Slco2b1'
ID 327658
Institutional Source Beutler Lab
Gene Symbol Slco2b1
Ensembl Gene ENSMUSG00000030737
Gene Name solute carrier organic anion transporter family, member 2b1
Synonyms OATP-B, Slc21a9
MMRRC Submission 041688-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4406 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 99307011-99360547 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 99314096 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Threonine at position 496 (S496T)
Ref Sequence ENSEMBL: ENSMUSP00000102703 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000032985] [ENSMUST00000107086] [ENSMUST00000107088]
AlphaFold Q8BXB6
Predicted Effect probably benign
Transcript: ENSMUST00000032985
AA Change: S486T

PolyPhen 2 Score 0.217 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000032985
Gene: ENSMUSG00000030737
AA Change: S486T

DomainStartEndE-ValueType
Pfam:OATP 40 637 9.3e-189 PFAM
Pfam:MFS_1 44 468 1.9e-17 PFAM
transmembrane domain 640 662 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000107086
AA Change: S486T

PolyPhen 2 Score 0.217 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000102701
Gene: ENSMUSG00000030737
AA Change: S486T

DomainStartEndE-ValueType
Pfam:OATP 40 637 9.3e-189 PFAM
Pfam:MFS_1 44 468 1.9e-17 PFAM
transmembrane domain 640 662 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000107088
AA Change: S496T

PolyPhen 2 Score 0.217 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000102703
Gene: ENSMUSG00000030737
AA Change: S496T

DomainStartEndE-ValueType
Pfam:OATP 52 646 3.6e-182 PFAM
Pfam:MFS_1 53 476 2e-17 PFAM
transmembrane domain 650 672 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127834
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131160
Predicted Effect noncoding transcript
Transcript: ENSMUST00000148972
Predicted Effect unknown
Transcript: ENSMUST00000154295
AA Change: S15T
SMART Domains Protein: ENSMUSP00000121002
Gene: ENSMUSG00000030737
AA Change: S15T

DomainStartEndE-ValueType
Pfam:OATP 5 166 1.3e-41 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000208024
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.1%
Validation Efficiency 100% (45/45)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This locus encodes a member of the organic anion-transporting polypeptide family of membrane proteins. The protein encoded by this locus may function in regulation of placental uptake of sulfated steroids. Alternatively spliced transcript variants have been described. [provided by RefSeq, Nov 2010]
Allele List at MGI

All alleles(1) : Targeted, other(1)

Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acaca C T 11: 84,171,275 (GRCm39) L1170F probably benign Het
Acss3 A T 10: 106,889,198 (GRCm39) D207E probably damaging Het
Adgrl1 T C 8: 84,656,671 (GRCm39) S325P probably damaging Het
Ankrd37 A G 8: 46,450,131 (GRCm39) probably benign Het
Atp13a2 C T 4: 140,733,787 (GRCm39) P1059S probably damaging Het
Camkv T C 9: 107,823,418 (GRCm39) probably null Het
Ces1f T C 8: 93,989,950 (GRCm39) T387A probably benign Het
Dmxl1 T A 18: 50,022,620 (GRCm39) L1653I probably damaging Het
Fabp3 C T 4: 130,206,180 (GRCm39) T57I probably benign Het
Fat2 G A 11: 55,153,094 (GRCm39) A3706V probably benign Het
Fbln1 T A 15: 85,115,757 (GRCm39) probably null Het
Gm1527 G A 3: 28,949,874 (GRCm39) V45M possibly damaging Het
Gm5084 A G 13: 60,360,380 (GRCm39) noncoding transcript Het
Itpr1 T A 6: 108,331,624 (GRCm39) H194Q probably damaging Het
Kif24 A T 4: 41,393,954 (GRCm39) L973Q probably damaging Het
Lrfn4 T C 19: 4,663,299 (GRCm39) T412A probably benign Het
Ly75 T C 2: 60,184,894 (GRCm39) E420G probably damaging Het
Map3k12 T C 15: 102,413,837 (GRCm39) T45A probably damaging Het
Mib1 A C 18: 10,763,289 (GRCm39) K446N probably damaging Het
Mrpl4 T C 9: 20,918,231 (GRCm39) W146R probably damaging Het
Myof A G 19: 37,911,426 (GRCm39) S1502P probably damaging Het
Nomo1 A G 7: 45,706,092 (GRCm39) N482S probably benign Het
Or2y1 G A 11: 49,385,744 (GRCm39) R128H probably benign Het
Or5b105 A G 19: 13,079,958 (GRCm39) S237P possibly damaging Het
Or5b96 A T 19: 12,867,598 (GRCm39) Y114* probably null Het
Or8g21 T C 9: 38,905,865 (GRCm39) I289V possibly damaging Het
Or9s15 T A 1: 92,525,036 (GRCm39) M265K possibly damaging Het
Osbpl10 C T 9: 114,938,549 (GRCm39) H70Y probably damaging Het
Pdilt A C 7: 119,094,232 (GRCm39) S340A probably damaging Het
Ppan C A 9: 20,802,288 (GRCm39) D226E probably damaging Het
Rufy4 T C 1: 74,186,822 (GRCm39) C537R probably damaging Het
Sema3g G A 14: 30,950,116 (GRCm39) V766M probably benign Het
Skint6 T A 4: 113,013,683 (GRCm39) N356I probably benign Het
Trak1 T C 9: 121,260,602 (GRCm39) V11A probably damaging Het
Ubqlnl C T 7: 103,798,925 (GRCm39) V191M probably benign Het
Umod G A 7: 119,065,287 (GRCm39) P581S probably damaging Het
Zfat A G 15: 68,052,040 (GRCm39) S585P probably benign Het
Zfp472 C A 17: 33,197,134 (GRCm39) T403N probably benign Het
Zfp936 A G 7: 42,839,748 (GRCm39) Q405R possibly damaging Het
Other mutations in Slco2b1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00435:Slco2b1 APN 7 99,309,259 (GRCm39) nonsense probably null
IGL00469:Slco2b1 APN 7 99,309,318 (GRCm39) missense probably benign 0.21
IGL02625:Slco2b1 APN 7 99,309,330 (GRCm39) splice site probably null
IGL03164:Slco2b1 APN 7 99,334,743 (GRCm39) missense probably damaging 0.97
3-1:Slco2b1 UTSW 7 99,334,700 (GRCm39) missense probably damaging 1.00
R0076:Slco2b1 UTSW 7 99,334,708 (GRCm39) nonsense probably null
R0370:Slco2b1 UTSW 7 99,339,644 (GRCm39) missense probably damaging 1.00
R0469:Slco2b1 UTSW 7 99,310,743 (GRCm39) missense probably benign 0.30
R0510:Slco2b1 UTSW 7 99,310,743 (GRCm39) missense probably benign 0.30
R1456:Slco2b1 UTSW 7 99,314,114 (GRCm39) missense probably null
R1868:Slco2b1 UTSW 7 99,335,243 (GRCm39) missense probably damaging 1.00
R2046:Slco2b1 UTSW 7 99,339,686 (GRCm39) missense probably damaging 0.98
R4030:Slco2b1 UTSW 7 99,332,032 (GRCm39) missense probably damaging 1.00
R4166:Slco2b1 UTSW 7 99,309,333 (GRCm39) missense probably benign 0.30
R4643:Slco2b1 UTSW 7 99,316,214 (GRCm39) missense probably benign 0.00
R4770:Slco2b1 UTSW 7 99,320,156 (GRCm39) critical splice donor site probably null
R4927:Slco2b1 UTSW 7 99,335,195 (GRCm39) missense probably damaging 0.99
R5033:Slco2b1 UTSW 7 99,309,256 (GRCm39) missense probably benign 0.14
R5166:Slco2b1 UTSW 7 99,338,220 (GRCm39) missense possibly damaging 0.50
R5306:Slco2b1 UTSW 7 99,338,198 (GRCm39) missense possibly damaging 0.79
R5358:Slco2b1 UTSW 7 99,309,251 (GRCm39) missense unknown
R5389:Slco2b1 UTSW 7 99,335,132 (GRCm39) missense probably damaging 0.98
R5874:Slco2b1 UTSW 7 99,316,301 (GRCm39) missense probably benign
R6151:Slco2b1 UTSW 7 99,339,770 (GRCm39) missense possibly damaging 0.46
R6163:Slco2b1 UTSW 7 99,338,106 (GRCm39) missense probably damaging 1.00
R6192:Slco2b1 UTSW 7 99,334,779 (GRCm39) missense probably damaging 1.00
R6489:Slco2b1 UTSW 7 99,339,762 (GRCm39) nonsense probably null
R6651:Slco2b1 UTSW 7 99,316,376 (GRCm39) missense probably benign 0.09
R7135:Slco2b1 UTSW 7 99,344,270 (GRCm39) missense probably null 0.03
R7322:Slco2b1 UTSW 7 99,341,055 (GRCm39) missense not run
R7353:Slco2b1 UTSW 7 99,339,764 (GRCm39) missense possibly damaging 0.77
R7474:Slco2b1 UTSW 7 99,314,039 (GRCm39) missense probably damaging 1.00
R7888:Slco2b1 UTSW 7 99,338,050 (GRCm39) missense unknown
R8121:Slco2b1 UTSW 7 99,334,760 (GRCm39) missense probably benign 0.00
R8751:Slco2b1 UTSW 7 99,309,259 (GRCm39) nonsense probably null
R9031:Slco2b1 UTSW 7 99,338,214 (GRCm39) missense probably damaging 1.00
R9068:Slco2b1 UTSW 7 99,320,171 (GRCm39) missense probably benign 0.17
R9725:Slco2b1 UTSW 7 99,335,265 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- AGTGACAGGCAGCATGTGTG -3'
(R):5'- TTGAAAGGGCACTCCACAGC -3'

Sequencing Primer
(F):5'- CAGGCAGCATGTGTGATAGG -3'
(R):5'- GGAAAGTTCCTTAAGCGGTTCTCC -3'
Posted On 2015-07-07