Incidental Mutation 'R4431:Wnt2b'
ID 328598
Institutional Source Beutler Lab
Gene Symbol Wnt2b
Ensembl Gene ENSMUSG00000027840
Gene Name wingless-type MMTV integration site family, member 2B
Synonyms Wnt13
MMRRC Submission 041146-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4431 (G1)
Quality Score 225
Status Validated
Chromosome 3
Chromosomal Location 104852588-104869237 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 104860256 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Serine at position 217 (L217S)
Ref Sequence ENSEMBL: ENSMUSP00000029429 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029429]
AlphaFold O70283
Predicted Effect probably damaging
Transcript: ENSMUST00000029429
AA Change: L217S

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000029429
Gene: ENSMUSG00000027840
AA Change: L217S

DomainStartEndE-ValueType
low complexity region 10 28 N/A INTRINSIC
low complexity region 37 50 N/A INTRINSIC
WNT1 72 378 2.03e-189 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200502
Meta Mutation Damage Score 0.8391 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 95.3%
Validation Efficiency 100% (52/52)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the wingless-type MMTV integration site (WNT) family of highly conserved, secreted signaling factors. WNT family members function in a variety of developmental processes including regulation of cell growth and differentiation and are characterized by a WNT-core domain. This gene may play a role in human development as well as carcinogenesis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2014]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit no discernable phenotype. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
0610040J01Rik G T 5: 64,056,182 (GRCm39) probably benign Het
2510039O18Rik T C 4: 148,026,022 (GRCm39) S181P probably benign Het
4930522L14Rik A T 5: 109,884,440 (GRCm39) C473S possibly damaging Het
4930523C07Rik A T 1: 159,872,149 (GRCm39) noncoding transcript Het
Aak1 A G 6: 86,963,300 (GRCm39) K910R unknown Het
Abca2 A G 2: 25,332,864 (GRCm39) D1521G probably benign Het
Adamts20 C A 15: 94,241,924 (GRCm39) D695Y probably damaging Het
Bag4 C T 8: 26,259,516 (GRCm39) A228T probably benign Het
Bltp3a A G 17: 28,104,905 (GRCm39) N533S probably damaging Het
Bspry T A 4: 62,400,904 (GRCm39) I132N possibly damaging Het
Cfap300 A G 9: 8,027,178 (GRCm39) V120A probably damaging Het
Cfh T C 1: 140,064,004 (GRCm39) Y424C probably damaging Het
Chd2 T C 7: 73,085,709 (GRCm39) R1642G possibly damaging Het
Chrm2 A G 6: 36,501,097 (GRCm39) D318G probably benign Het
Chrna4 A G 2: 180,670,413 (GRCm39) S448P probably damaging Het
Cldn8 A C 16: 88,359,619 (GRCm39) M102R probably damaging Het
Dock8 T C 19: 25,042,754 (GRCm39) V112A probably benign Het
Fbxo42 C A 4: 140,927,861 (GRCm39) R714S probably damaging Het
Fmo1 G A 1: 162,661,281 (GRCm39) A334V possibly damaging Het
Gpr68 A T 12: 100,865,650 (GRCm39) probably benign Het
Gramd4 A G 15: 86,014,361 (GRCm39) K345R probably damaging Het
Gtpbp1 T G 15: 79,600,398 (GRCm39) S444A probably damaging Het
Ints12 T C 3: 132,808,242 (GRCm39) Y207H probably damaging Het
Kat2b-ps A T 5: 93,540,443 (GRCm39) noncoding transcript Het
Klhl25 T A 7: 75,515,162 (GRCm39) F23I probably damaging Het
Lamc1 A G 1: 153,097,274 (GRCm39) I1590T probably damaging Het
Lhfpl4 A G 6: 113,170,805 (GRCm39) I127T possibly damaging Het
Lrrc71 A G 3: 87,650,143 (GRCm39) S286P possibly damaging Het
Man1c1 A T 4: 134,430,329 (GRCm39) V151D probably damaging Het
Mipol1 G A 12: 57,350,310 (GRCm39) R36Q possibly damaging Het
Nuggc T A 14: 65,848,659 (GRCm39) W187R probably benign Het
Or4a71 A G 2: 89,357,987 (GRCm39) Y256H probably damaging Het
Pkhd1 G A 1: 20,593,538 (GRCm39) T1525I probably damaging Het
Pomp A G 5: 147,812,289 (GRCm39) E125G probably damaging Het
Ptar1 G T 19: 23,671,695 (GRCm39) G33C probably damaging Het
Ptpn3 A G 4: 57,235,355 (GRCm39) S335P probably damaging Het
Pus7 A G 5: 23,951,487 (GRCm39) Y521H probably benign Het
Shank1 C T 7: 43,969,076 (GRCm39) R324* probably null Het
Slc12a3 A T 8: 95,069,713 (GRCm39) I541F probably damaging Het
Slc12a9 G A 5: 137,319,775 (GRCm39) P580L probably benign Het
Spz1 A G 13: 92,711,837 (GRCm39) L213P probably damaging Het
Strn A G 17: 79,043,891 (GRCm39) V9A probably damaging Het
Sytl5 A T X: 9,826,262 (GRCm39) N412Y probably damaging Het
Tert T A 13: 73,775,594 (GRCm39) F115Y probably damaging Het
Tmem67 T A 4: 12,051,473 (GRCm39) N785I possibly damaging Het
Trf T C 9: 103,089,075 (GRCm39) N243S possibly damaging Het
Ttc3 T C 16: 94,211,817 (GRCm39) probably null Het
Vmn2r22 T C 6: 123,614,817 (GRCm39) T258A possibly damaging Het
Vps13b A C 15: 35,770,899 (GRCm39) Q2114P probably damaging Het
Wdfy1 T A 1: 79,691,583 (GRCm39) R275* probably null Het
Other mutations in Wnt2b
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00229:Wnt2b APN 3 104,860,449 (GRCm39) missense possibly damaging 0.87
IGL02058:Wnt2b APN 3 104,854,408 (GRCm39) missense probably benign 0.04
IGL02638:Wnt2b APN 3 104,862,032 (GRCm39) missense probably benign 0.25
R0881:Wnt2b UTSW 3 104,860,513 (GRCm39) splice site probably benign
R1971:Wnt2b UTSW 3 104,861,933 (GRCm39) splice site probably benign
R2004:Wnt2b UTSW 3 104,860,331 (GRCm39) missense probably damaging 1.00
R5216:Wnt2b UTSW 3 104,868,661 (GRCm39) missense possibly damaging 0.96
R6046:Wnt2b UTSW 3 104,858,339 (GRCm39) missense probably damaging 1.00
R6633:Wnt2b UTSW 3 104,858,372 (GRCm39) missense probably damaging 1.00
R6653:Wnt2b UTSW 3 104,860,502 (GRCm39) missense probably damaging 1.00
R6827:Wnt2b UTSW 3 104,854,408 (GRCm39) missense probably benign 0.04
R7352:Wnt2b UTSW 3 104,854,493 (GRCm39) missense probably benign 0.05
R7634:Wnt2b UTSW 3 104,854,432 (GRCm39) missense probably damaging 1.00
R8099:Wnt2b UTSW 3 104,854,408 (GRCm39) missense possibly damaging 0.48
R8972:Wnt2b UTSW 3 104,858,475 (GRCm39) missense possibly damaging 0.79
X0061:Wnt2b UTSW 3 104,868,676 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- AAGCTCCATGCAGTCTGTGG -3'
(R):5'- CTATCTCGTCAGCAGGAGTG -3'

Sequencing Primer
(F):5'- TCCATGCAGTCTGTGGCAGAAG -3'
(R):5'- GAGTGGTCCACGCTATCACTC -3'
Posted On 2015-07-21