Incidental Mutation 'R4431:Ttc3'
ID |
328633 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ttc3
|
Ensembl Gene |
ENSMUSG00000040785 |
Gene Name |
tetratricopeptide repeat domain 3 |
Synonyms |
D16Ium21e, TPRD, 2610202A04Rik, D16Ium21 |
MMRRC Submission |
041146-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.574)
|
Stock # |
R4431 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
16 |
Chromosomal Location |
94171479-94270081 bp(+) (GRCm39) |
Type of Mutation |
critical splice donor site (2 bp from exon) |
DNA Base Change (assembly) |
T to C
at 94211817 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000156151
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000117648]
[ENSMUST00000117648]
[ENSMUST00000122895]
[ENSMUST00000122895]
[ENSMUST00000139513]
[ENSMUST00000147046]
[ENSMUST00000147046]
[ENSMUST00000147352]
[ENSMUST00000150097]
[ENSMUST00000150097]
[ENSMUST00000153988]
[ENSMUST00000153988]
[ENSMUST00000152117]
[ENSMUST00000152117]
[ENSMUST00000150346]
[ENSMUST00000155692]
[ENSMUST00000143145]
[ENSMUST00000151770]
[ENSMUST00000151770]
[ENSMUST00000145883]
[ENSMUST00000141856]
[ENSMUST00000231915]
[ENSMUST00000232660]
[ENSMUST00000232395]
[ENSMUST00000231569]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably null
Transcript: ENSMUST00000117648
|
SMART Domains |
Protein: ENSMUSP00000112801 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
2e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
low complexity region
|
1170 |
1190 |
N/A |
INTRINSIC |
low complexity region
|
1248 |
1260 |
N/A |
INTRINSIC |
low complexity region
|
1278 |
1291 |
N/A |
INTRINSIC |
coiled coil region
|
1472 |
1570 |
N/A |
INTRINSIC |
low complexity region
|
1876 |
1887 |
N/A |
INTRINSIC |
RING
|
1931 |
1970 |
7e-9 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000117648
|
SMART Domains |
Protein: ENSMUSP00000112801 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
2e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
low complexity region
|
1170 |
1190 |
N/A |
INTRINSIC |
low complexity region
|
1248 |
1260 |
N/A |
INTRINSIC |
low complexity region
|
1278 |
1291 |
N/A |
INTRINSIC |
coiled coil region
|
1472 |
1570 |
N/A |
INTRINSIC |
low complexity region
|
1876 |
1887 |
N/A |
INTRINSIC |
RING
|
1931 |
1970 |
7e-9 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000122895
|
SMART Domains |
Protein: ENSMUSP00000123037 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000122895
|
SMART Domains |
Protein: ENSMUSP00000123037 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000127667
|
SMART Domains |
Protein: ENSMUSP00000122425 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Pfam:TPR_11
|
22 |
89 |
4.7e-16 |
PFAM |
Pfam:TPR_2
|
24 |
57 |
5.7e-4 |
PFAM |
Pfam:TPR_1
|
25 |
57 |
3.5e-5 |
PFAM |
Pfam:TPR_9
|
35 |
103 |
3.2e-6 |
PFAM |
Pfam:TPR_1
|
58 |
89 |
2.1e-4 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127911
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000130960
|
Predicted Effect |
probably null
Transcript: ENSMUST00000139513
|
SMART Domains |
Protein: ENSMUSP00000117881 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
22 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000151192
|
Predicted Effect |
probably null
Transcript: ENSMUST00000147046
|
SMART Domains |
Protein: ENSMUSP00000119265 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
Pfam:TPR_1
|
175 |
206 |
5.3e-6 |
PFAM |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
low complexity region
|
359 |
382 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000147046
|
SMART Domains |
Protein: ENSMUSP00000119265 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
Pfam:TPR_1
|
175 |
206 |
5.3e-6 |
PFAM |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
low complexity region
|
359 |
382 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000147352
|
SMART Domains |
Protein: ENSMUSP00000116097 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
213 |
246 |
3.61e-2 |
SMART |
TPR
|
247 |
280 |
3.32e-1 |
SMART |
Blast:TPR
|
282 |
314 |
3e-12 |
BLAST |
low complexity region
|
426 |
441 |
N/A |
INTRINSIC |
TPR
|
558 |
591 |
2.55e-2 |
SMART |
low complexity region
|
702 |
714 |
N/A |
INTRINSIC |
coiled coil region
|
747 |
778 |
N/A |
INTRINSIC |
low complexity region
|
1000 |
1014 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000150097
|
SMART Domains |
Protein: ENSMUSP00000119035 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Blast:TPR
|
1 |
22 |
1e-6 |
BLAST |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000150097
|
SMART Domains |
Protein: ENSMUSP00000119035 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Blast:TPR
|
1 |
22 |
1e-6 |
BLAST |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000153988
|
SMART Domains |
Protein: ENSMUSP00000118763 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Blast:TPR
|
1 |
22 |
3e-6 |
BLAST |
low complexity region
|
134 |
149 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000153988
|
SMART Domains |
Protein: ENSMUSP00000118763 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Blast:TPR
|
1 |
22 |
3e-6 |
BLAST |
low complexity region
|
134 |
149 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000152117
|
SMART Domains |
Protein: ENSMUSP00000116896 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
SCOP:d1ihga1
|
69 |
201 |
6e-8 |
SMART |
Blast:TPR
|
175 |
208 |
1e-14 |
BLAST |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
low complexity region
|
617 |
631 |
N/A |
INTRINSIC |
low complexity region
|
635 |
649 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000152117
|
SMART Domains |
Protein: ENSMUSP00000116896 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
SCOP:d1ihga1
|
69 |
201 |
6e-8 |
SMART |
Blast:TPR
|
175 |
208 |
1e-14 |
BLAST |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
low complexity region
|
617 |
631 |
N/A |
INTRINSIC |
low complexity region
|
635 |
649 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000150346
|
SMART Domains |
Protein: ENSMUSP00000122726 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
low complexity region
|
43 |
58 |
N/A |
INTRINSIC |
Pfam:TPR_1
|
175 |
206 |
9.6e-6 |
PFAM |
low complexity region
|
319 |
331 |
N/A |
INTRINSIC |
coiled coil region
|
364 |
395 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000155692
|
SMART Domains |
Protein: ENSMUSP00000122724 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
250 |
283 |
3.61e-2 |
SMART |
TPR
|
284 |
317 |
3.32e-1 |
SMART |
Blast:TPR
|
319 |
351 |
3e-12 |
BLAST |
low complexity region
|
463 |
478 |
N/A |
INTRINSIC |
TPR
|
595 |
628 |
2.55e-2 |
SMART |
low complexity region
|
739 |
751 |
N/A |
INTRINSIC |
coiled coil region
|
784 |
815 |
N/A |
INTRINSIC |
low complexity region
|
1037 |
1051 |
N/A |
INTRINSIC |
low complexity region
|
1055 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000143145
|
Predicted Effect |
probably null
Transcript: ENSMUST00000151770
|
SMART Domains |
Protein: ENSMUSP00000121349 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
3e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000151770
|
SMART Domains |
Protein: ENSMUSP00000121349 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
TPR
|
231 |
264 |
3.61e-2 |
SMART |
TPR
|
265 |
298 |
3.32e-1 |
SMART |
Blast:TPR
|
300 |
332 |
3e-12 |
BLAST |
low complexity region
|
444 |
459 |
N/A |
INTRINSIC |
TPR
|
576 |
609 |
2.55e-2 |
SMART |
low complexity region
|
720 |
732 |
N/A |
INTRINSIC |
coiled coil region
|
765 |
796 |
N/A |
INTRINSIC |
low complexity region
|
1018 |
1032 |
N/A |
INTRINSIC |
low complexity region
|
1036 |
1050 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000145883
|
SMART Domains |
Protein: ENSMUSP00000123442 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
transmembrane domain
|
42 |
64 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000141856
|
SMART Domains |
Protein: ENSMUSP00000117369 Gene: ENSMUSG00000040785
Domain | Start | End | E-Value | Type |
Pfam:TPR_1
|
90 |
121 |
1e-6 |
PFAM |
Pfam:TPR_2
|
90 |
121 |
7.9e-6 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000231915
|
Predicted Effect |
probably null
Transcript: ENSMUST00000232660
|
Predicted Effect |
probably null
Transcript: ENSMUST00000232395
|
Predicted Effect |
probably null
Transcript: ENSMUST00000231569
|
Meta Mutation Damage Score |
0.9497 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.3%
|
Validation Efficiency |
100% (52/52) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 50 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
0610040J01Rik |
G |
T |
5: 64,056,182 (GRCm39) |
|
probably benign |
Het |
2510039O18Rik |
T |
C |
4: 148,026,022 (GRCm39) |
S181P |
probably benign |
Het |
4930522L14Rik |
A |
T |
5: 109,884,440 (GRCm39) |
C473S |
possibly damaging |
Het |
4930523C07Rik |
A |
T |
1: 159,872,149 (GRCm39) |
|
noncoding transcript |
Het |
Aak1 |
A |
G |
6: 86,963,300 (GRCm39) |
K910R |
unknown |
Het |
Abca2 |
A |
G |
2: 25,332,864 (GRCm39) |
D1521G |
probably benign |
Het |
Adamts20 |
C |
A |
15: 94,241,924 (GRCm39) |
D695Y |
probably damaging |
Het |
Bag4 |
C |
T |
8: 26,259,516 (GRCm39) |
A228T |
probably benign |
Het |
Bltp3a |
A |
G |
17: 28,104,905 (GRCm39) |
N533S |
probably damaging |
Het |
Bspry |
T |
A |
4: 62,400,904 (GRCm39) |
I132N |
possibly damaging |
Het |
Cfap300 |
A |
G |
9: 8,027,178 (GRCm39) |
V120A |
probably damaging |
Het |
Cfh |
T |
C |
1: 140,064,004 (GRCm39) |
Y424C |
probably damaging |
Het |
Chd2 |
T |
C |
7: 73,085,709 (GRCm39) |
R1642G |
possibly damaging |
Het |
Chrm2 |
A |
G |
6: 36,501,097 (GRCm39) |
D318G |
probably benign |
Het |
Chrna4 |
A |
G |
2: 180,670,413 (GRCm39) |
S448P |
probably damaging |
Het |
Cldn8 |
A |
C |
16: 88,359,619 (GRCm39) |
M102R |
probably damaging |
Het |
Dock8 |
T |
C |
19: 25,042,754 (GRCm39) |
V112A |
probably benign |
Het |
Fbxo42 |
C |
A |
4: 140,927,861 (GRCm39) |
R714S |
probably damaging |
Het |
Fmo1 |
G |
A |
1: 162,661,281 (GRCm39) |
A334V |
possibly damaging |
Het |
Gpr68 |
A |
T |
12: 100,865,650 (GRCm39) |
|
probably benign |
Het |
Gramd4 |
A |
G |
15: 86,014,361 (GRCm39) |
K345R |
probably damaging |
Het |
Gtpbp1 |
T |
G |
15: 79,600,398 (GRCm39) |
S444A |
probably damaging |
Het |
Ints12 |
T |
C |
3: 132,808,242 (GRCm39) |
Y207H |
probably damaging |
Het |
Kat2b-ps |
A |
T |
5: 93,540,443 (GRCm39) |
|
noncoding transcript |
Het |
Klhl25 |
T |
A |
7: 75,515,162 (GRCm39) |
F23I |
probably damaging |
Het |
Lamc1 |
A |
G |
1: 153,097,274 (GRCm39) |
I1590T |
probably damaging |
Het |
Lhfpl4 |
A |
G |
6: 113,170,805 (GRCm39) |
I127T |
possibly damaging |
Het |
Lrrc71 |
A |
G |
3: 87,650,143 (GRCm39) |
S286P |
possibly damaging |
Het |
Man1c1 |
A |
T |
4: 134,430,329 (GRCm39) |
V151D |
probably damaging |
Het |
Mipol1 |
G |
A |
12: 57,350,310 (GRCm39) |
R36Q |
possibly damaging |
Het |
Nuggc |
T |
A |
14: 65,848,659 (GRCm39) |
W187R |
probably benign |
Het |
Or4a71 |
A |
G |
2: 89,357,987 (GRCm39) |
Y256H |
probably damaging |
Het |
Pkhd1 |
G |
A |
1: 20,593,538 (GRCm39) |
T1525I |
probably damaging |
Het |
Pomp |
A |
G |
5: 147,812,289 (GRCm39) |
E125G |
probably damaging |
Het |
Ptar1 |
G |
T |
19: 23,671,695 (GRCm39) |
G33C |
probably damaging |
Het |
Ptpn3 |
A |
G |
4: 57,235,355 (GRCm39) |
S335P |
probably damaging |
Het |
Pus7 |
A |
G |
5: 23,951,487 (GRCm39) |
Y521H |
probably benign |
Het |
Shank1 |
C |
T |
7: 43,969,076 (GRCm39) |
R324* |
probably null |
Het |
Slc12a3 |
A |
T |
8: 95,069,713 (GRCm39) |
I541F |
probably damaging |
Het |
Slc12a9 |
G |
A |
5: 137,319,775 (GRCm39) |
P580L |
probably benign |
Het |
Spz1 |
A |
G |
13: 92,711,837 (GRCm39) |
L213P |
probably damaging |
Het |
Strn |
A |
G |
17: 79,043,891 (GRCm39) |
V9A |
probably damaging |
Het |
Sytl5 |
A |
T |
X: 9,826,262 (GRCm39) |
N412Y |
probably damaging |
Het |
Tert |
T |
A |
13: 73,775,594 (GRCm39) |
F115Y |
probably damaging |
Het |
Tmem67 |
T |
A |
4: 12,051,473 (GRCm39) |
N785I |
possibly damaging |
Het |
Trf |
T |
C |
9: 103,089,075 (GRCm39) |
N243S |
possibly damaging |
Het |
Vmn2r22 |
T |
C |
6: 123,614,817 (GRCm39) |
T258A |
possibly damaging |
Het |
Vps13b |
A |
C |
15: 35,770,899 (GRCm39) |
Q2114P |
probably damaging |
Het |
Wdfy1 |
T |
A |
1: 79,691,583 (GRCm39) |
R275* |
probably null |
Het |
Wnt2b |
A |
G |
3: 104,860,256 (GRCm39) |
L217S |
probably damaging |
Het |
|
Other mutations in Ttc3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00944:Ttc3
|
APN |
16 |
94,227,620 (GRCm39) |
splice site |
probably null |
|
IGL00979:Ttc3
|
APN |
16 |
94,257,577 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01520:Ttc3
|
APN |
16 |
94,191,066 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01663:Ttc3
|
APN |
16 |
94,210,590 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01720:Ttc3
|
APN |
16 |
94,186,228 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01736:Ttc3
|
APN |
16 |
94,243,386 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02045:Ttc3
|
APN |
16 |
94,210,540 (GRCm39) |
splice site |
probably benign |
|
IGL02203:Ttc3
|
APN |
16 |
94,219,457 (GRCm39) |
splice site |
probably benign |
|
IGL02327:Ttc3
|
APN |
16 |
94,248,967 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02794:Ttc3
|
APN |
16 |
94,268,785 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02898:Ttc3
|
APN |
16 |
94,220,285 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4378001:Ttc3
|
UTSW |
16 |
94,211,765 (GRCm39) |
missense |
probably benign |
0.01 |
R0064:Ttc3
|
UTSW |
16 |
94,223,106 (GRCm39) |
missense |
possibly damaging |
0.79 |
R0098:Ttc3
|
UTSW |
16 |
94,191,124 (GRCm39) |
missense |
probably benign |
0.02 |
R0112:Ttc3
|
UTSW |
16 |
94,186,181 (GRCm39) |
splice site |
probably benign |
|
R0135:Ttc3
|
UTSW |
16 |
94,263,127 (GRCm39) |
missense |
possibly damaging |
0.92 |
R0480:Ttc3
|
UTSW |
16 |
94,232,863 (GRCm39) |
nonsense |
probably null |
|
R0513:Ttc3
|
UTSW |
16 |
94,227,071 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Ttc3
|
UTSW |
16 |
94,188,189 (GRCm39) |
splice site |
probably benign |
|
R0607:Ttc3
|
UTSW |
16 |
94,257,644 (GRCm39) |
nonsense |
probably null |
|
R0742:Ttc3
|
UTSW |
16 |
94,260,739 (GRCm39) |
missense |
probably benign |
0.23 |
R0905:Ttc3
|
UTSW |
16 |
94,257,648 (GRCm39) |
nonsense |
probably null |
|
R1118:Ttc3
|
UTSW |
16 |
94,217,127 (GRCm39) |
splice site |
probably benign |
|
R1355:Ttc3
|
UTSW |
16 |
94,219,496 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1370:Ttc3
|
UTSW |
16 |
94,219,496 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1486:Ttc3
|
UTSW |
16 |
94,248,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R1598:Ttc3
|
UTSW |
16 |
94,223,156 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Ttc3
|
UTSW |
16 |
94,244,176 (GRCm39) |
missense |
probably benign |
0.19 |
R2092:Ttc3
|
UTSW |
16 |
94,243,691 (GRCm39) |
missense |
probably benign |
0.02 |
R2232:Ttc3
|
UTSW |
16 |
94,260,831 (GRCm39) |
missense |
probably benign |
0.00 |
R2339:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R2342:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R2842:Ttc3
|
UTSW |
16 |
94,232,857 (GRCm39) |
missense |
probably damaging |
1.00 |
R3117:Ttc3
|
UTSW |
16 |
94,243,422 (GRCm39) |
missense |
possibly damaging |
0.51 |
R4194:Ttc3
|
UTSW |
16 |
94,223,136 (GRCm39) |
missense |
probably damaging |
0.99 |
R4329:Ttc3
|
UTSW |
16 |
94,267,820 (GRCm39) |
missense |
probably damaging |
1.00 |
R4530:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4531:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4532:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4533:Ttc3
|
UTSW |
16 |
94,267,736 (GRCm39) |
intron |
probably benign |
|
R4588:Ttc3
|
UTSW |
16 |
94,243,760 (GRCm39) |
missense |
probably benign |
0.01 |
R4625:Ttc3
|
UTSW |
16 |
94,189,131 (GRCm39) |
nonsense |
probably null |
|
R4676:Ttc3
|
UTSW |
16 |
94,243,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R4700:Ttc3
|
UTSW |
16 |
94,240,100 (GRCm39) |
splice site |
probably null |
|
R4856:Ttc3
|
UTSW |
16 |
94,191,142 (GRCm39) |
missense |
probably benign |
0.32 |
R4867:Ttc3
|
UTSW |
16 |
94,255,374 (GRCm39) |
missense |
probably damaging |
0.96 |
R4885:Ttc3
|
UTSW |
16 |
94,220,324 (GRCm39) |
missense |
probably damaging |
1.00 |
R4885:Ttc3
|
UTSW |
16 |
94,227,690 (GRCm39) |
critical splice donor site |
probably null |
|
R4899:Ttc3
|
UTSW |
16 |
94,230,314 (GRCm39) |
missense |
probably damaging |
1.00 |
R4997:Ttc3
|
UTSW |
16 |
94,253,841 (GRCm39) |
missense |
probably damaging |
1.00 |
R5023:Ttc3
|
UTSW |
16 |
94,230,218 (GRCm39) |
missense |
probably benign |
0.01 |
R5105:Ttc3
|
UTSW |
16 |
94,267,793 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5205:Ttc3
|
UTSW |
16 |
94,248,918 (GRCm39) |
missense |
probably benign |
0.07 |
R5287:Ttc3
|
UTSW |
16 |
94,260,703 (GRCm39) |
missense |
probably benign |
0.00 |
R5338:Ttc3
|
UTSW |
16 |
94,184,900 (GRCm39) |
missense |
probably damaging |
0.99 |
R5347:Ttc3
|
UTSW |
16 |
94,230,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R5403:Ttc3
|
UTSW |
16 |
94,260,703 (GRCm39) |
missense |
probably benign |
0.00 |
R5460:Ttc3
|
UTSW |
16 |
94,258,241 (GRCm39) |
missense |
probably benign |
0.32 |
R5739:Ttc3
|
UTSW |
16 |
94,240,183 (GRCm39) |
nonsense |
probably null |
|
R6242:Ttc3
|
UTSW |
16 |
94,243,554 (GRCm39) |
missense |
probably benign |
0.04 |
R6253:Ttc3
|
UTSW |
16 |
94,258,272 (GRCm39) |
critical splice donor site |
probably null |
|
R6455:Ttc3
|
UTSW |
16 |
94,219,482 (GRCm39) |
start codon destroyed |
probably null |
0.83 |
R6559:Ttc3
|
UTSW |
16 |
94,223,208 (GRCm39) |
critical splice donor site |
probably null |
|
R6564:Ttc3
|
UTSW |
16 |
94,243,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R6932:Ttc3
|
UTSW |
16 |
94,244,312 (GRCm39) |
missense |
probably benign |
|
R7331:Ttc3
|
UTSW |
16 |
94,195,218 (GRCm39) |
missense |
probably benign |
0.27 |
R7497:Ttc3
|
UTSW |
16 |
94,219,541 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7610:Ttc3
|
UTSW |
16 |
94,228,697 (GRCm39) |
missense |
probably benign |
0.11 |
R7738:Ttc3
|
UTSW |
16 |
94,188,241 (GRCm39) |
missense |
probably benign |
0.00 |
R7970:Ttc3
|
UTSW |
16 |
94,258,223 (GRCm39) |
missense |
probably damaging |
1.00 |
R8052:Ttc3
|
UTSW |
16 |
94,268,848 (GRCm39) |
missense |
probably benign |
0.09 |
R8087:Ttc3
|
UTSW |
16 |
94,243,812 (GRCm39) |
missense |
probably benign |
0.00 |
R8309:Ttc3
|
UTSW |
16 |
94,267,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R8320:Ttc3
|
UTSW |
16 |
94,219,535 (GRCm39) |
missense |
probably damaging |
1.00 |
R8322:Ttc3
|
UTSW |
16 |
94,255,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R8518:Ttc3
|
UTSW |
16 |
94,258,238 (GRCm39) |
missense |
probably benign |
0.21 |
R8670:Ttc3
|
UTSW |
16 |
94,191,067 (GRCm39) |
missense |
probably damaging |
0.99 |
R8826:Ttc3
|
UTSW |
16 |
94,232,829 (GRCm39) |
missense |
possibly damaging |
0.85 |
R8868:Ttc3
|
UTSW |
16 |
94,252,002 (GRCm39) |
missense |
probably benign |
0.00 |
R8873:Ttc3
|
UTSW |
16 |
94,243,842 (GRCm39) |
missense |
probably damaging |
0.97 |
R8940:Ttc3
|
UTSW |
16 |
94,230,358 (GRCm39) |
missense |
possibly damaging |
0.94 |
R8993:Ttc3
|
UTSW |
16 |
94,228,667 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9068:Ttc3
|
UTSW |
16 |
94,204,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R9119:Ttc3
|
UTSW |
16 |
94,192,950 (GRCm39) |
missense |
probably damaging |
0.98 |
R9124:Ttc3
|
UTSW |
16 |
94,236,389 (GRCm39) |
missense |
probably benign |
0.00 |
R9129:Ttc3
|
UTSW |
16 |
94,185,208 (GRCm39) |
missense |
probably benign |
0.02 |
R9189:Ttc3
|
UTSW |
16 |
94,268,831 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9217:Ttc3
|
UTSW |
16 |
94,230,467 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9490:Ttc3
|
UTSW |
16 |
94,245,360 (GRCm39) |
missense |
probably benign |
|
R9564:Ttc3
|
UTSW |
16 |
94,248,918 (GRCm39) |
missense |
probably benign |
0.07 |
R9631:Ttc3
|
UTSW |
16 |
94,171,581 (GRCm39) |
intron |
probably benign |
|
X0022:Ttc3
|
UTSW |
16 |
94,243,384 (GRCm39) |
missense |
probably benign |
0.00 |
Y5378:Ttc3
|
UTSW |
16 |
94,212,988 (GRCm39) |
splice site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- TAGCCTGTGAAGAAGCCCTG -3'
(R):5'- ACTAGACTATACTGCTGCTTGTC -3'
Sequencing Primer
(F):5'- TGAAGAAGCCCTGCAGCTG -3'
(R):5'- CCGAAGCATCACTGAGAC -3'
|
Posted On |
2015-07-21 |