Incidental Mutation 'IGL00423:Spire1'
ID 3304
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Spire1
Ensembl Gene ENSMUSG00000024533
Gene Name spire type actin nucleation factor 1
Synonyms 6030430B19Rik, Spir-1
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.262) question?
Stock # IGL00423
Quality Score
Status
Chromosome 18
Chromosomal Location 67621279-67743860 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 67662085 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 116 (V116A)
Ref Sequence ENSEMBL: ENSMUSP00000110702 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000045105] [ENSMUST00000082243] [ENSMUST00000115050] [ENSMUST00000224799]
AlphaFold Q52KF3
Predicted Effect probably damaging
Transcript: ENSMUST00000045105
AA Change: V116A

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000049336
Gene: ENSMUSG00000024533
AA Change: V116A

DomainStartEndE-ValueType
Pfam:KIND 1 78 3.3e-27 PFAM
PDB:4EFH|B 176 232 9e-6 PDB
low complexity region 289 316 N/A INTRINSIC
low complexity region 339 350 N/A INTRINSIC
SCOP:d1zbdb_ 445 518 1e-7 SMART
low complexity region 596 606 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000082243
AA Change: V116A

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000080871
Gene: ENSMUSG00000024533
AA Change: V116A

DomainStartEndE-ValueType
Blast:KIND 1 73 2e-26 BLAST
PDB:3RBW|D 1 79 3e-28 PDB
PDB:4EFH|B 176 232 9e-6 PDB
low complexity region 302 329 N/A INTRINSIC
low complexity region 352 363 N/A INTRINSIC
SCOP:d1zbdb_ 400 473 2e-7 SMART
low complexity region 551 561 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000115050
AA Change: V116A

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000110702
Gene: ENSMUSG00000024533
AA Change: V116A

DomainStartEndE-ValueType
PDB:4EFH|B 106 162 9e-6 PDB
low complexity region 219 246 N/A INTRINSIC
low complexity region 269 280 N/A INTRINSIC
SCOP:d1zbdb_ 317 390 4e-7 SMART
low complexity region 468 478 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000224799
AA Change: V46A

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Spire proteins, such as SPIRE1, are highly conserved between species. They belong to the family of Wiskott-Aldrich homology region-2 (WH2) proteins, which are involved in actin organization (Kerkhoff et al., 2001 [PubMed 11747823]).[supplied by OMIM, Mar 2008]
PHENOTYPE: Mice homozygous for a knock-out allele are viable and fertile with normal brain anatomy and intact visual and motor functions in both sexes, but show a male-specific increase in contextual and cued fear memory. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 28 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acan A G 7: 78,747,572 (GRCm39) E781G probably benign Het
Acp7 T C 7: 28,314,122 (GRCm39) T358A possibly damaging Het
Adamtsl2 C A 2: 26,975,100 (GRCm39) T199K probably damaging Het
Ap4e1 T A 2: 126,870,209 (GRCm39) S179T probably damaging Het
BC048671 A G 6: 90,280,200 (GRCm39) T39A probably benign Het
Cfap20dc G A 14: 8,473,370 (GRCm38) P600S possibly damaging Het
Cnr1 G A 4: 33,944,116 (GRCm39) S168N probably damaging Het
Cp T C 3: 20,039,826 (GRCm39) V881A possibly damaging Het
Cyp4x1 T C 4: 114,979,145 (GRCm39) T151A probably benign Het
Drd2 T C 9: 49,307,058 (GRCm39) I48T probably damaging Het
Gemin5 A T 11: 58,054,643 (GRCm39) I253N probably damaging Het
Herc3 T A 6: 58,845,700 (GRCm39) I407K probably damaging Het
Ighmbp2 G T 19: 3,318,704 (GRCm39) H457Q probably benign Het
Mboat1 A G 13: 30,379,776 (GRCm39) probably benign Het
Myh2 T C 11: 67,088,171 (GRCm39) V1929A probably benign Het
Nucb2 T A 7: 116,121,066 (GRCm39) probably benign Het
Pcsk5 T C 19: 17,619,923 (GRCm39) N383S probably benign Het
Pde1a A G 2: 79,696,014 (GRCm39) L443P probably damaging Het
Prph2 A T 17: 47,230,704 (GRCm39) N199I probably damaging Het
Rab27b A G 18: 70,129,138 (GRCm39) probably null Het
Ranbp3 G A 17: 57,016,238 (GRCm39) D336N probably damaging Het
Rangap1 T C 15: 81,606,194 (GRCm39) D49G probably benign Het
Rasa3 G A 8: 13,645,410 (GRCm39) probably benign Het
Serpina6 T A 12: 103,618,162 (GRCm39) N217I probably damaging Het
Sorbs2 A G 8: 46,252,743 (GRCm39) probably null Het
Tdrd1 T C 19: 56,839,896 (GRCm39) V652A possibly damaging Het
Tmprss11g T C 5: 86,640,050 (GRCm39) E193G probably benign Het
Zfp451 A T 1: 33,816,660 (GRCm39) V213D probably benign Het
Other mutations in Spire1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01639:Spire1 APN 18 67,678,738 (GRCm39) missense possibly damaging 0.74
IGL02334:Spire1 APN 18 67,639,725 (GRCm39) missense probably benign 0.00
PIT4677001:Spire1 UTSW 18 67,624,435 (GRCm39) missense probably damaging 1.00
R0457:Spire1 UTSW 18 67,685,670 (GRCm39) missense probably damaging 0.98
R0531:Spire1 UTSW 18 67,624,375 (GRCm39) missense probably damaging 1.00
R0608:Spire1 UTSW 18 67,661,945 (GRCm39) missense probably damaging 0.99
R2098:Spire1 UTSW 18 67,636,536 (GRCm39) missense probably damaging 0.99
R2299:Spire1 UTSW 18 67,663,493 (GRCm39) missense probably damaging 1.00
R3028:Spire1 UTSW 18 67,624,417 (GRCm39) missense probably damaging 1.00
R3815:Spire1 UTSW 18 67,639,733 (GRCm39) missense probably benign 0.05
R4049:Spire1 UTSW 18 67,662,101 (GRCm39) splice site probably null
R4050:Spire1 UTSW 18 67,662,101 (GRCm39) splice site probably null
R4059:Spire1 UTSW 18 67,678,783 (GRCm39) missense probably damaging 0.98
R4109:Spire1 UTSW 18 67,630,287 (GRCm39) missense probably damaging 1.00
R4700:Spire1 UTSW 18 67,645,935 (GRCm39) missense probably benign 0.01
R4941:Spire1 UTSW 18 67,652,384 (GRCm39) missense possibly damaging 0.54
R4995:Spire1 UTSW 18 67,685,849 (GRCm39) splice site probably null
R5363:Spire1 UTSW 18 67,639,625 (GRCm39) missense probably damaging 1.00
R5561:Spire1 UTSW 18 67,639,716 (GRCm39) missense probably damaging 0.96
R5795:Spire1 UTSW 18 67,628,265 (GRCm39) missense probably benign
R5952:Spire1 UTSW 18 67,639,779 (GRCm39) missense probably benign 0.00
R5982:Spire1 UTSW 18 67,630,386 (GRCm39) critical splice acceptor site probably null
R7388:Spire1 UTSW 18 67,652,950 (GRCm39) missense probably damaging 1.00
R7559:Spire1 UTSW 18 67,634,187 (GRCm39) missense probably benign 0.04
R8006:Spire1 UTSW 18 67,634,251 (GRCm39) nonsense probably null
R8111:Spire1 UTSW 18 67,652,391 (GRCm39) missense probably damaging 0.98
R8675:Spire1 UTSW 18 67,624,378 (GRCm39) missense possibly damaging 0.48
R8946:Spire1 UTSW 18 67,629,686 (GRCm39) missense probably damaging 1.00
R9441:Spire1 UTSW 18 67,652,462 (GRCm39) missense probably benign 0.41
R9706:Spire1 UTSW 18 67,636,508 (GRCm39) missense probably benign 0.39
T0970:Spire1 UTSW 18 67,634,133 (GRCm39) splice site probably null
Z1088:Spire1 UTSW 18 67,628,222 (GRCm39) missense possibly damaging 0.89
Posted On 2012-04-20