Mutagenetix > Incidental Mutation

Incidental Mutation 'R0069:Prkdc'

33125

Institutional Source

Beutler Lab

Gene Symbol

Prkdc

Ensembl Gene

ENSMUSG00000022672

Gene Name

protein kinase, DNA activated, catalytic polypeptide

Synonyms

slip, DNA-PK, XRCC7, DNAPDcs, DOXNPH, dxnph, DNA-PKcs

MMRRC Submission

038360-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.953) question?

Stock #

R0069 (G1)

Quality Score

225

Status

Validated (trace)

Chromosome

Chromosomal Location

15455730-15660099 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 15544368 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Asparagine at position 1786 (S1786N)

Ref Sequence

ENSEMBL: ENSMUSP00000023352 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000023352]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000023352
AA Change: S1786N

PolyPhen 2 Score 0.028 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000023352
Gene: ENSMUSG00000022672
AA Change: S1786N

Domain	Start	End	E-Value	Type
low complexity region	125	138	N/A	INTRINSIC
low complexity region	1253	1263	N/A	INTRINSIC
low complexity region	1508	1522	N/A	INTRINSIC
NUC194	1810	2206	2.37e-246	SMART
SCOP:d1gw5a_	2210	2493	5e-3	SMART
low complexity region	2669	2681	N/A	INTRINSIC
low complexity region	2841	2855	N/A	INTRINSIC
Pfam:FAT	3024	3470	8.2e-75	PFAM
PI3Kc	3749	4068	3.67e-86	SMART
FATC	4096	4128	1.57e-9	SMART

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.2%
20x: 95.4%

Validation Efficiency

96% (52/54)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes the catalytic subunit of the DNA-dependent protein kinase (DNA-PK). It functions with the Ku70/Ku80 heterodimer protein in DNA double strand break repair and recombination. The protein encoded is a member of the PI3/PI4-kinase family.[provided by RefSeq, Jul 2010]
PHENOTYPE: Mutations at this locus effect genome stability, radiation sensitivity and DNA repair. Nonsense (scid) and null homozygotes have severe combined immunodeficiency. A BALB/c variant allele reduces enzyme activity and predisposes to breast cancer. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2ml1	A	T	6: 128,538,525 (GRCm39)	C632S	probably damaging	Het
Antxr2	T	A	5: 98,096,109 (GRCm39)	M392L	possibly damaging	Het
Cd101	A	G	3: 100,915,533 (GRCm39)	V678A	probably benign	Het
Clec2g	T	C	6: 128,957,274 (GRCm39)		probably null	Het
Clec2g	T	A	6: 128,925,716 (GRCm39)	S42T	probably benign	Het
Creb1	A	G	1: 64,615,367 (GRCm39)	I240V	possibly damaging	Het
D2hgdh	G	T	1: 93,763,009 (GRCm39)	V265L	possibly damaging	Het
Dctn2	A	T	10: 127,113,354 (GRCm39)		probably null	Het
Diablo	A	T	5: 123,656,087 (GRCm39)	S117R	probably damaging	Het
Ebf2	A	T	14: 67,647,499 (GRCm39)	R349S	probably damaging	Het
Fam168a	C	T	7: 100,484,618 (GRCm39)	A252V	probably benign	Het
Fbn2	T	C	18: 58,202,256 (GRCm39)	Y1299C	probably damaging	Het
Gne	A	C	4: 44,060,099 (GRCm39)	V98G	probably damaging	Het
Hk2	A	G	6: 82,713,509 (GRCm39)		probably null	Het
Ifi206	A	T	1: 173,314,413 (GRCm39)	V9D	probably damaging	Het
Ints3	A	G	3: 90,307,954 (GRCm39)		probably benign	Het
Itgal	A	G	7: 126,909,503 (GRCm39)	T56A	probably benign	Het
Lzts3	T	A	2: 130,478,460 (GRCm39)	T213S	probably benign	Het
Map1b	A	G	13: 99,566,356 (GRCm39)	S2122P	unknown	Het
Mei4	C	T	9: 81,907,635 (GRCm39)	Q223*	probably null	Het
Mpzl3	T	C	9: 44,979,550 (GRCm39)	V167A	probably damaging	Het
Myo1d	A	G	11: 80,528,779 (GRCm39)	I681T	probably damaging	Het
Myom2	A	G	8: 15,167,624 (GRCm39)	T1070A	probably benign	Het
Nacc1	T	A	8: 85,403,828 (GRCm39)	I16F	probably damaging	Het
Nfx1	T	C	4: 40,986,688 (GRCm39)		probably benign	Het
Or10ak12	A	T	4: 118,666,887 (GRCm39)	V58D	probably damaging	Het
Or8g33	A	G	9: 39,338,188 (GRCm39)	Y60H	probably damaging	Het
Ostm1	A	C	10: 42,568,952 (GRCm39)	D37A	probably benign	Het
Pde8a	T	C	7: 80,968,871 (GRCm39)		probably benign	Het
Pole2	A	T	12: 69,256,661 (GRCm39)	V288E	probably damaging	Het
Poteg	T	C	8: 27,937,849 (GRCm39)	S2P	probably benign	Het
Ppp2r5c	A	T	12: 110,534,204 (GRCm39)	M356L	probably benign	Het
Prox1	A	G	1: 189,893,116 (GRCm39)	V443A	possibly damaging	Het
Prpf6	T	A	2: 181,257,756 (GRCm39)		probably null	Het
Ptger1	A	T	8: 84,394,948 (GRCm39)	T142S	possibly damaging	Het
Rad54l2	C	A	9: 106,587,564 (GRCm39)	V734L	possibly damaging	Het
Rnpepl1	T	A	1: 92,846,620 (GRCm39)	N507K	possibly damaging	Het
Slc38a10	A	T	11: 119,997,328 (GRCm39)	V722E	probably damaging	Het
Slfn10-ps	A	G	11: 82,926,368 (GRCm39)		noncoding transcript	Het
Slitrk6	A	T	14: 110,987,364 (GRCm39)	L781H	probably damaging	Het
Sult1e1	A	T	5: 87,727,756 (GRCm39)	H175Q	probably damaging	Het
Ube2e3	C	A	2: 78,750,293 (GRCm39)		probably benign	Het
Vmn1r208	A	T	13: 22,956,595 (GRCm39)	W301R	probably benign	Het
Vps13d	A	G	4: 144,789,133 (GRCm39)	I746T	probably benign	Het
Xpnpep3	T	C	15: 81,314,999 (GRCm39)	V233A	probably benign	Het
Zfp329	A	T	7: 12,544,859 (GRCm39)	S222T	probably damaging	Het
Zswim6	T	C	13: 107,875,098 (GRCm39)		noncoding transcript	Het

Other mutations in Prkdc

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00157:Prkdc	APN	16	15,515,090 (GRCm39)	missense	probably damaging	1.00
IGL00225:Prkdc	APN	16	15,627,508 (GRCm39)	missense	possibly damaging	0.64
IGL00481:Prkdc	APN	16	15,608,330 (GRCm39)	missense	probably benign	0.41
IGL00488:Prkdc	APN	16	15,593,711 (GRCm39)	splice site	probably null
IGL00489:Prkdc	APN	16	15,617,790 (GRCm39)	missense	possibly damaging	0.51
IGL00579:Prkdc	APN	16	15,482,103 (GRCm39)	missense	probably damaging	1.00
IGL00587:Prkdc	APN	16	15,470,222 (GRCm39)	splice site	probably benign
IGL00666:Prkdc	APN	16	15,554,699 (GRCm39)	missense	probably damaging	1.00
IGL00675:Prkdc	APN	16	15,605,022 (GRCm39)	missense	probably benign	0.05
IGL00708:Prkdc	APN	16	15,597,290 (GRCm39)	missense	probably damaging	0.97
IGL00725:Prkdc	APN	16	15,634,503 (GRCm39)	missense	probably benign	0.10
IGL00818:Prkdc	APN	16	15,577,618 (GRCm39)	missense	possibly damaging	0.92
IGL00917:Prkdc	APN	16	15,557,428 (GRCm39)	missense	probably damaging	0.98
IGL00990:Prkdc	APN	16	15,519,979 (GRCm39)	missense	probably benign	0.03
IGL01126:Prkdc	APN	16	15,487,185 (GRCm39)	missense	probably benign	0.01
IGL01141:Prkdc	APN	16	15,544,568 (GRCm39)	missense	probably damaging	0.99
IGL01306:Prkdc	APN	16	15,485,595 (GRCm39)	missense	possibly damaging	0.67
IGL01326:Prkdc	APN	16	15,647,556 (GRCm39)	missense	probably benign
IGL01335:Prkdc	APN	16	15,634,760 (GRCm39)	critical splice donor site	probably null
IGL01419:Prkdc	APN	16	15,653,030 (GRCm39)	missense	probably damaging	1.00
IGL01434:Prkdc	APN	16	15,531,451 (GRCm39)	missense	probably benign	0.00
IGL01554:Prkdc	APN	16	15,470,166 (GRCm39)	missense	probably benign	0.05
IGL01671:Prkdc	APN	16	15,485,609 (GRCm39)	missense	possibly damaging	0.90
IGL01871:Prkdc	APN	16	15,600,951 (GRCm39)	missense	probably benign	0.00
IGL01874:Prkdc	APN	16	15,552,858 (GRCm39)	missense	possibly damaging	0.89
IGL01930:Prkdc	APN	16	15,516,751 (GRCm39)	missense	probably damaging	1.00
IGL01984:Prkdc	APN	16	15,526,643 (GRCm39)	missense	probably benign
IGL02121:Prkdc	APN	16	15,535,048 (GRCm39)	missense	probably benign	0.18
IGL02152:Prkdc	APN	16	15,487,149 (GRCm39)	missense	probably benign	0.15
IGL02172:Prkdc	APN	16	15,627,623 (GRCm39)	missense	probably benign	0.10
IGL02336:Prkdc	APN	16	15,603,843 (GRCm39)	missense	probably benign	0.01
IGL02336:Prkdc	APN	16	15,603,842 (GRCm39)	missense	possibly damaging	0.47
IGL02393:Prkdc	APN	16	15,634,622 (GRCm39)	missense	probably benign	0.42
IGL02406:Prkdc	APN	16	15,488,399 (GRCm39)	missense	probably benign	0.00
IGL02500:Prkdc	APN	16	15,532,146 (GRCm39)	critical splice donor site	probably null
IGL02568:Prkdc	APN	16	15,544,406 (GRCm39)	missense	probably damaging	0.98
IGL02579:Prkdc	APN	16	15,488,465 (GRCm39)	missense	possibly damaging	0.83
IGL02652:Prkdc	APN	16	15,600,951 (GRCm39)	missense	probably benign	0.00
IGL02661:Prkdc	APN	16	15,587,689 (GRCm39)	missense	possibly damaging	0.92
IGL02685:Prkdc	APN	16	15,653,907 (GRCm39)	missense	possibly damaging	0.61
IGL02741:Prkdc	APN	16	15,570,590 (GRCm39)	splice site	probably benign
IGL02803:Prkdc	APN	16	15,651,530 (GRCm39)	splice site	probably benign
IGL02866:Prkdc	APN	16	15,649,191 (GRCm39)	missense	probably damaging	1.00
IGL02882:Prkdc	APN	16	15,469,383 (GRCm39)	nonsense	probably null
IGL02989:Prkdc	APN	16	15,617,880 (GRCm39)	missense	possibly damaging	0.67
IGL03053:Prkdc	APN	16	15,652,030 (GRCm39)	missense	probably benign	0.02
IGL03071:Prkdc	APN	16	15,617,848 (GRCm39)	missense	probably benign	0.01
IGL03091:Prkdc	APN	16	15,523,174 (GRCm39)	splice site	probably benign
IGL03100:Prkdc	APN	16	15,531,499 (GRCm39)	missense	probably benign	0.08
IGL03128:Prkdc	APN	16	15,518,608 (GRCm39)	splice site	probably benign
IGL03168:Prkdc	APN	16	15,652,030 (GRCm39)	missense	probably benign	0.02
IGL03204:Prkdc	APN	16	15,587,665 (GRCm39)	missense	probably benign	0.01
IGL03390:Prkdc	APN	16	15,488,490 (GRCm39)	nonsense	probably null
anhimid	UTSW	16	15,543,325 (GRCm39)	critical splice donor site	probably null
anhinga	UTSW	16	15,526,796 (GRCm39)	critical splice donor site	probably null
Bushtit	UTSW	16	15,570,628 (GRCm39)	missense	probably damaging	0.97
clover	UTSW	16	15,520,020 (GRCm39)	splice site	probably benign
crackle	UTSW	16	15,603,914 (GRCm39)	critical splice donor site	probably null
Daffy	UTSW	16	15,647,561 (GRCm39)	missense	possibly damaging	0.86
darter	UTSW	16	15,591,477 (GRCm39)	missense	possibly damaging	0.93
Elmer_fudd	UTSW	16	15,625,922 (GRCm39)	missense	probably benign	0.01
envenomation	UTSW	16	15,653,091 (GRCm39)	nonsense	probably null
hobgoblin	UTSW	16	15,633,850 (GRCm39)	missense	probably damaging	1.00
Incubus	UTSW	16	15,490,191 (GRCm39)	missense	probably damaging	1.00
liming	UTSW	16	15,570,693 (GRCm39)	nonsense	probably null
newt	UTSW	16	15,545,590 (GRCm39)	missense	probably benign	0.04
ornithorhynchus	UTSW	16	15,634,523 (GRCm39)	critical splice donor site	probably null
primitive	UTSW	16	15,653,022 (GRCm39)	frame shift	probably null
roadrunner	UTSW	16	15,651,751 (GRCm39)	missense	probably damaging	1.00
Schreier	UTSW	16	15,488,392 (GRCm39)	missense	probably benign	0.00
screamer	UTSW	16	15,649,146 (GRCm39)	nonsense	probably null
Screamer10	UTSW	16	15,585,889 (GRCm39)	missense	probably damaging	0.98
screamer2	UTSW	16	15,470,416 (GRCm39)	critical splice donor site	probably null
screamer3	UTSW	16	15,558,196 (GRCm39)	critical splice donor site	probably null
screamer4	UTSW	16	15,600,943 (GRCm39)	missense	probably benign	0.00
screamer5	UTSW	16	15,505,268 (GRCm39)	missense	probably benign
screamer6	UTSW	16	15,577,469 (GRCm39)	missense	probably damaging	1.00
screamer7	UTSW	16	15,472,681 (GRCm39)	splice site	probably null
Screamer8	UTSW	16	15,537,297 (GRCm39)	missense	probably benign	0.00
Screamer9	UTSW	16	15,552,786 (GRCm39)	missense	probably benign	0.01
Tweetie	UTSW	16	15,535,665 (GRCm39)	missense	probably damaging	1.00
updock	UTSW	16	15,612,958 (GRCm39)	missense	probably benign
ANU23:Prkdc	UTSW	16	15,485,595 (GRCm39)	missense	possibly damaging	0.67
R0008:Prkdc	UTSW	16	15,526,565 (GRCm39)	splice site	probably benign
R0018:Prkdc	UTSW	16	15,544,406 (GRCm39)	missense	probably benign	0.03
R0018:Prkdc	UTSW	16	15,544,406 (GRCm39)	missense	probably benign	0.03
R0125:Prkdc	UTSW	16	15,516,871 (GRCm39)	missense	probably damaging	0.98
R0131:Prkdc	UTSW	16	15,531,517 (GRCm39)	missense	probably benign	0.09
R0131:Prkdc	UTSW	16	15,531,517 (GRCm39)	missense	probably benign	0.09
R0132:Prkdc	UTSW	16	15,531,517 (GRCm39)	missense	probably benign	0.09
R0137:Prkdc	UTSW	16	15,558,196 (GRCm39)	critical splice donor site	probably null
R0334:Prkdc	UTSW	16	15,554,663 (GRCm39)	missense	probably benign	0.00
R0373:Prkdc	UTSW	16	15,609,791 (GRCm39)	missense	probably damaging	1.00
R0485:Prkdc	UTSW	16	15,651,604 (GRCm39)	missense	probably damaging	0.97
R0511:Prkdc	UTSW	16	15,649,146 (GRCm39)	nonsense	probably null
R0538:Prkdc	UTSW	16	15,651,652 (GRCm39)	missense	probably damaging	1.00
R0595:Prkdc	UTSW	16	15,625,952 (GRCm39)	missense	probably damaging	1.00
R0607:Prkdc	UTSW	16	15,589,921 (GRCm39)	missense	probably damaging	0.98
R0616:Prkdc	UTSW	16	15,508,271 (GRCm39)	missense	probably damaging	1.00
R0630:Prkdc	UTSW	16	15,628,665 (GRCm39)	missense	probably damaging	1.00
R0694:Prkdc	UTSW	16	15,586,501 (GRCm39)	missense	probably damaging	1.00
R0702:Prkdc	UTSW	16	15,603,835 (GRCm39)	missense	possibly damaging	0.95
R0965:Prkdc	UTSW	16	15,647,580 (GRCm39)	missense	probably benign
R1027:Prkdc	UTSW	16	15,468,576 (GRCm39)	missense	possibly damaging	0.80
R1029:Prkdc	UTSW	16	15,472,613 (GRCm39)	splice site	probably benign
R1033:Prkdc	UTSW	16	15,585,815 (GRCm39)	missense	probably damaging	1.00
R1067:Prkdc	UTSW	16	15,570,646 (GRCm39)	missense	probably damaging	0.99
R1116:Prkdc	UTSW	16	15,600,943 (GRCm39)	missense	probably benign	0.00
R1187:Prkdc	UTSW	16	15,577,610 (GRCm39)	missense	probably damaging	0.98
R1226:Prkdc	UTSW	16	15,491,861 (GRCm39)	missense	possibly damaging	0.80
R1279:Prkdc	UTSW	16	15,508,146 (GRCm39)	missense	probably damaging	1.00
R1304:Prkdc	UTSW	16	15,577,587 (GRCm39)	missense	probably damaging	0.99
R1314:Prkdc	UTSW	16	15,482,091 (GRCm39)	missense	possibly damaging	0.68
R1351:Prkdc	UTSW	16	15,485,564 (GRCm39)	missense	possibly damaging	0.62
R1509:Prkdc	UTSW	16	15,549,430 (GRCm39)	missense	probably damaging	1.00
R1512:Prkdc	UTSW	16	15,505,268 (GRCm39)	missense	probably benign
R1531:Prkdc	UTSW	16	15,589,970 (GRCm39)	missense	probably benign	0.01
R1579:Prkdc	UTSW	16	15,493,192 (GRCm39)	missense	probably benign	0.00
R1669:Prkdc	UTSW	16	15,551,922 (GRCm39)	missense	probably damaging	1.00
R1682:Prkdc	UTSW	16	15,494,853 (GRCm39)	missense	probably benign	0.19
R1713:Prkdc	UTSW	16	15,612,958 (GRCm39)	missense	probably benign
R1762:Prkdc	UTSW	16	15,455,825 (GRCm39)	missense	probably benign
R1789:Prkdc	UTSW	16	15,557,388 (GRCm39)	missense	probably damaging	1.00
R1822:Prkdc	UTSW	16	15,577,469 (GRCm39)	missense	probably damaging	1.00
R1848:Prkdc	UTSW	16	15,625,922 (GRCm39)	missense	probably benign	0.01
R1887:Prkdc	UTSW	16	15,647,499 (GRCm39)	missense	probably benign	0.00
R1891:Prkdc	UTSW	16	15,543,300 (GRCm39)	missense	probably benign	0.02
R1921:Prkdc	UTSW	16	15,532,079 (GRCm39)	missense	possibly damaging	0.80
R1922:Prkdc	UTSW	16	15,532,130 (GRCm39)	missense	probably benign	0.00
R1929:Prkdc	UTSW	16	15,472,681 (GRCm39)	splice site	probably null
R1939:Prkdc	UTSW	16	15,653,777 (GRCm39)	missense	possibly damaging	0.95
R2021:Prkdc	UTSW	16	15,494,873 (GRCm39)	missense	probably benign	0.00
R2033:Prkdc	UTSW	16	15,505,216 (GRCm39)	splice site	probably benign
R2056:Prkdc	UTSW	16	15,545,469 (GRCm39)	missense	probably benign	0.03
R2057:Prkdc	UTSW	16	15,545,469 (GRCm39)	missense	probably benign	0.03
R2058:Prkdc	UTSW	16	15,545,469 (GRCm39)	missense	probably benign	0.03
R2082:Prkdc	UTSW	16	15,533,827 (GRCm39)	missense	probably damaging	1.00
R2109:Prkdc	UTSW	16	15,505,254 (GRCm39)	missense	probably benign	0.01
R2124:Prkdc	UTSW	16	15,537,297 (GRCm39)	missense	probably benign	0.00
R2164:Prkdc	UTSW	16	15,523,071 (GRCm39)	missense	probably damaging	1.00
R2174:Prkdc	UTSW	16	15,552,786 (GRCm39)	missense	probably benign	0.01
R2191:Prkdc	UTSW	16	15,516,688 (GRCm39)	missense	probably damaging	1.00
R2270:Prkdc	UTSW	16	15,472,681 (GRCm39)	splice site	probably null
R2271:Prkdc	UTSW	16	15,472,681 (GRCm39)	splice site	probably null
R2272:Prkdc	UTSW	16	15,472,681 (GRCm39)	splice site	probably null
R2356:Prkdc	UTSW	16	15,502,068 (GRCm39)	missense	probably benign
R2852:Prkdc	UTSW	16	15,470,416 (GRCm39)	critical splice donor site	probably null
R3115:Prkdc	UTSW	16	15,482,222 (GRCm39)	missense	probably benign	0.01
R3116:Prkdc	UTSW	16	15,482,222 (GRCm39)	missense	probably benign	0.01
R3499:Prkdc	UTSW	16	15,585,889 (GRCm39)	missense	probably damaging	0.98
R3687:Prkdc	UTSW	16	15,617,831 (GRCm39)	missense	probably benign
R3834:Prkdc	UTSW	16	15,609,810 (GRCm39)	missense	probably damaging	1.00
R3835:Prkdc	UTSW	16	15,609,810 (GRCm39)	missense	probably damaging	1.00
R3961:Prkdc	UTSW	16	15,647,475 (GRCm39)	splice site	probably null
R4151:Prkdc	UTSW	16	15,634,637 (GRCm39)	missense	probably benign
R4233:Prkdc	UTSW	16	15,653,783 (GRCm39)	missense	probably benign	0.11
R4281:Prkdc	UTSW	16	15,623,963 (GRCm39)	splice site	probably null
R4296:Prkdc	UTSW	16	15,555,769 (GRCm39)	missense	probably damaging	0.99
R4344:Prkdc	UTSW	16	15,585,886 (GRCm39)	missense	probably damaging	0.98
R4424:Prkdc	UTSW	16	15,653,946 (GRCm39)	missense	probably damaging	1.00
R4424:Prkdc	UTSW	16	15,591,603 (GRCm39)	missense	probably damaging	0.98
R4497:Prkdc	UTSW	16	15,518,517 (GRCm39)	missense	probably benign	0.43
R4549:Prkdc	UTSW	16	15,554,734 (GRCm39)	missense	possibly damaging	0.89
R4594:Prkdc	UTSW	16	15,585,830 (GRCm39)	missense	possibly damaging	0.64
R4603:Prkdc	UTSW	16	15,628,688 (GRCm39)	missense	probably damaging	0.98
R4615:Prkdc	UTSW	16	15,480,938 (GRCm39)	missense	probably damaging	0.99
R4648:Prkdc	UTSW	16	15,634,638 (GRCm39)	missense	probably benign	0.05
R4662:Prkdc	UTSW	16	15,551,916 (GRCm39)	missense	probably damaging	1.00
R4680:Prkdc	UTSW	16	15,589,894 (GRCm39)	missense	probably benign	0.00
R4700:Prkdc	UTSW	16	15,519,976 (GRCm39)	missense	probably damaging	1.00
R4716:Prkdc	UTSW	16	15,628,701 (GRCm39)	missense	probably benign	0.32
R4720:Prkdc	UTSW	16	15,485,579 (GRCm39)	missense	probably benign
R4785:Prkdc	UTSW	16	15,466,840 (GRCm39)	missense	probably benign	0.21
R4822:Prkdc	UTSW	16	15,468,576 (GRCm39)	missense	possibly damaging	0.80
R4829:Prkdc	UTSW	16	15,519,939 (GRCm39)	missense	possibly damaging	0.80
R4981:Prkdc	UTSW	16	15,496,173 (GRCm39)	missense	probably damaging	1.00
R4989:Prkdc	UTSW	16	15,491,861 (GRCm39)	missense	possibly damaging	0.80
R5059:Prkdc	UTSW	16	15,655,882 (GRCm39)	missense	probably damaging	1.00
R5074:Prkdc	UTSW	16	15,589,912 (GRCm39)	missense	probably damaging	1.00
R5115:Prkdc	UTSW	16	15,608,444 (GRCm39)	missense	probably benign
R5151:Prkdc	UTSW	16	15,533,899 (GRCm39)	missense	probably damaging	1.00
R5165:Prkdc	UTSW	16	15,496,136 (GRCm39)	missense	probably damaging	1.00
R5215:Prkdc	UTSW	16	15,589,985 (GRCm39)	missense	possibly damaging	0.64
R5270:Prkdc	UTSW	16	15,552,819 (GRCm39)	missense	probably damaging	1.00
R5278:Prkdc	UTSW	16	15,532,838 (GRCm39)	missense	probably damaging	1.00
R5351:Prkdc	UTSW	16	15,649,176 (GRCm39)	missense	probably benign	0.03
R5416:Prkdc	UTSW	16	15,623,814 (GRCm39)	missense	probably damaging	1.00
R5418:Prkdc	UTSW	16	15,612,961 (GRCm39)	missense	probably benign	0.20
R5437:Prkdc	UTSW	16	15,587,739 (GRCm39)	missense	possibly damaging	0.46
R5452:Prkdc	UTSW	16	15,586,501 (GRCm39)	missense	possibly damaging	0.96
R5518:Prkdc	UTSW	16	15,496,172 (GRCm39)	missense	probably damaging	1.00
R5538:Prkdc	UTSW	16	15,469,333 (GRCm39)	missense	probably damaging	1.00
R5589:Prkdc	UTSW	16	15,524,655 (GRCm39)	missense	probably benign	0.02
R5618:Prkdc	UTSW	16	15,627,476 (GRCm39)	missense	probably damaging	1.00
R5640:Prkdc	UTSW	16	15,647,633 (GRCm39)	missense	possibly damaging	0.86
R5661:Prkdc	UTSW	16	15,628,634 (GRCm39)	missense	possibly damaging	0.81
R5771:Prkdc	UTSW	16	15,482,097 (GRCm39)	missense	probably damaging	1.00
R5772:Prkdc	UTSW	16	15,597,252 (GRCm39)	missense	possibly damaging	0.49
R5783:Prkdc	UTSW	16	15,535,665 (GRCm39)	missense	probably damaging	1.00
R5792:Prkdc	UTSW	16	15,634,616 (GRCm39)	missense	probably damaging	1.00
R5797:Prkdc	UTSW	16	15,555,698 (GRCm39)	nonsense	probably null
R5826:Prkdc	UTSW	16	15,551,962 (GRCm39)	missense	probably benign
R5883:Prkdc	UTSW	16	15,533,778 (GRCm39)	missense	probably benign
R5895:Prkdc	UTSW	16	15,570,693 (GRCm39)	nonsense	probably null
R5998:Prkdc	UTSW	16	15,601,021 (GRCm39)	missense	probably damaging	1.00
R6000:Prkdc	UTSW	16	15,647,561 (GRCm39)	missense	possibly damaging	0.86
R6120:Prkdc	UTSW	16	15,557,335 (GRCm39)	missense	probably benign	0.00
R6145:Prkdc	UTSW	16	15,589,937 (GRCm39)	missense	probably damaging	1.00
R6209:Prkdc	UTSW	16	15,608,456 (GRCm39)	missense	probably damaging	1.00
R6293:Prkdc	UTSW	16	15,605,019 (GRCm39)	missense	probably benign	0.00
R6321:Prkdc	UTSW	16	15,532,783 (GRCm39)	missense	probably benign
R6376:Prkdc	UTSW	16	15,587,749 (GRCm39)	missense	probably benign	0.06
R6387:Prkdc	UTSW	16	15,516,679 (GRCm39)	missense	probably benign	0.01
R6406:Prkdc	UTSW	16	15,535,665 (GRCm39)	missense	probably damaging	1.00
R6469:Prkdc	UTSW	16	15,612,939 (GRCm39)	missense	probably benign	0.10
R6486:Prkdc	UTSW	16	15,570,628 (GRCm39)	missense	probably damaging	0.97
R6665:Prkdc	UTSW	16	15,603,914 (GRCm39)	critical splice donor site	probably null
R6703:Prkdc	UTSW	16	15,488,392 (GRCm39)	missense	probably benign	0.00
R6774:Prkdc	UTSW	16	15,543,325 (GRCm39)	critical splice donor site	probably null
R6854:Prkdc	UTSW	16	15,469,402 (GRCm39)	missense	probably damaging	1.00
R6878:Prkdc	UTSW	16	15,594,936 (GRCm39)	missense	probably benign	0.31
R6882:Prkdc	UTSW	16	15,626,020 (GRCm39)	missense	probably benign	0.33
R6882:Prkdc	UTSW	16	15,601,127 (GRCm39)	critical splice donor site	probably null
R6949:Prkdc	UTSW	16	15,617,853 (GRCm39)	missense	probably benign
R6950:Prkdc	UTSW	16	15,633,850 (GRCm39)	missense	probably damaging	1.00
R7019:Prkdc	UTSW	16	15,587,830 (GRCm39)	missense	probably benign	0.00
R7064:Prkdc	UTSW	16	15,608,317 (GRCm39)	missense	probably benign	0.00
R7097:Prkdc	UTSW	16	15,507,207 (GRCm39)	missense	probably damaging	1.00
R7201:Prkdc	UTSW	16	15,516,667 (GRCm39)	missense	probably benign	0.12
R7235:Prkdc	UTSW	16	15,532,127 (GRCm39)	missense	probably benign
R7283:Prkdc	UTSW	16	15,535,628 (GRCm39)	missense	probably benign	0.00
R7401:Prkdc	UTSW	16	15,466,602 (GRCm39)	missense	probably damaging	1.00
R7525:Prkdc	UTSW	16	15,490,191 (GRCm39)	missense	probably damaging	1.00
R7647:Prkdc	UTSW	16	15,555,807 (GRCm39)	missense	probably damaging	1.00
R7679:Prkdc	UTSW	16	15,649,183 (GRCm39)	missense	probably damaging	1.00
R7803:Prkdc	UTSW	16	15,623,960 (GRCm39)	missense	probably null	0.05
R7858:Prkdc	UTSW	16	15,507,141 (GRCm39)	missense	probably benign	0.11
R7872:Prkdc	UTSW	16	15,532,870 (GRCm39)	missense	probably benign	0.05
R7896:Prkdc	UTSW	16	15,526,767 (GRCm39)	missense	probably damaging	0.97
R8032:Prkdc	UTSW	16	15,597,315 (GRCm39)	missense	probably benign	0.00
R8055:Prkdc	UTSW	16	15,634,749 (GRCm39)	missense	probably benign	0.09
R8153:Prkdc	UTSW	16	15,482,108 (GRCm39)	missense	probably damaging	1.00
R8281:Prkdc	UTSW	16	15,523,117 (GRCm39)	missense	probably damaging	1.00
R8302:Prkdc	UTSW	16	15,653,946 (GRCm39)	missense	probably damaging	1.00
R8322:Prkdc	UTSW	16	15,532,005 (GRCm39)	splice site	probably benign
R8401:Prkdc	UTSW	16	15,591,477 (GRCm39)	missense	possibly damaging	0.93
R8440:Prkdc	UTSW	16	15,653,022 (GRCm39)	frame shift	probably null
R8458:Prkdc	UTSW	16	15,608,540 (GRCm39)	critical splice donor site	probably null
R8472:Prkdc	UTSW	16	15,469,400 (GRCm39)	missense	probably damaging	1.00
R8478:Prkdc	UTSW	16	15,466,788 (GRCm39)	missense	probably benign	0.00
R8515:Prkdc	UTSW	16	15,482,232 (GRCm39)	missense	probably damaging	1.00
R8546:Prkdc	UTSW	16	15,480,899 (GRCm39)	missense	probably damaging	1.00
R8678:Prkdc	UTSW	16	15,526,796 (GRCm39)	critical splice donor site	probably null
R8739:Prkdc	UTSW	16	15,626,068 (GRCm39)	missense	probably benign	0.01
R8749:Prkdc	UTSW	16	15,601,029 (GRCm39)	missense	possibly damaging	0.85
R8836:Prkdc	UTSW	16	15,545,523 (GRCm39)	missense	probably damaging	1.00
R8904:Prkdc	UTSW	16	15,545,590 (GRCm39)	missense	probably benign	0.04
R8952:Prkdc	UTSW	16	15,491,624 (GRCm39)	intron	probably benign
R8971:Prkdc	UTSW	16	15,493,229 (GRCm39)	missense	probably null	0.99
R8974:Prkdc	UTSW	16	15,617,726 (GRCm39)	splice site	probably null
R9052:Prkdc	UTSW	16	15,508,160 (GRCm39)	missense	probably benign	0.05
R9069:Prkdc	UTSW	16	15,653,091 (GRCm39)	nonsense	probably null
R9200:Prkdc	UTSW	16	15,523,153 (GRCm39)	missense	probably damaging	1.00
R9235:Prkdc	UTSW	16	15,651,751 (GRCm39)	missense	probably damaging	1.00
R9278:Prkdc	UTSW	16	15,634,523 (GRCm39)	critical splice donor site	probably null
R9309:Prkdc	UTSW	16	15,526,792 (GRCm39)	nonsense	probably null
R9386:Prkdc	UTSW	16	15,496,136 (GRCm39)	missense	probably damaging	0.99
R9452:Prkdc	UTSW	16	15,485,465 (GRCm39)	missense	possibly damaging	0.90
R9500:Prkdc	UTSW	16	15,657,079 (GRCm39)	missense	possibly damaging	0.76
R9608:Prkdc	UTSW	16	15,548,335 (GRCm39)	missense	probably damaging	1.00
R9608:Prkdc	UTSW	16	15,548,334 (GRCm39)	missense	possibly damaging	0.96
R9636:Prkdc	UTSW	16	15,548,341 (GRCm39)	missense	probably benign	0.19
R9656:Prkdc	UTSW	16	15,617,818 (GRCm39)	missense	probably benign	0.00
R9674:Prkdc	UTSW	16	15,533,819 (GRCm39)	missense	probably damaging	0.98
R9760:Prkdc	UTSW	16	15,657,044 (GRCm39)	nonsense	probably null
X0023:Prkdc	UTSW	16	15,558,142 (GRCm39)	missense	probably benign
Z1176:Prkdc	UTSW	16	15,505,286 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- AGGTACAGCCAATTGTGTTTCCCC -3'
(R):5'- GCCATTGTGTTGCCAATCAGTTGC -3'

Sequencing Primer
(F):5'- tatgtgtgggcatcatatacttgtg -3'
(R):5'- TCTGGACTTCAACACATCAATGG -3'

Posted On

2013-05-09