Incidental Mutation 'IGL00429:Trav13n-4'
ID332406
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Trav13n-4
Ensembl Gene ENSMUSG00000076823
Gene NameT cell receptor alpha variable 13N-4
SynonymsGm10907, ENSMUSG00000072517
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.063) question?
Stock #IGL00429
Quality Score
Status
Chromosome14
Chromosomal Location53363836-53364102 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 53363831 bp
ZygosityHeterozygous
Amino Acid Change Leucine to Glutamine at position 19 (L19Q)
Ref Sequence ENSEMBL: ENSMUSP00000143372 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000103634] [ENSMUST00000196105]
Predicted Effect probably benign
Transcript: ENSMUST00000103634
SMART Domains Protein: ENSMUSP00000100411
Gene: ENSMUSG00000076823

DomainStartEndE-ValueType
IGv 18 89 2.89e-9 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000196105
AA Change: L19Q

PolyPhen 2 Score 0.031 (Sensitivity: 0.95; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000143372
Gene: ENSMUSG00000076823
AA Change: L19Q

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
IGv 38 109 1.2e-11 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700009J07Rik G A 10: 77,893,839 probably benign Het
4933411K16Rik T C 19: 42,052,544 L38P probably damaging Het
Abca1 A G 4: 53,059,255 probably null Het
Abca15 T A 7: 120,397,054 I1401N probably damaging Het
Adam3 A C 8: 24,694,278 Y569D probably damaging Het
Ap2a1 T C 7: 44,905,768 S458G probably damaging Het
Asxl3 C T 18: 22,525,223 P2097S probably benign Het
AW551984 T C 9: 39,592,849 D607G probably benign Het
Ccdc158 C A 5: 92,657,881 M338I probably benign Het
Cdh23 A G 10: 60,421,141 S735P probably damaging Het
Cdh9 T C 15: 16,828,362 V180A probably damaging Het
Cyp4a31 A T 4: 115,574,974 probably benign Het
Dus4l A G 12: 31,641,669 V180A probably benign Het
Dysf A T 6: 84,189,844 T1672S probably damaging Het
F830016B08Rik T A 18: 60,300,268 L141Q probably damaging Het
Fhod3 A G 18: 24,994,540 E313G probably damaging Het
Gm4884 A G 7: 41,044,385 T593A probably benign Het
Hist1h2bm T C 13: 21,722,140 S15P possibly damaging Het
Il18r1 G A 1: 40,498,652 E526K possibly damaging Het
Lama4 A T 10: 39,011,026 H109L possibly damaging Het
Mab21l1 A C 3: 55,783,136 Q48P probably damaging Het
Magi3 T A 3: 104,014,978 K1474N probably damaging Het
Mre11a T C 9: 14,802,813 F237L probably damaging Het
Mst1r A T 9: 107,913,250 probably benign Het
Myh2 C T 11: 67,180,790 Q478* probably null Het
Mylip C A 13: 45,408,567 P282T probably benign Het
Mymk T C 2: 27,062,787 Y103C probably damaging Het
Necab1 A T 4: 15,052,656 N107K probably damaging Het
Pclo T C 5: 14,680,739 probably benign Het
Phgdh T C 3: 98,328,315 K129E probably damaging Het
Plxna4 T C 6: 32,162,091 Y1714C probably damaging Het
Pm20d2 A G 4: 33,187,205 probably benign Het
Ppfibp2 A G 7: 107,697,594 T172A probably benign Het
Prkca T C 11: 108,343,508 T54A probably benign Het
Prlr A G 15: 10,328,324 D295G probably benign Het
Rdh12 A G 12: 79,211,402 I68V probably benign Het
Slc14a2 A G 18: 78,150,438 F850L possibly damaging Het
Smad2 A T 18: 76,298,495 S185C possibly damaging Het
Soga1 A C 2: 157,030,864 F909C probably damaging Het
Ush2a T A 1: 188,400,114 C844* probably null Het
Vwce T A 19: 10,664,511 probably null Het
Wdr95 T C 5: 149,595,244 probably benign Het
Zfp143 T C 7: 110,091,772 I510T probably damaging Het
Zfp930 G T 8: 69,227,982 K90N probably damaging Het
Other mutations in Trav13n-4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00562:Trav13n-4 APN 14 53363966 missense possibly damaging 0.94
IGL00563:Trav13n-4 APN 14 53363966 missense possibly damaging 0.94
IGL01620:Trav13n-4 APN 14 53364016 missense probably damaging 0.99
IGL01748:Trav13n-4 APN 14 53364013 missense probably benign 0.15
IGL02327:Trav13n-4 APN 14 53364110 unclassified probably benign
R4197:Trav13n-4 UTSW 14 53363921 missense probably benign
R5467:Trav13n-4 UTSW 14 53363846 missense probably damaging 1.00
R6765:Trav13n-4 UTSW 14 53364100 missense probably benign
R6845:Trav13n-4 UTSW 14 53362399 missense probably damaging 1.00
R7339:Trav13n-4 UTSW 14 53363978 missense probably benign 0.02
Posted On2015-08-05