Incidental Mutation 'IGL00533:Gm5581'
| ID |
332454 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Gm5581
|
| Ensembl Gene |
ENSMUSG00000061969 |
| Gene Name |
predicted gene 5581 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.072)
|
| Stock # |
IGL00533
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
6 |
| Chromosomal Location |
131143329-131144284 bp(-) (GRCm39) |
| Type of Mutation |
unclassified |
| DNA Base Change (assembly) |
A to T
at 131144604 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Gene Model |
predicted gene model for transcript(s):
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000072940
|
| SMART Domains |
Protein: ENSMUSP00000072710
Gene: ENSMUSG00000061969
| Domain | Start | End | E-Value | Type |
|---|
|
KRAB
|
8 |
68 |
1.79e-34 |
SMART |
|
low complexity region
|
285 |
302 |
N/A |
INTRINSIC |
|
low complexity region
|
355 |
366 |
N/A |
INTRINSIC |
|
PDB:1MEY|G
|
422 |
507 |
4e-15 |
PDB |
|
Blast:HNHc
|
445 |
504 |
4e-6 |
BLAST |
|
ZnF_C2H2
|
509 |
531 |
9.73e-4 |
SMART |
|
ZnF_C2H2
|
537 |
559 |
1.5e-4 |
SMART |
|
ZnF_C2H2
|
565 |
587 |
1.98e-4 |
SMART |
|
ZnF_C2H2
|
593 |
615 |
1.52e-5 |
SMART |
|
ZnF_C2H2
|
621 |
643 |
9.73e-4 |
SMART |
|
ZnF_C2H2
|
649 |
671 |
9.36e-6 |
SMART |
|
ZnF_C2H2
|
677 |
699 |
3.49e-5 |
SMART |
|
ZnF_C2H2
|
705 |
727 |
9.88e-5 |
SMART |
|
ZnF_C2H2
|
733 |
755 |
9.88e-5 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000204992
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 12 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acap2 |
A |
T |
16: 30,958,293 (GRCm39) |
L175Q |
probably damaging |
Het |
| Akna |
A |
T |
4: 63,316,110 (GRCm39) |
|
probably null |
Het |
| Arhgef38 |
C |
T |
3: 132,822,220 (GRCm39) |
W181* |
probably null |
Het |
| Hyls1 |
G |
T |
9: 35,473,220 (GRCm39) |
Y65* |
probably null |
Het |
| Map1b |
A |
G |
13: 99,569,112 (GRCm39) |
I1203T |
unknown |
Het |
| Met |
C |
T |
6: 17,534,936 (GRCm39) |
|
probably benign |
Het |
| Pcdh15 |
A |
G |
10: 74,338,552 (GRCm39) |
T1065A |
probably damaging |
Het |
| Proser3 |
A |
G |
7: 30,240,096 (GRCm39) |
V336A |
possibly damaging |
Het |
| Prpf40a |
G |
A |
2: 53,035,355 (GRCm39) |
R729C |
probably damaging |
Het |
| Ptprk |
A |
G |
10: 28,461,971 (GRCm39) |
E1152G |
probably damaging |
Het |
| Scn11a |
A |
C |
9: 119,603,447 (GRCm39) |
D1073E |
probably damaging |
Het |
| Spsb3 |
C |
T |
17: 25,109,539 (GRCm39) |
|
probably benign |
Het |
|
| Other mutations in Gm5581 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01372:Gm5581
|
APN |
6 |
131,145,366 (GRCm39) |
exon |
noncoding transcript |
|
|
IGL01630:Gm5581
|
APN |
6 |
131,145,259 (GRCm39) |
exon |
noncoding transcript |
|
|
IGL01667:Gm5581
|
APN |
6 |
131,144,735 (GRCm39) |
unclassified |
noncoding transcript |
|
|
IGL02260:Gm5581
|
APN |
6 |
131,144,909 (GRCm39) |
unclassified |
noncoding transcript |
|
|
IGL03212:Gm5581
|
APN |
6 |
131,158,413 (GRCm39) |
exon |
noncoding transcript |
|
|
IGL03306:Gm5581
|
APN |
6 |
131,145,044 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R0366:Gm5581
|
UTSW |
6 |
131,143,410 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R1764:Gm5581
|
UTSW |
6 |
131,158,362 (GRCm39) |
exon |
noncoding transcript |
|
|
R1961:Gm5581
|
UTSW |
6 |
131,145,125 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R2129:Gm5581
|
UTSW |
6 |
131,145,247 (GRCm39) |
exon |
noncoding transcript |
|
|
R3177:Gm5581
|
UTSW |
6 |
131,143,928 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R4026:Gm5581
|
UTSW |
6 |
131,144,031 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R4289:Gm5581
|
UTSW |
6 |
131,144,519 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R4943:Gm5581
|
UTSW |
6 |
131,144,088 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R4961:Gm5581
|
UTSW |
6 |
131,144,190 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R5817:Gm5581
|
UTSW |
6 |
131,144,132 (GRCm39) |
unclassified |
noncoding transcript |
|
|
R5944:Gm5581
|
UTSW |
6 |
131,145,363 (GRCm39) |
exon |
noncoding transcript |
|
|
| Posted On |
2015-08-05 |
Incidental Mutation