Incidental Mutation 'R4528:Or10x1'
| ID |
332975 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or10x1
|
| Ensembl Gene |
ENSMUSG00000066672 |
| Gene Name |
olfactory receptor family 10 subfamily X member 1 |
| Synonyms |
Olfr417, MOR267-11, GA_x6K02T2P20D-20787051-20786119 |
| MMRRC Submission |
041769-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.067)
|
| Stock # |
R4528 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
1 |
| Chromosomal Location |
174196485-174197414 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 174196822 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Histidine
at position 113
(L113H)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151947
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085862]
[ENSMUST00000217962]
[ENSMUST00000220394]
|
| AlphaFold |
F8VQB1 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000085862
AA Change: L113H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000083024
Gene: ENSMUSG00000066672
AA Change: L113H
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
304 |
5.7e-46 |
PFAM |
|
Pfam:7tm_1
|
39 |
303 |
6.6e-20 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000217962
AA Change: L113H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000220394
AA Change: L113H
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.8%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Atm |
A |
T |
9: 53,412,059 (GRCm39) |
I999K |
probably benign |
Het |
| Camsap3 |
A |
G |
8: 3,656,515 (GRCm39) |
E535G |
possibly damaging |
Het |
| Cd109 |
CATTTATTTATTTATTTATTTATTTATTTATTTAT |
CATTTATTTATTTATTTATTTATTTATTTATTTATTTAT |
9: 78,619,782 (GRCm39) |
|
probably benign |
Het |
| Cenpu |
G |
T |
8: 47,015,457 (GRCm39) |
G34* |
probably null |
Het |
| Col7a1 |
C |
A |
9: 108,788,601 (GRCm39) |
A739D |
unknown |
Het |
| Coro1b |
T |
C |
19: 4,199,980 (GRCm39) |
V107A |
probably benign |
Het |
| Cpeb3 |
T |
C |
19: 37,116,488 (GRCm39) |
D381G |
possibly damaging |
Het |
| Cyp2a22 |
T |
C |
7: 26,634,194 (GRCm39) |
D320G |
possibly damaging |
Het |
| Dcaf1 |
A |
T |
9: 106,721,403 (GRCm39) |
K398N |
probably damaging |
Het |
| Etfa |
A |
G |
9: 55,407,334 (GRCm39) |
S52P |
probably damaging |
Het |
| Fat4 |
T |
A |
3: 38,945,443 (GRCm39) |
H1445Q |
probably benign |
Het |
| Foxred2 |
T |
A |
15: 77,827,449 (GRCm39) |
M637L |
probably benign |
Het |
| Gbe1 |
A |
T |
16: 70,275,225 (GRCm39) |
I342L |
probably benign |
Het |
| Gm14410 |
A |
T |
2: 176,885,736 (GRCm39) |
I176K |
probably benign |
Het |
| Gm14410 |
G |
T |
2: 176,885,734 (GRCm39) |
H177N |
probably damaging |
Het |
| Gm1527 |
T |
A |
3: 28,968,542 (GRCm39) |
M198K |
probably damaging |
Het |
| Hr |
T |
C |
14: 70,803,823 (GRCm39) |
L838P |
probably damaging |
Het |
| Kmt2e |
T |
C |
5: 23,678,556 (GRCm39) |
S212P |
possibly damaging |
Het |
| Lims1 |
T |
C |
10: 58,245,882 (GRCm39) |
C180R |
probably damaging |
Het |
| Mki67 |
A |
T |
7: 135,297,088 (GRCm39) |
S2649T |
probably damaging |
Het |
| Or4f57 |
T |
C |
2: 111,791,293 (GRCm39) |
N42D |
probably damaging |
Het |
| Or51t4 |
A |
G |
7: 102,598,013 (GRCm39) |
M104V |
probably damaging |
Het |
| Pde4dip |
C |
T |
3: 97,624,338 (GRCm39) |
E1399K |
probably damaging |
Het |
| Pex1 |
T |
C |
5: 3,681,712 (GRCm39) |
Y1053H |
probably damaging |
Het |
| Plscr2 |
G |
A |
9: 92,171,746 (GRCm39) |
E113K |
possibly damaging |
Het |
| Pus1 |
T |
C |
5: 110,922,596 (GRCm39) |
Y309C |
probably damaging |
Het |
| Scube3 |
T |
A |
17: 28,381,973 (GRCm39) |
V333D |
possibly damaging |
Het |
| Serpina11 |
A |
T |
12: 103,952,592 (GRCm39) |
N66K |
probably benign |
Het |
| Thtpa |
T |
A |
14: 55,333,039 (GRCm39) |
D41E |
probably damaging |
Het |
| Timm10b |
A |
G |
7: 105,332,013 (GRCm39) |
N828S |
probably benign |
Het |
| Tlr12 |
A |
C |
4: 128,511,818 (GRCm39) |
L144R |
probably damaging |
Het |
| Uba7 |
A |
G |
9: 107,861,102 (GRCm39) |
E964G |
possibly damaging |
Het |
| Ugt1a6b |
T |
A |
1: 88,035,301 (GRCm39) |
I213N |
probably damaging |
Het |
| Usp5 |
C |
G |
6: 124,799,593 (GRCm39) |
K318N |
possibly damaging |
Het |
| Zbtb43 |
A |
G |
2: 33,352,337 (GRCm39) |
|
probably benign |
Het |
| Zfp985 |
A |
T |
4: 147,667,347 (GRCm39) |
I72F |
possibly damaging |
Het |
| Zfpm1 |
G |
A |
8: 123,062,381 (GRCm39) |
R480H |
probably benign |
Het |
|
| Other mutations in Or10x1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01885:Or10x1
|
APN |
1 |
174,196,967 (GRCm39) |
missense |
probably damaging |
0.99 |
|
PIT4366001:Or10x1
|
UTSW |
1 |
174,196,656 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0131:Or10x1
|
UTSW |
1 |
174,197,152 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0131:Or10x1
|
UTSW |
1 |
174,197,152 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0132:Or10x1
|
UTSW |
1 |
174,197,152 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1623:Or10x1
|
UTSW |
1 |
174,196,515 (GRCm39) |
missense |
probably benign |
0.43 |
|
R1862:Or10x1
|
UTSW |
1 |
174,197,018 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1901:Or10x1
|
UTSW |
1 |
174,196,734 (GRCm39) |
missense |
probably benign |
|
|
R1972:Or10x1
|
UTSW |
1 |
174,197,136 (GRCm39) |
missense |
probably benign |
0.05 |
|
R2180:Or10x1
|
UTSW |
1 |
174,196,967 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4413:Or10x1
|
UTSW |
1 |
174,197,040 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R4750:Or10x1
|
UTSW |
1 |
174,196,488 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4849:Or10x1
|
UTSW |
1 |
174,196,966 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4851:Or10x1
|
UTSW |
1 |
174,196,562 (GRCm39) |
missense |
probably benign |
0.44 |
|
R5394:Or10x1
|
UTSW |
1 |
174,196,836 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5916:Or10x1
|
UTSW |
1 |
174,196,698 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6248:Or10x1
|
UTSW |
1 |
174,197,236 (GRCm39) |
missense |
probably benign |
|
|
R7311:Or10x1
|
UTSW |
1 |
174,196,759 (GRCm39) |
missense |
probably benign |
0.30 |
|
R7868:Or10x1
|
UTSW |
1 |
174,196,551 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1088:Or10x1
|
UTSW |
1 |
174,197,310 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGGACAGATCTCTCCACACTCC -3'
(R):5'- CTCAGAACTGCCCTCATATGG -3'
Sequencing Primer
(F):5'- ACAGATCTCTCCACACTCCTATGTAC -3'
(R):5'- CCCTCATATGGCAGAAGAAGTGTC -3'
|
| Posted On |
2015-08-18 |
Incidental Mutation