Mutagenetix > Incidental Mutation

Incidental Mutation 'R0226:Osbpl3'

33917

Institutional Source

Beutler Lab

Gene Symbol

Osbpl3

Ensembl Gene

ENSMUSG00000029822

Gene Name

oxysterol binding protein-like 3

Synonyms

6720421I08Rik, OSBP3, ORP3, 1200014M06Rik

MMRRC Submission

038471-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R0226 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

50293330-50456201 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 50353008 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Tryptophan to Arginine at position 63 (W63R)

Ref Sequence

ENSEMBL: ENSMUSP00000114472 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000071728] [ENSMUST00000090019] [ENSMUST00000114466] [ENSMUST00000114468] [ENSMUST00000136926] [ENSMUST00000146341] [ENSMUST00000203907]

AlphaFold

Q9DBS9

Predicted Effect

probably damaging
Transcript: ENSMUST00000071728
AA Change: W63R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000071643
Gene: ENSMUSG00000029822
AA Change: W63R

Domain	Start	End	E-Value	Type
low complexity region	15	33	N/A	INTRINSIC
PH	51	147	9.56e-11	SMART
low complexity region	177	191	N/A	INTRINSIC
Blast:PH	254	311	4e-25	BLAST
low complexity region	392	425	N/A	INTRINSIC
Pfam:Oxysterol_BP	459	804	3.2e-139	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000090019
AA Change: W63R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000087473
Gene: ENSMUSG00000029822
AA Change: W63R

Domain	Start	End	E-Value	Type
low complexity region	15	33	N/A	INTRINSIC
PH	51	147	9.56e-11	SMART
low complexity region	177	191	N/A	INTRINSIC
Blast:PH	288	342	4e-25	BLAST
low complexity region	459	492	N/A	INTRINSIC
Pfam:Oxysterol_BP	526	870	3e-136	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000114466
AA Change: W63R

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000110110
Gene: ENSMUSG00000029822
AA Change: W63R

Domain	Start	End	E-Value	Type
low complexity region	15	33	N/A	INTRINSIC
PH	51	147	9.56e-11	SMART
low complexity region	177	191	N/A	INTRINSIC
Blast:PH	288	342	3e-25	BLAST
low complexity region	423	456	N/A	INTRINSIC
Pfam:Oxysterol_BP	490	835	3.5e-139	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000114468
AA Change: W63R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000110112
Gene: ENSMUSG00000029822
AA Change: W63R

Domain	Start	End	E-Value	Type
low complexity region	15	33	N/A	INTRINSIC
PH	51	147	9.56e-11	SMART
low complexity region	177	191	N/A	INTRINSIC
Blast:PH	254	311	4e-25	BLAST
low complexity region	428	461	N/A	INTRINSIC
Pfam:Oxysterol_BP	495	840	1.3e-138	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000133141

Predicted Effect

probably damaging
Transcript: ENSMUST00000136926
AA Change: W63R

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000144934
Gene: ENSMUSG00000029822
AA Change: W63R

Domain	Start	End	E-Value	Type
low complexity region	15	33	N/A	INTRINSIC
SCOP:d1btka_	50	75	5e-4	SMART
Blast:PH	51	76	1e-11	BLAST

Predicted Effect

probably damaging
Transcript: ENSMUST00000146341
AA Change: W63R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000114472
Gene: ENSMUSG00000029822
AA Change: W63R

Domain	Start	End	E-Value	Type
low complexity region	15	33	N/A	INTRINSIC
PH	51	144	1.27e-6	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000203907

SMART Domains

Protein: ENSMUSP00000145249
Gene: ENSMUSG00000029822

Domain	Start	End	E-Value	Type
Blast:PH	1	91	1e-57	BLAST
low complexity region	208	241	N/A	INTRINSIC

Meta Mutation Damage Score

0.6702

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.8%
20x: 94.4%

Validation Efficiency

100% (98/98)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the oxysterol-binding protein (OSBP) family, a group of intracellular lipid receptors. Most members contain an N-terminal pleckstrin homology domain and a highly conserved C-terminal OSBP-like sterol-binding domain. The encoded protein is involved in the regulation of cell adhesion and organization of the actin cytoskeleton. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]

Allele List at MGI

Other mutations in this stock

Total: 90 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700129C05Rik	G	T	14: 59,142,120 (GRCm38)	T54K	possibly damaging	Het
2210408I21Rik	A	T	13: 77,303,425 (GRCm38)	E876V	possibly damaging	Het
Aasdh	A	T	5: 76,902,002 (GRCm38)	L49Q	probably damaging	Het
Abca8b	T	C	11: 109,957,018 (GRCm38)		probably null	Het
Ablim1	A	T	19: 57,043,870 (GRCm38)	L556Q	probably damaging	Het
Afdn	A	G	17: 13,899,146 (GRCm38)	T1700A	probably benign	Het
Agl	G	A	3: 116,752,071 (GRCm38)	R1359C	probably damaging	Het
Agpat3	T	A	10: 78,278,029 (GRCm38)	H275L	possibly damaging	Het
Ahcyl1	A	T	3: 107,670,270 (GRCm38)	C180*	probably null	Het
Aim2	A	G	1: 173,462,333 (GRCm38)		probably benign	Het
Angpt1	T	C	15: 42,468,235 (GRCm38)	N320S	probably benign	Het
Ankrd52	T	A	10: 128,389,858 (GRCm38)		probably null	Het
Ap1g1	C	T	8: 109,855,062 (GRCm38)	S654L	probably benign	Het
Bpifa1	T	A	2: 154,146,057 (GRCm38)	S173R	probably benign	Het
Brd8	T	C	18: 34,603,894 (GRCm38)		probably benign	Het
Btbd9	C	T	17: 30,274,942 (GRCm38)	D492N	possibly damaging	Het
C1qtnf2	A	G	11: 43,490,843 (GRCm38)	T161A	probably benign	Het
Car6	T	C	4: 150,187,508 (GRCm38)	Y228C	probably damaging	Het
Ccdc149	A	G	5: 52,400,217 (GRCm38)	L273P	probably damaging	Het
Cit	G	A	5: 115,984,840 (GRCm38)	R1405Q	probably damaging	Het
Cox17	T	C	16: 38,349,276 (GRCm38)	L48P	probably damaging	Het
Cttn	A	G	7: 144,441,852 (GRCm38)		probably benign	Het
Cyp4f18	T	C	8: 71,989,775 (GRCm38)		probably benign	Het
Dtnbp1	A	G	13: 44,923,193 (GRCm38)	L175P	probably damaging	Het
Efl1	T	C	7: 82,693,011 (GRCm38)		probably benign	Het
Fbn1	C	T	2: 125,320,910 (GRCm38)	R2152Q	possibly damaging	Het
Fignl1	A	T	11: 11,801,061 (GRCm38)	S665T	probably benign	Het
Gm884	A	T	11: 103,603,241 (GRCm38)	F663L	probably benign	Het
Gm9843	A	T	16: 76,403,561 (GRCm38)		noncoding transcript	Het
Gpr155	C	T	2: 73,367,592 (GRCm38)	V395I	probably benign	Het
Greb1l	T	C	18: 10,522,076 (GRCm38)		probably benign	Het
Hdgfl1	A	T	13: 26,769,996 (GRCm38)	H31Q	probably benign	Het
Heatr1	T	C	13: 12,410,562 (GRCm38)	S628P	probably damaging	Het
Hivep2	A	G	10: 14,129,712 (GRCm38)	T685A	probably benign	Het
Hmgcl	T	G	4: 135,958,728 (GRCm38)	V168G	probably damaging	Het
Itch	T	C	2: 155,199,394 (GRCm38)	I454T	probably benign	Het
Itih2	T	C	2: 10,115,299 (GRCm38)	D309G	possibly damaging	Het
Kcmf1	T	C	6: 72,842,952 (GRCm38)	I304V	probably benign	Het
Kcnh1	G	T	1: 192,276,805 (GRCm38)	W222C	probably damaging	Het
Kcnh1	G	A	1: 192,276,804 (GRCm38)	W222*	probably null	Het
Kif24	T	A	4: 41,414,939 (GRCm38)	K287*	probably null	Het
Lrig3	A	G	10: 125,972,117 (GRCm38)		probably benign	Het
Lrp2	A	T	2: 69,537,563 (GRCm38)	C202S	probably null	Het
Lrrn2	A	G	1: 132,937,820 (GRCm38)	N208D	probably damaging	Het
Mcm5	C	T	8: 75,126,252 (GRCm38)	T664I	possibly damaging	Het
Mfsd10	A	G	5: 34,634,446 (GRCm38)	L365S	probably benign	Het
Mfsd6	A	G	1: 52,658,690 (GRCm38)		probably benign	Het
Mgat4e	A	G	1: 134,541,103 (GRCm38)	V401A	probably benign	Het
Mllt3	C	A	4: 87,840,732 (GRCm38)	V360L	probably benign	Het
Mrm1	G	A	11: 84,819,170 (GRCm38)	A68V	possibly damaging	Het
Myo19	A	G	11: 84,897,732 (GRCm38)		probably benign	Het
Myo3b	A	G	2: 70,217,166 (GRCm38)	T311A	probably benign	Het
Myo5b	T	C	18: 74,742,180 (GRCm38)	F1552L	probably benign	Het
Myo7b	C	T	18: 31,972,896 (GRCm38)	V1353I	probably benign	Het
Myo9b	T	C	8: 71,353,832 (GRCm38)	S1512P	probably damaging	Het
Nanos3	C	T	8: 84,176,134 (GRCm38)	R133Q	probably damaging	Het
Pcdh17	T	C	14: 84,448,201 (GRCm38)	S703P	probably damaging	Het
Pclo	T	C	5: 14,765,223 (GRCm38)	I1231T	probably damaging	Het
Pex16	A	C	2: 92,375,687 (GRCm38)		probably benign	Het
Pfkl	T	C	10: 77,992,534 (GRCm38)	N399S	probably benign	Het
Pkhd1l1	G	A	15: 44,526,784 (GRCm38)	R1432K	possibly damaging	Het
Prdm1	T	A	10: 44,456,696 (GRCm38)	T106S	probably benign	Het
Prrc1	A	G	18: 57,363,291 (GRCm38)	M105V	probably benign	Het
Psg26	A	G	7: 18,483,958 (GRCm38)	C12R	possibly damaging	Het
Rnf43	A	T	11: 87,731,437 (GRCm38)	S455C	probably damaging	Het
Ryr2	T	C	13: 11,772,556 (GRCm38)	K977R	probably damaging	Het
Sart1	C	T	19: 5,381,122 (GRCm38)		probably benign	Het
Sec14l5	A	G	16: 5,180,303 (GRCm38)	S509G	probably benign	Het
Sin3b	A	T	8: 72,744,508 (GRCm38)	E361V	probably benign	Het
Slc35e3	C	T	10: 117,740,890 (GRCm38)	E179K	possibly damaging	Het
Sntb2	T	C	8: 107,001,583 (GRCm38)	S388P	probably damaging	Het
Srms	A	G	2: 181,212,382 (GRCm38)	S131P	probably benign	Het
Stxbp5	T	C	10: 9,866,698 (GRCm38)		probably benign	Het
Taar2	T	C	10: 23,941,063 (GRCm38)	V167A	probably damaging	Het
Taar2	G	A	10: 23,941,495 (GRCm38)	R311H	probably benign	Het
Thsd7a	A	G	6: 12,321,900 (GRCm38)	Y1516H	possibly damaging	Het
Tlk1	T	A	2: 70,714,169 (GRCm38)		probably benign	Het
Tmem173	A	T	18: 35,739,088 (GRCm38)	F120L	probably benign	Het
Tnfaip3	T	C	10: 19,002,747 (GRCm38)	K771R	probably damaging	Het
Treml1	C	T	17: 48,360,458 (GRCm38)	L124F	probably damaging	Het
Ttn	G	T	2: 76,780,797 (GRCm38)	Q9137K	possibly damaging	Het
Unkl	T	A	17: 25,230,711 (GRCm38)	I469N	probably damaging	Het
Vmn1r173	G	T	7: 23,703,083 (GRCm38)	V248L	possibly damaging	Het
Vps35	T	C	8: 85,273,575 (GRCm38)	Q474R	probably damaging	Het
Wdr17	T	A	8: 54,663,008 (GRCm38)	T580S	probably benign	Het
Xpnpep1	T	C	19: 53,010,152 (GRCm38)	K222E	probably benign	Het
Ylpm1	A	G	12: 85,049,737 (GRCm38)	T1446A	probably benign	Het
Zfp277	A	G	12: 40,364,162 (GRCm38)	L228S	possibly damaging	Het
Zfp941	T	A	7: 140,813,275 (GRCm38)	K57M	probably damaging	Het
Zmpste24	A	T	4: 121,081,209 (GRCm38)	S244R	probably benign	Het

Other mutations in Osbpl3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00229:Osbpl3	APN	6	50,323,068 (GRCm38)	missense	probably damaging	1.00
IGL01784:Osbpl3	APN	6	50,344,922 (GRCm38)	missense	probably damaging	1.00
IGL02221:Osbpl3	APN	6	50,327,367 (GRCm38)	unclassified	probably benign
IGL02323:Osbpl3	APN	6	50,346,326 (GRCm38)	critical splice donor site	probably null
IGL02894:Osbpl3	APN	6	50,346,332 (GRCm38)	missense	possibly damaging	0.89
H8562:Osbpl3	UTSW	6	50,347,466 (GRCm38)	missense	probably benign	0.09
PIT4283001:Osbpl3	UTSW	6	50,346,088 (GRCm38)	missense	probably benign	0.01
R0416:Osbpl3	UTSW	6	50,348,018 (GRCm38)	missense	probably benign
R0417:Osbpl3	UTSW	6	50,348,018 (GRCm38)	missense	probably benign
R0601:Osbpl3	UTSW	6	50,299,403 (GRCm38)	missense	probably benign	0.05
R0826:Osbpl3	UTSW	6	50,346,377 (GRCm38)	missense	probably damaging	1.00
R1390:Osbpl3	UTSW	6	50,308,427 (GRCm38)	missense	probably damaging	1.00
R1520:Osbpl3	UTSW	6	50,346,431 (GRCm38)	missense	possibly damaging	0.75
R1603:Osbpl3	UTSW	6	50,323,093 (GRCm38)	missense	probably damaging	1.00
R1678:Osbpl3	UTSW	6	50,336,213 (GRCm38)	critical splice donor site	probably null
R1843:Osbpl3	UTSW	6	50,370,143 (GRCm38)	missense	probably damaging	1.00
R1943:Osbpl3	UTSW	6	50,320,074 (GRCm38)	missense	probably benign	0.16
R3435:Osbpl3	UTSW	6	50,348,070 (GRCm38)	missense	possibly damaging	0.94
R3768:Osbpl3	UTSW	6	50,348,002 (GRCm38)	missense	possibly damaging	0.64
R4746:Osbpl3	UTSW	6	50,328,674 (GRCm38)	missense	probably damaging	0.99
R4751:Osbpl3	UTSW	6	50,300,997 (GRCm38)	missense	possibly damaging	0.95
R4776:Osbpl3	UTSW	6	50,300,973 (GRCm38)	missense	probably benign	0.01
R4814:Osbpl3	UTSW	6	50,353,000 (GRCm38)	missense	probably damaging	1.00
R4841:Osbpl3	UTSW	6	50,309,376 (GRCm38)	missense	probably damaging	1.00
R4881:Osbpl3	UTSW	6	50,352,784 (GRCm38)	missense	possibly damaging	0.95
R4999:Osbpl3	UTSW	6	50,336,297 (GRCm38)	missense	probably damaging	0.99
R5512:Osbpl3	UTSW	6	50,309,360 (GRCm38)	missense	probably damaging	0.98
R6282:Osbpl3	UTSW	6	50,348,083 (GRCm38)	splice site	probably null
R6304:Osbpl3	UTSW	6	50,312,674 (GRCm38)	missense	probably damaging	1.00
R6905:Osbpl3	UTSW	6	50,351,882 (GRCm38)	missense	probably damaging	1.00
R7000:Osbpl3	UTSW	6	50,297,157 (GRCm38)	missense	probably damaging	1.00
R7102:Osbpl3	UTSW	6	50,320,135 (GRCm38)	missense	probably damaging	1.00
R7275:Osbpl3	UTSW	6	50,346,430 (GRCm38)	missense	probably benign	0.02
R7334:Osbpl3	UTSW	6	50,344,906 (GRCm38)	missense	possibly damaging	0.78
R7368:Osbpl3	UTSW	6	50,348,098 (GRCm38)	missense	probably damaging	1.00
R8052:Osbpl3	UTSW	6	50,346,015 (GRCm38)	missense	probably damaging	1.00
R8183:Osbpl3	UTSW	6	50,303,109 (GRCm38)	missense	probably benign	0.00
R8810:Osbpl3	UTSW	6	50,351,872 (GRCm38)	missense	probably damaging	1.00
R8932:Osbpl3	UTSW	6	50,327,391 (GRCm38)	missense	probably benign	0.37
R9168:Osbpl3	UTSW	6	50,352,782 (GRCm38)	critical splice donor site	probably null
R9447:Osbpl3	UTSW	6	50,344,877 (GRCm38)	nonsense	probably null
R9476:Osbpl3	UTSW	6	50,336,214 (GRCm38)	critical splice donor site	probably null
R9510:Osbpl3	UTSW	6	50,336,214 (GRCm38)	critical splice donor site	probably null
R9788:Osbpl3	UTSW	6	50,347,364 (GRCm38)	critical splice donor site	probably null
RF011:Osbpl3	UTSW	6	50,348,138 (GRCm38)	critical splice acceptor site	probably benign
Z1088:Osbpl3	UTSW	6	50,297,097 (GRCm38)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- ACTTACATCAGCTTGGCTCTTGGC -3'
(R):5'- TGCACAGACACATACAGCTTCTTGC -3'

Sequencing Primer
(F):5'- TTCCAGGCAGAAGAATCTCTGTG -3'
(R):5'- TGAACTCTGCTGACTGAACAG -3'

Posted On

2013-05-09