Incidental Mutation 'R4574:Pate2'
ID 342340
Institutional Source Beutler Lab
Gene Symbol Pate2
Ensembl Gene ENSMUSG00000074452
Gene Name prostate and testis expressed 2
Synonyms LOC330921, mANLP1
MMRRC Submission 041797-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4574 (G1)
Quality Score 225
Status Validated
Chromosome 9
Chromosomal Location 35580935-35584185 bp(+) (GRCm39)
Type of Mutation intron
DNA Base Change (assembly) C to A at 35596969 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000130484 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000098906] [ENSMUST00000170021]
AlphaFold Q3UW31
Predicted Effect unknown
Transcript: ENSMUST00000098906
AA Change: P119Q
SMART Domains Protein: ENSMUSP00000096505
Gene: ENSMUSG00000074452
AA Change: P119Q

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000170021
SMART Domains Protein: ENSMUSP00000130484
Gene: ENSMUSG00000091215

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000183567
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 95.2%
Validation Efficiency 97% (63/65)
Allele List at MGI
Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam1b A C 5: 121,638,856 (GRCm39) S730A probably benign Het
Adamts9 G A 6: 92,856,940 (GRCm39) R319* probably null Het
Anapc1 G T 2: 128,469,115 (GRCm39) S1575R probably damaging Het
Appbp2 A T 11: 85,100,764 (GRCm39) probably null Het
Bcas2 C T 3: 103,081,666 (GRCm39) P90S probably benign Het
Carmil3 GGACGA GGA 14: 55,736,933 (GRCm39) probably benign Het
Cd101 T C 3: 100,920,469 (GRCm39) N477D probably benign Het
Cdk12 A G 11: 98,111,814 (GRCm39) probably benign Het
Clcn4 T C 7: 7,290,804 (GRCm39) E634G probably benign Het
Cltb C T 13: 54,746,574 (GRCm39) R64H probably damaging Het
Cpt1b G T 15: 89,308,247 (GRCm39) probably null Het
Ctf2 T G 7: 127,318,556 (GRCm39) T148P possibly damaging Het
Ddx23 G A 15: 98,545,505 (GRCm39) T601I probably damaging Het
Dlx6 G T 6: 6,865,305 (GRCm39) probably benign Het
Dmrtb1 A T 4: 107,534,265 (GRCm39) N183K possibly damaging Het
Dnah11 A G 12: 117,975,990 (GRCm39) probably null Het
Dnah5 C T 15: 28,367,909 (GRCm39) P2765S probably benign Het
Dnah6 T A 6: 73,063,164 (GRCm39) N2698I probably damaging Het
Fpr-rs6 T A 17: 20,403,359 (GRCm39) M1L probably damaging Het
Gm4841 T C 18: 60,402,998 (GRCm39) N365S probably benign Het
Gsdmc2 C T 15: 63,699,872 (GRCm39) probably null Het
Irx5 G A 8: 93,084,890 (GRCm39) V27I probably damaging Het
Kmt2e T A 5: 23,697,405 (GRCm39) V101D possibly damaging Het
Maip1 A C 1: 57,452,404 (GRCm39) K219Q possibly damaging Het
Mpp7 G T 18: 7,353,228 (GRCm39) R493S probably benign Het
Ms4a14 T C 19: 11,281,335 (GRCm39) T408A probably benign Het
Mthfr A G 4: 148,127,998 (GRCm39) N117S possibly damaging Het
Mtres1 T A 10: 43,409,006 (GRCm39) S46C probably damaging Het
Myo5c A G 9: 75,176,893 (GRCm39) I613V probably benign Het
Neurl1b A G 17: 26,650,860 (GRCm39) Q44R probably benign Het
Nup54 T A 5: 92,573,641 (GRCm39) N187I probably benign Het
Ofcc1 G A 13: 40,168,864 (GRCm39) T841I probably damaging Het
Or5ak22 C A 2: 85,230,370 (GRCm39) C169F probably damaging Het
Pccb T C 9: 100,867,252 (GRCm39) S445G probably damaging Het
Pex3 G A 10: 13,411,315 (GRCm39) Q188* probably null Het
Pikfyve T A 1: 65,231,351 (GRCm39) W74R probably damaging Het
Plcl2 T C 17: 50,914,874 (GRCm39) S628P probably damaging Het
Pnldc1 T C 17: 13,111,669 (GRCm39) H346R probably benign Het
Pom121l2 T A 13: 22,168,572 (GRCm39) C948S probably benign Het
Pspc1 A T 14: 56,999,404 (GRCm39) M284K possibly damaging Het
Ralgapa2 A G 2: 146,277,919 (GRCm39) L414S probably damaging Het
Rgs13 T A 1: 144,016,583 (GRCm39) K53N probably damaging Het
Rorc T C 3: 94,296,291 (GRCm39) S163P probably benign Het
Rpl3l A C 17: 24,952,984 (GRCm39) T315P possibly damaging Het
Rsph3b A G 17: 7,172,438 (GRCm39) V487A probably benign Het
Rusc2 A G 4: 43,416,080 (GRCm39) E462G probably damaging Het
Sez6l T C 5: 112,576,344 (GRCm39) T838A probably damaging Het
Slc22a14 A G 9: 119,008,561 (GRCm39) Y236H probably damaging Het
Sspo G A 6: 48,442,457 (GRCm39) R1984H probably damaging Het
Steap3 G T 1: 120,169,186 (GRCm39) D370E probably benign Het
Sumf1 A G 6: 108,085,393 (GRCm39) probably benign Het
Telo2 T C 17: 25,320,647 (GRCm39) E754G probably damaging Het
Tjp1 A G 7: 64,972,353 (GRCm39) F604L probably damaging Het
Trpm7 A T 2: 126,639,131 (GRCm39) D1734E probably benign Het
Tsfm A C 10: 126,864,242 (GRCm39) Y158D probably damaging Het
Ubtf T C 11: 102,197,591 (GRCm39) probably benign Het
Upk3a G T 15: 84,904,752 (GRCm39) V167F possibly damaging Het
Vmn2r19 C T 6: 123,292,939 (GRCm39) S327L probably benign Het
Vps13c T A 9: 67,858,965 (GRCm39) I2805N probably damaging Het
Zfp592 A G 7: 80,673,534 (GRCm39) D166G possibly damaging Het
Other mutations in Pate2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01475:Pate2 APN 9 35,580,998 (GRCm39) start codon destroyed probably null
IGL01729:Pate2 APN 9 35,581,888 (GRCm39) missense probably damaging 1.00
IGL03055:Pate2 APN 9 35,523,069 (GRCm39) splice site probably benign
foie_gras UTSW 9 35,581,797 (GRCm39) nonsense probably null
PIT4576001:Pate2 UTSW 9 35,581,889 (GRCm39) missense probably damaging 1.00
R1229:Pate2 UTSW 9 35,580,991 (GRCm39) missense probably damaging 0.98
R1397:Pate2 UTSW 9 35,580,991 (GRCm39) missense probably damaging 0.98
R2393:Pate2 UTSW 9 35,581,036 (GRCm39) splice site probably benign
R2426:Pate2 UTSW 9 35,581,776 (GRCm39) critical splice acceptor site probably null
R3407:Pate2 UTSW 9 35,582,262 (GRCm39) missense probably damaging 0.99
R4323:Pate2 UTSW 9 35,581,767 (GRCm39) splice site probably benign
R4716:Pate2 UTSW 9 35,596,978 (GRCm39) intron probably benign
R5023:Pate2 UTSW 9 35,597,407 (GRCm39) intron probably benign
R5057:Pate2 UTSW 9 35,597,407 (GRCm39) intron probably benign
R5384:Pate2 UTSW 9 35,581,837 (GRCm39) missense probably damaging 0.98
R5574:Pate2 UTSW 9 35,597,411 (GRCm39) intron probably benign
R5593:Pate2 UTSW 9 35,581,778 (GRCm39) missense possibly damaging 0.76
R5851:Pate2 UTSW 9 35,581,797 (GRCm39) nonsense probably null
R6510:Pate2 UTSW 9 35,581,018 (GRCm39) missense probably null 0.99
R6800:Pate2 UTSW 9 35,596,941 (GRCm39) intron probably benign
R6819:Pate2 UTSW 9 35,581,801 (GRCm39) missense probably damaging 1.00
R7531:Pate2 UTSW 9 35,582,008 (GRCm39) splice site probably null
R7765:Pate2 UTSW 9 35,581,197 (GRCm39) missense probably benign 0.15
R7842:Pate2 UTSW 9 35,581,829 (GRCm39) missense probably damaging 1.00
R8015:Pate2 UTSW 9 35,581,814 (GRCm39) missense probably damaging 0.99
R8957:Pate2 UTSW 9 35,596,911 (GRCm39) missense probably benign 0.03
R9126:Pate2 UTSW 9 35,581,908 (GRCm39) critical splice donor site probably null
Predicted Primers PCR Primer
(F):5'- GCACAAAGGATTACCACTGTG -3'
(R):5'- GCTGGTAAAACCCATGATGC -3'

Sequencing Primer
(F):5'- ACCACTGTGAGAGTTTCTACTG -3'
(R):5'- CTGGTAAAACCCATGATGCACTATGG -3'
Posted On 2015-09-24