Mutagenetix > Incidental Mutations

Incidental Mutation 'R0346:Rpl6'

34262

Institutional Source

Beutler Lab

Gene Symbol

Rpl6

Ensembl Gene

ENSMUSG00000029614

Gene Name

ribosomal protein L6

Synonyms

Taxreb107

MMRRC Submission

038553-MU

Accession Numbers

Is this an essential gene?

Probably essential (E-score: 0.955) question?

Stock #

R0346 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

121204481-121209241 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 121208491 bp

Zygosity

Heterozygous

Amino Acid Change

Lysine to Asparagine at position 218 (K218N)

Ref Sequence

ENSEMBL: ENSMUSP00000031617 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031617] [ENSMUST00000201155]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000031617
AA Change: K218N

PolyPhen 2 Score 0.525 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000031617
Gene: ENSMUSG00000029614
AA Change: K218N

Domain	Start	End	E-Value	Type
Pfam:Ribosomal_L6e_N	43	103	4.5e-36	PFAM
Pfam:Ribosomal_L6e	189	296	2.7e-49	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000082907

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000124330

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138621

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000139177

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000140515

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000146579

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000197044

Predicted Effect

unknown
Transcript: ENSMUST00000201155
AA Change: N73I

SMART Domains

Protein: ENSMUSP00000143981
Gene: ENSMUSG00000029614
AA Change: N73I

Domain	Start	End	E-Value	Type
Blast:Zn_pept	1	33	7e-11	BLAST
PDB:3J39\|E	2	45	3e-13	PDB

Meta Mutation Damage Score

0.1939

Coding Region Coverage

1x: 99.5%
3x: 98.9%
10x: 97.7%
20x: 96.4%

Validation Efficiency

100% (79/79)

Allele List at MGI

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca13	A	T	11: 9,566,278	I4406L	probably damaging	Het
Abca16	T	A	7: 120,435,932	C314S	probably damaging	Het
Add3	C	T	19: 53,216,956	R46*	probably null	Het
Alas1	A	T	9: 106,243,351	S82T	possibly damaging	Het
Alkbh5	C	G	11: 60,538,741	R107G	possibly damaging	Het
Ap3b1	A	T	13: 94,445,971	R365*	probably null	Het
Ass1	A	T	2: 31,514,819	N371Y	probably damaging	Het
AU021092	T	C	16: 5,216,854	D168G	possibly damaging	Het
Bcl2	G	A	1: 106,712,562	R107C	probably damaging	Het
Caln1	C	A	5: 130,822,921	H184N	possibly damaging	Het
Camta1	C	A	4: 151,075,140	R1614L	probably damaging	Het
Ccdc191	T	C	16: 43,938,952	V372A	probably damaging	Het
Ccng2	T	G	5: 93,270,894	I126S	probably damaging	Het
Cep85	A	T	4: 134,132,422	N643K	probably damaging	Het
Clvs2	G	C	10: 33,622,546	S129R	possibly damaging	Het
Cntn1	G	T	15: 92,232,087		probably benign	Het
Cttn	A	T	7: 144,452,539		probably benign	Het
Dedd2	T	C	7: 25,211,269	S161G	possibly damaging	Het
Dnajb13	T	C	7: 100,503,925	D263G	probably damaging	Het
Dppa4	T	A	16: 48,289,324		probably benign	Het
Ear2	A	G	14: 44,102,906	E7G	probably damaging	Het
Eif2b4	A	G	5: 31,188,108		probably benign	Het
Etl4	G	T	2: 20,759,652		probably null	Het
Fbxo15	T	A	18: 84,960,221		probably null	Het
Gm8765	T	C	13: 50,703,310	Y995H	probably benign	Het
Gm9970	A	G	5: 31,240,838		probably benign	Het
Hap1	A	G	11: 100,356,029	S17P	probably benign	Het
Hgd	C	T	16: 37,588,774		probably benign	Het
Inpp5f	T	A	7: 128,690,668	L16Q	probably damaging	Het
Islr2	G	A	9: 58,198,343	R545*	probably null	Het
Itgav	G	T	2: 83,792,609	C675F	probably damaging	Het
Kif13a	T	A	13: 46,814,219	I403L	possibly damaging	Het
Kif14	T	A	1: 136,468,160	I68N	probably damaging	Het
Kif26a	G	T	12: 112,179,348	K1764N	probably null	Het
Lrrd1	C	A	5: 3,850,215	F173L	probably benign	Het
Mroh4	G	C	15: 74,614,292		probably benign	Het
Mrvi1	T	C	7: 110,898,976	D404G	probably damaging	Het
Msh5	A	G	17: 35,029,888	V723A	probably benign	Het
Mybph	T	G	1: 134,197,754	I279S	probably damaging	Het
Myh4	A	T	11: 67,260,326	I1936L	probably benign	Het
Myo1h	A	T	5: 114,355,209	T704S	probably benign	Het
Nav2	C	A	7: 49,604,585	T2377K	probably benign	Het
Nipbl	T	G	15: 8,360,956	Q276H	probably damaging	Het
Nlrp9b	T	C	7: 20,024,515	L559P	probably damaging	Het
Nup210l	T	A	3: 90,189,438	V1318E	probably damaging	Het
Olfr1427	A	T	19: 12,099,439	S67T	probably damaging	Het
Olfr18	A	G	9: 20,314,411	S170P	probably benign	Het
Olfr385	A	G	11: 73,589,457	Y94H	probably damaging	Het
Olfr765	C	A	10: 129,046,473	V197F	possibly damaging	Het
P2ry13	T	C	3: 59,209,566	T264A	possibly damaging	Het
Plekhg5	T	C	4: 152,114,253	L966P	probably benign	Het
Prss35	A	G	9: 86,755,351	K58R	probably benign	Het
Ptafr	T	A	4: 132,580,079	L260*	probably null	Het
Pum1	A	T	4: 130,779,805	T1157S	possibly damaging	Het
Rif1	GCCACCA	GCCA	2: 52,110,324		probably benign	Het
Rnf145	A	G	11: 44,555,164	Y275C	probably damaging	Het
Rps6	T	C	4: 86,855,981	T128A	probably benign	Het
Ryr1	G	T	7: 29,067,588		probably benign	Het
Scel	A	T	14: 103,529,984	Q26H	probably damaging	Het
Sfxn4	A	T	19: 60,858,673	D57E	probably benign	Het
Slc35d1	A	C	4: 103,190,847	L240R	probably damaging	Het
Smcr8	A	G	11: 60,779,750	I575V	probably benign	Het
Syk	G	A	13: 52,640,659	M476I	probably damaging	Het
Tbcel	A	T	9: 42,437,243		probably benign	Het
Tob2	C	A	15: 81,858,223	G65W	probably damaging	Het
Trim16	A	G	11: 62,840,694	N464D	probably benign	Het
Trim36	T	C	18: 46,199,709		probably benign	Het
Trpv4	C	A	5: 114,630,529		probably benign	Het
Tsga10	T	A	1: 37,840,519	T64S	possibly damaging	Het
Ttc26	T	C	6: 38,409,435	C364R	probably damaging	Het
Vars2	A	T	17: 35,664,864		probably benign	Het
Vmn1r72	C	A	7: 11,669,694	V276L	probably benign	Het
Vps13a	T	A	19: 16,677,969	K1898N	probably benign	Het
Vps18	A	G	2: 119,297,164	M823V	probably damaging	Het
Washc2	T	C	6: 116,220,523		probably benign	Het
Zfp763	A	T	17: 33,019,747	H141Q	probably benign	Het

Other mutations in Rpl6

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02819:Rpl6	APN	5	121207201	splice site	probably benign
R0095:Rpl6	UTSW	5	121205839	missense	possibly damaging	0.62
R0095:Rpl6	UTSW	5	121205839	missense	possibly damaging	0.62
R0197:Rpl6	UTSW	5	121208478	missense	probably benign	0.18
R0883:Rpl6	UTSW	5	121208478	missense	probably benign	0.18
R0972:Rpl6	UTSW	5	121208502	missense	possibly damaging	0.75
R6005:Rpl6	UTSW	5	121205514	unclassified	probably benign
R6278:Rpl6	UTSW	5	121208849	missense	possibly damaging	0.94
R7021:Rpl6	UTSW	5	121208909	missense	probably benign	0.35
R7426:Rpl6	UTSW	5	121205592	missense	possibly damaging	0.69
R7488:Rpl6	UTSW	5	121208528	missense	probably benign	0.01
Z1177:Rpl6	UTSW	5	121206797	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- CCCAAGATGAGTTGTGAGCACTCTG -3'
(R):5'- AGAACCGCTTCCTGGGTTTAACAC -3'

Sequencing Primer
(F):5'- agagacaaatccaaaggaccag -3'
(R):5'- GGGTTTAACACTAAGTAGCCTCC -3'

Posted On

2013-05-09