Incidental Mutation 'R4592:Vmn2r79'
ID 342901
Institutional Source Beutler Lab
Gene Symbol Vmn2r79
Ensembl Gene ENSMUSG00000090362
Gene Name vomeronasal 2, receptor 79
Synonyms EG621430
MMRRC Submission 041808-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.093) question?
Stock # R4592 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 86645673-86687176 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 86653319 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Aspartic acid at position 528 (V528D)
Ref Sequence ENSEMBL: ENSMUSP00000132478 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164462]
AlphaFold E9Q067
Predicted Effect possibly damaging
Transcript: ENSMUST00000164462
AA Change: V528D

PolyPhen 2 Score 0.864 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000132478
Gene: ENSMUSG00000090362
AA Change: V528D

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 75 464 1.9e-31 PFAM
Pfam:NCD3G 506 559 3.1e-21 PFAM
Pfam:7tm_3 592 827 2.8e-53 PFAM
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 97.1%
  • 20x: 94.8%
Validation Efficiency 98% (64/65)
Allele List at MGI
Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933430I17Rik T A 4: 62,457,164 (GRCm39) V161E possibly damaging Het
Arhgap40 T C 2: 158,388,629 (GRCm39) V521A possibly damaging Het
Atrn T C 2: 130,841,050 (GRCm39) probably benign Het
Casp12 T C 9: 5,352,923 (GRCm39) probably benign Het
Cenpf G A 1: 189,411,230 (GRCm39) T318M probably damaging Het
Cfap119 C T 7: 127,184,663 (GRCm39) R172H probably benign Het
Clcn2 T C 16: 20,527,892 (GRCm39) K525E probably damaging Het
Cntln A G 4: 84,889,419 (GRCm39) T301A probably benign Het
Crat T C 2: 30,305,378 (GRCm39) probably benign Het
Cul5 A G 9: 53,545,027 (GRCm39) probably benign Het
Cxcl14 A T 13: 56,443,708 (GRCm39) I34N probably damaging Het
Cyp2b19 A G 7: 26,470,819 (GRCm39) I487V probably benign Het
Cyp4a10 T A 4: 115,386,690 (GRCm39) F446I probably damaging Het
D430041D05Rik T A 2: 104,063,824 (GRCm39) M659L possibly damaging Het
Dclk3 T C 9: 111,296,963 (GRCm39) F169S probably damaging Het
Ddx52 T C 11: 83,848,306 (GRCm39) I532T probably damaging Het
Dnm1 T C 2: 32,226,023 (GRCm39) D352G probably damaging Het
Eif4g2 T C 7: 110,677,509 (GRCm39) E174G probably damaging Het
Enpp6 G T 8: 47,546,067 (GRCm39) V386L probably damaging Het
Entr1 C A 2: 26,278,909 (GRCm39) probably benign Het
Eps15l1 T C 8: 73,095,238 (GRCm39) D904G probably damaging Het
Esrrb A G 12: 86,565,604 (GRCm39) Y356C probably damaging Het
Flt3 A T 5: 147,291,509 (GRCm39) S619T possibly damaging Het
Fndc7 A T 3: 108,766,218 (GRCm39) C716S probably damaging Het
Gm26996 T A 6: 130,556,448 (GRCm39) noncoding transcript Het
Grik2 A T 10: 49,298,711 (GRCm39) F50I possibly damaging Het
Guf1 T C 5: 69,723,786 (GRCm39) V367A possibly damaging Het
Hspg2 C T 4: 137,246,251 (GRCm39) R1010C probably damaging Het
Ifnar2 T C 16: 91,188,684 (GRCm39) V55A probably benign Het
Impg1 T A 9: 80,322,907 (GRCm39) I33F probably benign Het
Ltbp4 A C 7: 27,024,608 (GRCm39) V674G probably damaging Het
Mroh2b T A 15: 4,947,772 (GRCm39) L529H probably damaging Het
Negr1 T C 3: 156,914,023 (GRCm39) probably benign Het
Neurog3 A G 10: 61,969,599 (GRCm39) T25A probably damaging Het
Or10v1 T C 19: 11,874,126 (GRCm39) V247A probably benign Het
Or4a69 T A 2: 89,313,100 (GRCm39) K126N probably damaging Het
Or51h1 A C 7: 102,308,685 (GRCm39) Y219S probably damaging Het
Or5k17 T C 16: 58,746,455 (GRCm39) T160A probably benign Het
Pax8 T A 2: 24,333,201 (GRCm39) probably benign Het
Pcsk6 A C 7: 65,581,480 (GRCm39) I254L possibly damaging Het
Pde3a A G 6: 141,404,942 (GRCm39) K389R probably benign Het
Rab3gap1 C A 1: 127,852,996 (GRCm39) probably benign Het
Rbck1 G A 2: 152,160,653 (GRCm39) Q428* probably null Het
Rptor A G 11: 119,689,666 (GRCm39) D321G probably null Het
Sall2 C A 14: 52,551,260 (GRCm39) R643L probably damaging Het
Skp1 T C 11: 52,134,446 (GRCm39) I59T possibly damaging Het
Slc23a3 T G 1: 75,105,200 (GRCm39) N456T probably damaging Het
Slc4a7 G A 14: 14,778,850 (GRCm38) G920S probably damaging Het
Smarcd3 T C 5: 24,797,802 (GRCm39) I467V probably benign Het
Spata31d1c C T 13: 65,183,874 (GRCm39) A472V probably damaging Het
Spmap1 A G 11: 97,662,441 (GRCm39) S144P probably damaging Het
Srsf6 T C 2: 162,773,643 (GRCm39) I18T probably damaging Het
Stom C T 2: 35,213,758 (GRCm39) G80D probably damaging Het
Svep1 A T 4: 58,084,028 (GRCm39) Y1915N possibly damaging Het
Tmf1 C T 6: 97,150,361 (GRCm39) V449I probably benign Het
Triobp C T 15: 78,851,295 (GRCm39) A483V probably benign Het
Vdac1 G A 11: 52,265,799 (GRCm39) probably null Het
Vmn2r75 T G 7: 85,815,494 (GRCm39) E123D probably benign Het
Zdbf2 T G 1: 63,345,750 (GRCm39) N1376K possibly damaging Het
Zeb1os1 T C 18: 5,525,375 (GRCm39) noncoding transcript Het
Other mutations in Vmn2r79
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01401:Vmn2r79 APN 7 86,686,481 (GRCm39) missense probably benign 0.01
IGL01675:Vmn2r79 APN 7 86,645,856 (GRCm39) missense probably benign 0.01
IGL01760:Vmn2r79 APN 7 86,651,366 (GRCm39) missense probably benign
IGL01834:Vmn2r79 APN 7 86,686,354 (GRCm39) missense probably benign 0.01
IGL01843:Vmn2r79 APN 7 86,686,485 (GRCm39) missense probably damaging 1.00
IGL01914:Vmn2r79 APN 7 86,686,571 (GRCm39) missense probably benign 0.14
IGL01980:Vmn2r79 APN 7 86,686,290 (GRCm39) missense possibly damaging 0.49
IGL02438:Vmn2r79 APN 7 86,651,744 (GRCm39) missense probably damaging 0.98
IGL02740:Vmn2r79 APN 7 86,653,366 (GRCm39) missense probably benign 0.00
IGL03052:Vmn2r79 UTSW 7 86,652,799 (GRCm39) missense probably benign 0.00
PIT4445001:Vmn2r79 UTSW 7 86,651,408 (GRCm39) missense possibly damaging 0.46
R0096:Vmn2r79 UTSW 7 86,686,527 (GRCm39) missense probably damaging 1.00
R0096:Vmn2r79 UTSW 7 86,686,527 (GRCm39) missense probably damaging 1.00
R0270:Vmn2r79 UTSW 7 86,652,594 (GRCm39) missense probably benign 0.00
R0336:Vmn2r79 UTSW 7 86,651,287 (GRCm39) missense probably benign 0.15
R0418:Vmn2r79 UTSW 7 86,651,611 (GRCm39) missense probably benign 0.18
R1070:Vmn2r79 UTSW 7 86,652,681 (GRCm39) missense probably damaging 1.00
R1234:Vmn2r79 UTSW 7 86,653,307 (GRCm39) missense possibly damaging 0.71
R1459:Vmn2r79 UTSW 7 86,687,002 (GRCm39) missense probably benign 0.01
R1513:Vmn2r79 UTSW 7 86,686,652 (GRCm39) missense probably benign 0.01
R1624:Vmn2r79 UTSW 7 86,653,247 (GRCm39) critical splice acceptor site probably null
R1633:Vmn2r79 UTSW 7 86,687,042 (GRCm39) missense possibly damaging 0.52
R1676:Vmn2r79 UTSW 7 86,651,839 (GRCm39) missense probably benign
R1781:Vmn2r79 UTSW 7 86,651,555 (GRCm39) missense probably benign 0.00
R1794:Vmn2r79 UTSW 7 86,650,621 (GRCm39) missense probably benign 0.37
R1823:Vmn2r79 UTSW 7 86,687,080 (GRCm39) missense probably damaging 1.00
R2013:Vmn2r79 UTSW 7 86,653,289 (GRCm39) missense possibly damaging 0.50
R2018:Vmn2r79 UTSW 7 86,651,634 (GRCm39) missense probably benign 0.07
R2019:Vmn2r79 UTSW 7 86,651,634 (GRCm39) missense probably benign 0.07
R2177:Vmn2r79 UTSW 7 86,645,839 (GRCm39) missense possibly damaging 0.94
R2984:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R3719:Vmn2r79 UTSW 7 86,651,245 (GRCm39) missense probably benign 0.05
R3798:Vmn2r79 UTSW 7 86,651,402 (GRCm39) missense possibly damaging 0.88
R3969:Vmn2r79 UTSW 7 86,652,801 (GRCm39) missense probably damaging 1.00
R4182:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4183:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4245:Vmn2r79 UTSW 7 86,651,624 (GRCm39) missense possibly damaging 0.73
R4301:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4391:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4393:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4394:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4396:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4397:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4697:Vmn2r79 UTSW 7 86,687,168 (GRCm39) missense probably damaging 0.98
R4897:Vmn2r79 UTSW 7 86,650,675 (GRCm39) missense probably benign
R5016:Vmn2r79 UTSW 7 86,686,548 (GRCm39) missense probably benign 0.00
R5058:Vmn2r79 UTSW 7 86,651,423 (GRCm39) missense probably damaging 0.98
R5177:Vmn2r79 UTSW 7 86,651,177 (GRCm39) missense probably damaging 0.97
R6078:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R6079:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R6138:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R6257:Vmn2r79 UTSW 7 86,651,778 (GRCm39) missense probably benign 0.27
R6260:Vmn2r79 UTSW 7 86,686,365 (GRCm39) missense probably benign 0.00
R6307:Vmn2r79 UTSW 7 86,686,976 (GRCm39) missense probably damaging 1.00
R6323:Vmn2r79 UTSW 7 86,650,522 (GRCm39) missense probably benign 0.05
R6374:Vmn2r79 UTSW 7 86,651,498 (GRCm39) missense probably benign 0.02
R6530:Vmn2r79 UTSW 7 86,651,252 (GRCm39) missense possibly damaging 0.91
R6546:Vmn2r79 UTSW 7 86,652,741 (GRCm39) missense probably benign 0.01
R6682:Vmn2r79 UTSW 7 86,653,370 (GRCm39) missense possibly damaging 0.69
R6858:Vmn2r79 UTSW 7 86,686,580 (GRCm39) missense probably benign
R6965:Vmn2r79 UTSW 7 86,651,100 (GRCm39) missense probably benign 0.10
R7130:Vmn2r79 UTSW 7 86,651,474 (GRCm39) missense probably damaging 0.99
R7156:Vmn2r79 UTSW 7 86,686,851 (GRCm39) missense probably damaging 0.98
R7604:Vmn2r79 UTSW 7 86,652,592 (GRCm39) critical splice acceptor site probably null
R7691:Vmn2r79 UTSW 7 86,687,111 (GRCm39) missense probably damaging 0.96
R8055:Vmn2r79 UTSW 7 86,686,541 (GRCm39) missense possibly damaging 0.94
R8070:Vmn2r79 UTSW 7 86,651,336 (GRCm39) missense probably benign
R8073:Vmn2r79 UTSW 7 86,651,462 (GRCm39) missense probably benign 0.00
R8145:Vmn2r79 UTSW 7 86,686,862 (GRCm39) missense probably benign 0.02
R8263:Vmn2r79 UTSW 7 86,686,726 (GRCm39) missense possibly damaging 0.89
R8350:Vmn2r79 UTSW 7 86,686,741 (GRCm39) nonsense probably null
R8400:Vmn2r79 UTSW 7 86,651,308 (GRCm39) missense probably benign 0.00
R8814:Vmn2r79 UTSW 7 86,651,714 (GRCm39) missense probably benign 0.00
R8862:Vmn2r79 UTSW 7 86,645,712 (GRCm39) missense probably benign 0.23
R9146:Vmn2r79 UTSW 7 86,650,681 (GRCm39) nonsense probably null
R9276:Vmn2r79 UTSW 7 86,687,045 (GRCm39) missense probably damaging 1.00
R9361:Vmn2r79 UTSW 7 86,652,822 (GRCm39) critical splice donor site probably null
R9676:Vmn2r79 UTSW 7 86,686,452 (GRCm39) missense probably damaging 1.00
U15987:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
X0054:Vmn2r79 UTSW 7 86,653,270 (GRCm39) missense probably benign 0.01
Z1088:Vmn2r79 UTSW 7 86,651,549 (GRCm39) missense probably damaging 1.00
Z1176:Vmn2r79 UTSW 7 86,686,377 (GRCm39) missense probably benign
Z1176:Vmn2r79 UTSW 7 86,651,526 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GTAAAAGGAGATCTTTCGATGGC -3'
(R):5'- GCATGCAACCATAAGAAATGTGTGATC -3'

Sequencing Primer
(F):5'- AAAGGAGATCTTTCGATGGCTTTCTC -3'
(R):5'- CCTCACCTGTCATGTTGG -3'
Posted On 2015-09-24