Incidental Mutation 'R0064:Vmn1r24'
ID34398
Institutional Source Beutler Lab
Gene Symbol Vmn1r24
Ensembl Gene ENSMUSG00000115507
Gene Namevomeronasal 1 receptor 24
SynonymsV1rc18
MMRRC Submission 038356-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.290) question?
Stock #R0064 (G1)
Quality Score225
Status Validated
Chromosome6
Chromosomal Location57954707-57961503 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to G at 57956018 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Leucine at position 172 (I172L)
Ref Sequence ENSEMBL: ENSMUSP00000153775 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000175716] [ENSMUST00000228097] [ENSMUST00000228315]
Predicted Effect probably benign
Transcript: ENSMUST00000175716
AA Change: I172L

PolyPhen 2 Score 0.026 (Sensitivity: 0.95; Specificity: 0.81)
SMART Domains Protein: ENSMUSP00000134939
Gene: ENSMUSG00000093451
AA Change: I172L

DomainStartEndE-ValueType
Pfam:V1R 29 293 8.2e-55 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000228097
AA Change: I172L

PolyPhen 2 Score 0.026 (Sensitivity: 0.95; Specificity: 0.81)
Predicted Effect probably benign
Transcript: ENSMUST00000228315
AA Change: I172L

PolyPhen 2 Score 0.026 (Sensitivity: 0.95; Specificity: 0.81)
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 97.1%
  • 20x: 95.0%
Validation Efficiency 100% (55/55)
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca9 A C 11: 110,144,871 L641R probably damaging Het
Abca9 G T 11: 110,144,872 L641M probably damaging Het
Abhd18 A G 3: 40,933,853 I377M probably benign Het
Arhgef17 C A 7: 100,881,354 M1408I probably benign Het
Bcl2a1a G C 9: 88,957,463 G138A probably damaging Het
C4b A G 17: 34,738,856 L617P probably damaging Het
Ccdc25 T A 14: 65,854,112 I60K possibly damaging Het
Cdk1 T C 10: 69,345,077 D101G probably benign Het
Cdon A G 9: 35,489,227 H1079R probably benign Het
Cep126 A T 9: 8,130,182 probably benign Het
Cic T A 7: 25,287,140 S1299T probably damaging Het
Cic C A 7: 25,287,141 S1299Y probably damaging Het
Clstn1 G A 4: 149,634,796 V361M probably damaging Het
Crlf3 A G 11: 80,057,902 I239T possibly damaging Het
Cstf2t T A 19: 31,083,299 N78K probably damaging Het
Cul1 A G 6: 47,502,415 probably benign Het
D430041D05Rik T G 2: 104,249,157 T1194P probably damaging Het
Fbp2 A T 13: 62,854,048 F118I probably damaging Het
Fbxw14 A T 9: 109,287,592 Y16* probably null Het
Fgd3 T G 13: 49,296,425 D116A possibly damaging Het
Gm7168 C T 17: 13,949,859 T496I probably benign Het
Hsh2d G A 8: 72,200,460 D229N probably benign Het
Klhl5 T A 5: 65,141,288 S137T probably benign Het
Knl1 T A 2: 119,076,243 N1604K probably benign Het
Lpcat1 T A 13: 73,514,466 N463K probably damaging Het
Lpl A G 8: 68,892,704 H120R probably damaging Het
Man1a2 A T 3: 100,591,883 S412T possibly damaging Het
Mcc C G 18: 44,519,516 probably benign Het
Myo18a G T 11: 77,847,344 R1704L probably damaging Het
Nlrc3 G T 16: 3,964,087 T486K possibly damaging Het
Nrip1 T A 16: 76,294,670 probably benign Het
Nutf2 A G 8: 105,878,809 D92G probably damaging Het
Obscn A C 11: 59,027,466 V6260G probably damaging Het
Olfr320 G A 11: 58,684,475 V201M probably benign Het
Olfr714 T C 7: 107,074,280 F151L probably benign Het
Plce1 T C 19: 38,780,784 probably null Het
Pmpca C A 2: 26,395,507 D498E probably benign Het
Pnpla7 G T 2: 24,997,227 E28* probably null Het
Polg C A 7: 79,461,884 W206C probably damaging Het
Ptprt C T 2: 161,927,791 probably benign Het
Slc7a14 T C 3: 31,227,060 D367G probably damaging Het
Spata31 T C 13: 64,922,098 Y687H probably damaging Het
Sybu T A 15: 44,672,993 T646S probably benign Het
Thbs1 A T 2: 118,123,914 probably null Het
Tie1 A G 4: 118,489,701 V2A possibly damaging Het
Tma16 A T 8: 66,476,805 I179K possibly damaging Het
Tns3 G A 11: 8,435,856 Q1381* probably null Het
Trank1 A G 9: 111,343,195 D84G probably damaging Het
Ttc3 A T 16: 94,422,247 H197L possibly damaging Het
Urb1 A G 16: 90,779,140 F843L probably benign Het
Vmn2r1 T A 3: 64,104,788 I690N possibly damaging Het
Vmn2r111 T A 17: 22,572,072 I82L probably benign Het
Zfp287 A T 11: 62,714,938 L370H possibly damaging Het
Zfp608 A T 18: 54,898,816 I684N probably benign Het
Other mutations in Vmn1r24
AlleleSourceChrCoordTypePredicted EffectPPH Score
R1707:Vmn1r24 UTSW 6 57956512 missense probably benign 0.02
R2079:Vmn1r24 UTSW 6 57955670 missense probably benign 0.10
R4867:Vmn1r24 UTSW 6 57956436 missense probably damaging 0.96
R5321:Vmn1r24 UTSW 6 57956197 nonsense probably null
R6954:Vmn1r24 UTSW 6 57956452 missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- AGTCAGGATGACTGGGTCATACCTC -3'
(R):5'- TGTGGACCTGATCTCCTGTCAACTG -3'

Sequencing Primer
(F):5'- TACCAGCAGCAAGATAATCTGTG -3'
(R):5'- AGTGTATTCCAGGCTGTCAC -3'
Posted On2013-05-09