Mutagenetix > Incidental Mutation

Incidental Mutation 'R4585:Or4b1d'

343986

Institutional Source

Beutler Lab

Gene Symbol

Or4b1d

Ensembl Gene

ENSMUSG00000075066

Gene Name

olfactory receptor family 4 subfamily B member 1D

Synonyms

Olfr32, MOR227-9_p, MOR227-7P, MTPCR05, GA_x6K02T2Q125-51573576-51572650

MMRRC Submission

041806-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.074) question?

Stock #

R4585 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

89966617-89972640 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 89968558 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Aspartic acid at position 308 (E308D)

Ref Sequence

ENSEMBL: ENSMUSP00000149175 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099755] [ENSMUST00000213293] [ENSMUST00000214973] [ENSMUST00000215153] [ENSMUST00000215659] [ENSMUST00000215765]

AlphaFold

Q7TQZ0

Predicted Effect

probably benign
Transcript: ENSMUST00000099755
AA Change: E308D

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)

SMART Domains

Protein: ENSMUSP00000097344
Gene: ENSMUSG00000075066
AA Change: E308D

Domain	Start	End	E-Value	Type
Pfam:7tm_4	28	302	1.7e-52	PFAM
Pfam:7tm_1	38	284	6.8e-21	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000213293

Predicted Effect

probably benign
Transcript: ENSMUST00000214973

Predicted Effect

probably benign
Transcript: ENSMUST00000215153
AA Change: E308D

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)

Predicted Effect

probably benign
Transcript: ENSMUST00000215659
AA Change: E308D

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)

Predicted Effect

probably benign
Transcript: ENSMUST00000215765
AA Change: E308D

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 97.1%
20x: 94.8%

Validation Efficiency

99% (90/91)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 84 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Akap9	T	C	5: 4,026,151 (GRCm39)	S1269P	probably benign	Het
Akr7a5	G	T	4: 139,038,238 (GRCm39)	R58L	probably benign	Het
Art2a	A	T	7: 101,203,956 (GRCm39)	L194*	probably null	Het
Aurkaip1	C	A	4: 155,917,091 (GRCm39)	A113D	possibly damaging	Het
Bsn	T	C	9: 107,987,662 (GRCm39)		probably benign	Het
Ccdc175	T	G	12: 72,221,953 (GRCm39)	D123A	possibly damaging	Het
Ccdc7b	A	G	8: 129,837,401 (GRCm39)	T131A	probably benign	Het
Ccnt2	T	C	1: 127,730,766 (GRCm39)	S548P	probably damaging	Het
Cep126	T	C	9: 8,103,338 (GRCm39)	Q224R	probably damaging	Het
Cic	A	T	7: 24,972,203 (GRCm39)	I645L	probably benign	Het
Cngb1	C	T	8: 96,023,756 (GRCm39)		probably null	Het
Col13a1	T	C	10: 61,723,024 (GRCm39)		probably null	Het
Corin	A	T	5: 72,487,042 (GRCm39)	V706D	probably damaging	Het
Crebrf	A	G	17: 26,981,229 (GRCm39)	K535R	probably damaging	Het
Cuzd1	G	A	7: 130,916,529 (GRCm39)	P310L	probably damaging	Het
Cxcr5	T	A	9: 44,425,442 (GRCm39)	I72F	probably benign	Het
Dapp1	T	C	3: 137,644,932 (GRCm39)	Q148R	probably benign	Het
Dcaf17	T	A	2: 70,918,924 (GRCm39)	S499R	probably benign	Het
Defb3	A	T	8: 19,345,172 (GRCm39)	I43F	possibly damaging	Het
Dlgap2	G	A	8: 14,777,999 (GRCm39)		probably null	Het
Dnah8	A	G	17: 30,970,541 (GRCm39)	D2684G	probably benign	Het
Dnajc10	T	G	2: 80,178,122 (GRCm39)	F710V	probably damaging	Het
Ep400	G	A	5: 110,901,725 (GRCm39)	T464I	probably damaging	Het
Epc1	G	A	18: 6,441,157 (GRCm39)	Q14*	probably null	Het
Eral1	A	T	11: 77,969,130 (GRCm39)	N123K	probably damaging	Het
Ercc5	G	A	1: 44,198,017 (GRCm39)	V145I	probably benign	Het
Evc	A	G	5: 37,481,057 (GRCm39)	S263P	probably damaging	Het
Fancc	A	T	13: 63,495,378 (GRCm39)	M182K	probably benign	Het
Fbxl3	G	T	14: 103,320,526 (GRCm39)	A355E	probably damaging	Het
Glra3	C	A	8: 56,542,028 (GRCm39)	T257K	probably damaging	Het
Gm12789	A	G	4: 101,847,159 (GRCm39)	Y148C	possibly damaging	Het
Gm14393	C	A	2: 174,904,497 (GRCm39)		probably benign	Het
Gm19965	T	A	1: 116,749,508 (GRCm39)	N396K	probably benign	Het
Gm27013	A	T	6: 130,498,003 (GRCm39)		noncoding transcript	Het
Gmcl1	A	G	6: 86,699,605 (GRCm39)	S141P	probably damaging	Het
Gsdmd	T	A	15: 75,737,600 (GRCm39)		probably null	Het
Gtf2a1	C	T	12: 91,529,700 (GRCm39)	V338I	possibly damaging	Het
H2ac15	T	C	13: 21,937,882 (GRCm39)	N39S	possibly damaging	Het
Hap1	G	A	11: 100,245,550 (GRCm39)	T138M	probably benign	Het
Ints2	G	T	11: 86,140,101 (GRCm39)	R244S	probably damaging	Het
Itgb4	T	C	11: 115,884,151 (GRCm39)	V945A	probably damaging	Het
Itih2	C	T	2: 10,115,211 (GRCm39)	S387N	probably benign	Het
Klra2	T	A	6: 131,207,120 (GRCm39)	D163V	probably benign	Het
Lctl	T	C	9: 64,038,882 (GRCm39)	S324P	probably damaging	Het
Lrrc24	C	A	15: 76,607,889 (GRCm39)	R43L	probably damaging	Het
Mogs	G	T	6: 83,095,619 (GRCm39)	R812L	possibly damaging	Het
Mroh5	T	A	15: 73,661,120 (GRCm39)	T467S	probably benign	Het
Mtap	G	A	4: 89,090,511 (GRCm39)	V194I	probably benign	Het
Myoz1	A	G	14: 20,700,663 (GRCm39)	W185R	probably damaging	Het
Nufip2	T	C	11: 77,632,554 (GRCm39)	V690A	unknown	Het
Obox1	A	T	7: 15,290,152 (GRCm39)	N165I	possibly damaging	Het
Or1j1	C	T	2: 36,702,537 (GRCm39)	C189Y	probably damaging	Het
Or4c113	T	G	2: 88,885,498 (GRCm39)	I91L	possibly damaging	Het
Or6c35	A	G	10: 129,169,142 (GRCm39)	T131A	probably benign	Het
Pabpc6	A	G	17: 9,888,002 (GRCm39)	L183P	probably damaging	Het
Pcdh15	C	T	10: 74,460,116 (GRCm39)	R1355W	probably damaging	Het
Pcdhgb8	C	A	18: 37,895,413 (GRCm39)	A161E	probably benign	Het
Pex1	A	G	5: 3,683,885 (GRCm39)	Y1127C	probably damaging	Het
Phc2	A	T	4: 128,637,303 (GRCm39)	H563L	probably damaging	Het
Plekha2	C	A	8: 25,533,685 (GRCm39)	E291*	probably null	Het
Qser1	C	A	2: 104,617,138 (GRCm39)	V1225L	probably benign	Het
Ralgapa2	A	T	2: 146,156,944 (GRCm39)	D1882E	probably damaging	Het
Rgs17	T	C	10: 5,792,596 (GRCm39)	D70G	probably benign	Het
Runx1t1	A	T	4: 13,889,864 (GRCm39)	T598S	unknown	Het
Scn2a	T	A	2: 65,573,395 (GRCm39)		probably null	Het
Serpinb10	T	A	1: 107,474,779 (GRCm39)	C314S	probably benign	Het
Setbp1	A	C	18: 79,130,164 (GRCm39)	S23A	probably benign	Het
Sh3pxd2b	A	G	11: 32,346,479 (GRCm39)	D116G	possibly damaging	Het
Slc4a1	G	T	11: 102,252,245 (GRCm39)		probably benign	Het
Snx19	T	C	9: 30,351,491 (GRCm39)	L155P	probably damaging	Het
Sox2	A	G	3: 34,705,193 (GRCm39)	N210S	probably benign	Het
Spag6	T	C	2: 18,736,958 (GRCm39)		probably null	Het
Speer4b	A	T	5: 27,703,036 (GRCm39)	L154Q	probably null	Het
Strn3	T	A	12: 51,696,953 (GRCm39)	E259D	probably benign	Het
Tenm1	G	A	X: 41,626,856 (GRCm39)	Q1931*	probably null	Het
Trp53bp1	C	G	2: 121,038,432 (GRCm39)	G1469R	probably damaging	Het
Ttc8	C	A	12: 98,948,789 (GRCm39)	Q492K	probably benign	Het
Ttn	T	C	2: 76,798,747 (GRCm39)	H509R	probably benign	Het
Utrn	T	A	10: 12,564,050 (GRCm39)	H1270L	probably benign	Het
Vopp1	G	A	6: 57,731,533 (GRCm39)	P153S	probably damaging	Het
Wdfy4	T	A	14: 32,809,912 (GRCm39)	I1770F	possibly damaging	Het
Zfp14	G	T	7: 29,738,341 (GRCm39)	Q215K	probably damaging	Het
Zfp473	A	T	7: 44,382,376 (GRCm39)	Y651*	probably null	Het
Zfp735	G	T	11: 73,580,550 (GRCm39)	E16D	possibly damaging	Het

Other mutations in Or4b1d

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01328:Or4b1d	APN	2	89,969,418 (GRCm39)	missense	probably benign	0.30
IGL01976:Or4b1d	APN	2	89,969,268 (GRCm39)	missense	probably damaging	1.00
IGL02076:Or4b1d	APN	2	89,969,159 (GRCm39)	missense	probably damaging	1.00
IGL03030:Or4b1d	APN	2	89,969,006 (GRCm39)	missense	possibly damaging	0.93
IGL03235:Or4b1d	APN	2	89,969,414 (GRCm39)	missense	possibly damaging	0.88
IGL03410:Or4b1d	APN	2	89,969,489 (GRCm39)	start gained	probably benign
R1240:Or4b1d	UTSW	2	89,969,157 (GRCm39)	missense	possibly damaging	0.48
R1511:Or4b1d	UTSW	2	89,968,748 (GRCm39)	missense	probably benign	0.13
R1602:Or4b1d	UTSW	2	89,969,399 (GRCm39)	missense	probably damaging	1.00
R1828:Or4b1d	UTSW	2	89,968,931 (GRCm39)	missense	probably damaging	0.99
R2023:Or4b1d	UTSW	2	89,969,200 (GRCm39)	nonsense	probably null
R2177:Or4b1d	UTSW	2	89,968,808 (GRCm39)	missense	possibly damaging	0.70
R2679:Or4b1d	UTSW	2	89,968,889 (GRCm39)	missense	possibly damaging	0.93
R4490:Or4b1d	UTSW	2	89,969,261 (GRCm39)	missense	probably damaging	0.97
R4586:Or4b1d	UTSW	2	89,968,558 (GRCm39)	missense	probably benign	0.01
R4649:Or4b1d	UTSW	2	89,969,432 (GRCm39)	missense	probably damaging	0.99
R4688:Or4b1d	UTSW	2	89,969,343 (GRCm39)	missense	possibly damaging	0.80
R4694:Or4b1d	UTSW	2	89,968,593 (GRCm39)	nonsense	probably null
R5245:Or4b1d	UTSW	2	89,968,606 (GRCm39)	missense	probably damaging	1.00
R5509:Or4b1d	UTSW	2	89,969,236 (GRCm39)	missense	probably damaging	1.00
R5991:Or4b1d	UTSW	2	89,968,578 (GRCm39)	nonsense	probably null
R6004:Or4b1d	UTSW	2	89,969,343 (GRCm39)	missense	probably benign	0.32
R6128:Or4b1d	UTSW	2	89,968,954 (GRCm39)	nonsense	probably null
R6519:Or4b1d	UTSW	2	89,969,156 (GRCm39)	missense	possibly damaging	0.90
R7472:Or4b1d	UTSW	2	89,968,668 (GRCm39)	missense	probably damaging	1.00
R7892:Or4b1d	UTSW	2	89,968,836 (GRCm39)	missense	probably benign	0.00
R8017:Or4b1d	UTSW	2	89,969,170 (GRCm39)	missense	probably benign	0.02
R8046:Or4b1d	UTSW	2	89,969,159 (GRCm39)	missense	probably damaging	1.00
R8464:Or4b1d	UTSW	2	89,968,947 (GRCm39)	missense	possibly damaging	0.67
R8712:Or4b1d	UTSW	2	89,969,114 (GRCm39)	missense	probably damaging	1.00
R8998:Or4b1d	UTSW	2	89,969,472 (GRCm39)	missense	probably benign
R9789:Or4b1d	UTSW	2	89,969,004 (GRCm39)	missense	probably benign	0.23
X0066:Or4b1d	UTSW	2	89,968,734 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CCACACATTAGAGAAGTTCTATTCC -3'
(R):5'- TGCCTCTCACATCATGGTGG -3'

Sequencing Primer
(F):5'- AAGTTCTATTCCTAAATCGTACACAC -3'
(R):5'- TCTCACATCATGGTGGTTGTC -3'

Posted On

2015-09-24