Incidental Mutation 'R4615:Ulk1'
ID 345016
Institutional Source Beutler Lab
Gene Symbol Ulk1
Ensembl Gene ENSMUSG00000029512
Gene Name unc-51 like kinase 1
Synonyms Unc51.1
MMRRC Submission 041826-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4615 (G1)
Quality Score 225
Status Not validated
Chromosome 5
Chromosomal Location 110932354-110957963 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 110936912 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Asparagine at position 3 (T3N)
Ref Sequence ENSEMBL: ENSMUSP00000143308 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000031490] [ENSMUST00000196094] [ENSMUST00000198561] [ENSMUST00000200299]
AlphaFold no structure available at present
Predicted Effect probably damaging
Transcript: ENSMUST00000031490
AA Change: T694N

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000031490
Gene: ENSMUSG00000029512
AA Change: T694N

DomainStartEndE-ValueType
S_TKc 16 278 3.6e-98 SMART
low complexity region 287 318 N/A INTRINSIC
low complexity region 340 356 N/A INTRINSIC
low complexity region 400 423 N/A INTRINSIC
Blast:S_TKc 459 837 1e-131 BLAST
Pfam:DUF3543 838 1048 1.8e-26 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000196094
Predicted Effect noncoding transcript
Transcript: ENSMUST00000196440
Predicted Effect noncoding transcript
Transcript: ENSMUST00000196883
Predicted Effect noncoding transcript
Transcript: ENSMUST00000197768
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198470
Predicted Effect probably damaging
Transcript: ENSMUST00000198561
AA Change: T3N

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000143308
Gene: ENSMUSG00000029512
AA Change: T3N

DomainStartEndE-ValueType
Blast:S_TKc 1 75 5e-24 BLAST
Predicted Effect probably damaging
Transcript: ENSMUST00000200299
AA Change: T700N

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000143536
Gene: ENSMUSG00000029512
AA Change: T700N

DomainStartEndE-ValueType
S_TKc 16 278 7.47e-96 SMART
low complexity region 287 318 N/A INTRINSIC
low complexity region 340 356 N/A INTRINSIC
low complexity region 400 423 N/A INTRINSIC
Blast:S_TKc 459 843 1e-129 BLAST
Pfam:DUF3543 844 1054 1.4e-29 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199717
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200099
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199568
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.1%
Validation Efficiency
MGI Phenotype PHENOTYPE: Null homozygotes have blood defects including an increase in mean corpuscular volume and the presence of red blood cells that contain mitochondria. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca12 T C 1: 71,369,493 (GRCm39) I363V probably benign Het
Abcc9 C G 6: 142,634,833 (GRCm39) A144P possibly damaging Het
Adgrv1 C T 13: 81,642,688 (GRCm39) probably null Het
Adprhl1 A G 8: 13,292,250 (GRCm39) probably null Het
Angptl3 A T 4: 98,919,598 (GRCm39) E119D probably benign Het
Atp8b1 T C 18: 64,686,170 (GRCm39) N671S probably null Het
C9 A G 15: 6,520,944 (GRCm39) D51G probably damaging Het
Carmil2 A G 8: 106,421,706 (GRCm39) D1019G possibly damaging Het
Cdh8 A T 8: 100,006,254 (GRCm39) I111K probably damaging Het
Cep120 T C 18: 53,847,913 (GRCm39) R649G probably damaging Het
Clptm1l A T 13: 73,755,857 (GRCm39) K158* probably null Het
Cmtm1 CGGCACGTACTGAAGGTCGCTGACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTGGATGGT CGGCACGTACTGAAGGTCGCTGACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTGGATGGT 8: 105,036,102 (GRCm39) probably benign Het
Cnga1 A C 5: 72,762,117 (GRCm39) L466V probably damaging Het
Cpsf1 T C 15: 76,481,137 (GRCm39) T1240A possibly damaging Het
Cubn A G 2: 13,433,560 (GRCm39) S1117P probably damaging Het
Cyp2b9 T A 7: 25,900,550 (GRCm39) L396Q probably damaging Het
Cyp8b1 A T 9: 121,745,164 (GRCm39) L56* probably null Het
Dcbld2 A G 16: 58,276,457 (GRCm39) T458A probably benign Het
Dio2 G T 12: 90,696,595 (GRCm39) P131Q probably damaging Het
Dlg5 T C 14: 24,208,236 (GRCm39) Y990C probably damaging Het
Dsc3 T C 18: 20,104,545 (GRCm39) D594G possibly damaging Het
Dsp A G 13: 38,375,608 (GRCm39) E1131G probably damaging Het
Fdx1 A T 9: 51,859,945 (GRCm39) Y21* probably null Het
Gal3st4 A G 5: 138,264,525 (GRCm39) V158A probably damaging Het
Gm10269 T A 18: 20,815,820 (GRCm39) E67D probably benign Het
Gm5773 A G 3: 93,681,339 (GRCm39) H337R probably benign Het
Gng2 C T 14: 19,941,395 (GRCm39) V16I possibly damaging Het
Gpr20 T C 15: 73,567,585 (GRCm39) N268S probably benign Het
Ighv1-82 T C 12: 115,916,280 (GRCm39) T77A probably benign Het
Itprid2 A G 2: 79,492,726 (GRCm39) E1091G probably damaging Het
Lama2 C A 10: 26,857,520 (GRCm39) V3110F probably damaging Het
Mplkipl1 C T 19: 61,164,364 (GRCm39) G24R unknown Het
Mtmr4 T C 11: 87,501,761 (GRCm39) L548S probably damaging Het
Ncapg A T 5: 45,844,741 (GRCm39) M579L probably benign Het
Oog3 A T 4: 143,884,899 (GRCm39) Y346N probably benign Het
Or10ak14 T C 4: 118,611,334 (GRCm39) T134A probably benign Het
Or14c39 T C 7: 86,343,936 (GRCm39) S91P probably damaging Het
Orm2 A G 4: 63,281,536 (GRCm39) D89G probably damaging Het
Pcdhb4 T A 18: 37,441,553 (GRCm39) S288T probably benign Het
Pcsk2 G T 2: 143,637,889 (GRCm39) C375F probably damaging Het
Pdcd10 T C 3: 75,428,398 (GRCm39) I138M probably damaging Het
Pde8a T C 7: 80,970,485 (GRCm39) W536R probably damaging Het
Phkg2 C T 7: 127,176,792 (GRCm39) R61W probably damaging Het
Plcl1 A T 1: 55,737,293 (GRCm39) N878I probably benign Het
Prkdc A T 16: 15,480,938 (GRCm39) D353V probably damaging Het
Psme4 C T 11: 30,784,287 (GRCm39) T954I probably benign Het
Ran A G 5: 129,099,162 (GRCm39) I115V probably benign Het
Reln A G 5: 22,177,870 (GRCm39) L1867P possibly damaging Het
S100a1 A G 3: 90,418,562 (GRCm39) V84A possibly damaging Het
Sall2 G A 14: 52,550,207 (GRCm39) P994L probably benign Het
Shtn1 A T 19: 59,010,648 (GRCm39) I273N probably benign Het
Slc17a9 T C 2: 180,373,699 (GRCm39) I40T probably benign Het
Slc29a2 T C 19: 5,079,292 (GRCm39) V305A probably damaging Het
Taar2 T A 10: 23,817,263 (GRCm39) F268I probably benign Het
Taf3 G A 2: 9,956,901 (GRCm39) T422I probably damaging Het
Tgs1 T C 4: 3,585,156 (GRCm39) F99L probably damaging Het
Tox2 T C 2: 163,162,567 (GRCm39) L479P probably damaging Het
Ttn A G 2: 76,597,219 (GRCm39) I19898T probably damaging Het
Vars1 A T 17: 35,232,857 (GRCm39) K900N probably damaging Het
Vmn2r15 A G 5: 109,441,348 (GRCm39) V170A possibly damaging Het
Vmn2r53 A T 7: 12,316,229 (GRCm39) L530Q probably damaging Het
Zar1l G T 5: 150,441,528 (GRCm39) Q33K probably benign Het
Zdhhc16 T C 19: 41,932,122 (GRCm39) V358A possibly damaging Het
Other mutations in Ulk1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00163:Ulk1 APN 5 110,935,738 (GRCm39) missense probably damaging 1.00
IGL00916:Ulk1 APN 5 110,940,877 (GRCm39) missense probably damaging 1.00
IGL00951:Ulk1 APN 5 110,940,270 (GRCm39) missense possibly damaging 0.85
IGL02404:Ulk1 APN 5 110,944,100 (GRCm39) splice site probably null
IGL02415:Ulk1 APN 5 110,935,487 (GRCm39) missense probably damaging 1.00
IGL02500:Ulk1 APN 5 110,957,000 (GRCm39) missense probably damaging 1.00
IGL02696:Ulk1 APN 5 110,940,918 (GRCm39) missense probably damaging 1.00
R0086:Ulk1 UTSW 5 110,935,573 (GRCm39) splice site probably benign
R0092:Ulk1 UTSW 5 110,944,193 (GRCm39) missense probably null 1.00
R0158:Ulk1 UTSW 5 110,936,810 (GRCm39) splice site probably benign
R0387:Ulk1 UTSW 5 110,936,663 (GRCm39) missense possibly damaging 0.91
R0453:Ulk1 UTSW 5 110,938,951 (GRCm39) missense probably damaging 1.00
R0837:Ulk1 UTSW 5 110,937,411 (GRCm39) splice site probably benign
R1244:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R1245:Ulk1 UTSW 5 110,937,206 (GRCm39) critical splice donor site probably null
R1268:Ulk1 UTSW 5 110,938,143 (GRCm39) missense probably damaging 1.00
R1342:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R1586:Ulk1 UTSW 5 110,937,382 (GRCm39) missense probably damaging 1.00
R1590:Ulk1 UTSW 5 110,943,632 (GRCm39) missense probably damaging 1.00
R1816:Ulk1 UTSW 5 110,935,697 (GRCm39) missense probably damaging 1.00
R1837:Ulk1 UTSW 5 110,937,247 (GRCm39) missense probably damaging 1.00
R1924:Ulk1 UTSW 5 110,938,936 (GRCm39) missense probably damaging 0.97
R1992:Ulk1 UTSW 5 110,935,017 (GRCm39) missense probably damaging 1.00
R2126:Ulk1 UTSW 5 110,940,302 (GRCm39) missense probably benign 0.27
R2276:Ulk1 UTSW 5 110,936,028 (GRCm39) missense probably benign 0.00
R2310:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2311:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2312:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2760:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2762:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2763:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2764:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R2859:Ulk1 UTSW 5 110,942,495 (GRCm39) missense probably damaging 1.00
R2932:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R3760:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R3761:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R3762:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R3763:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R4334:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R4419:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R4471:Ulk1 UTSW 5 110,937,223 (GRCm39) missense probably benign 0.03
R4776:Ulk1 UTSW 5 110,936,813 (GRCm39) critical splice donor site probably null
R4820:Ulk1 UTSW 5 110,939,996 (GRCm39) missense probably benign
R4912:Ulk1 UTSW 5 110,935,455 (GRCm39) missense probably damaging 1.00
R6299:Ulk1 UTSW 5 110,938,963 (GRCm39) missense possibly damaging 0.78
R6754:Ulk1 UTSW 5 110,938,259 (GRCm39) missense possibly damaging 0.91
R7233:Ulk1 UTSW 5 110,956,908 (GRCm39) missense probably damaging 1.00
R7724:Ulk1 UTSW 5 110,940,270 (GRCm39) missense probably benign 0.44
R7751:Ulk1 UTSW 5 110,957,078 (GRCm39) missense probably damaging 1.00
R7823:Ulk1 UTSW 5 110,946,780 (GRCm39) missense probably damaging 1.00
R8379:Ulk1 UTSW 5 110,935,531 (GRCm39) missense probably damaging 1.00
R8489:Ulk1 UTSW 5 110,947,002 (GRCm39) nonsense probably null
R8880:Ulk1 UTSW 5 110,934,288 (GRCm39) missense probably damaging 1.00
R9214:Ulk1 UTSW 5 110,936,663 (GRCm39) missense possibly damaging 0.82
X0025:Ulk1 UTSW 5 110,939,995 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- ATGCAGAGTCCCTCCAAAGC -3'
(R):5'- AACTCATCTTGTGCTGCTGGC -3'

Sequencing Primer
(F):5'- CTCCAAAGCCAGCAGAGGG -3'
(R):5'- ATTTGTGCCCCAGCCTGG -3'
Posted On 2015-09-25