Incidental Mutation 'R4599:Prmt7'
ID 345442
Institutional Source Beutler Lab
Gene Symbol Prmt7
Ensembl Gene ENSMUSG00000060098
Gene Name protein arginine N-methyltransferase 7
Synonyms 4933402B05Rik
MMRRC Submission 041815-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.897) question?
Stock # R4599 (G1)
Quality Score 225
Status Not validated
Chromosome 8
Chromosomal Location 106937686-106978326 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 106976961 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Glycine at position 558 (S558G)
Ref Sequence ENSEMBL: ENSMUSP00000071521 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000067512] [ENSMUST00000071592] [ENSMUST00000212896]
AlphaFold Q922X9
PDB Structure Crystal structure of mouse protein arginine methyltransferase 7 in complex with SAH [X-RAY DIFFRACTION]
Predicted Effect probably benign
Transcript: ENSMUST00000067512
SMART Domains Protein: ENSMUSP00000069255
Gene: ENSMUSG00000031906

DomainStartEndE-ValueType
transmembrane domain 15 37 N/A INTRINSIC
transmembrane domain 57 79 N/A INTRINSIC
low complexity region 178 189 N/A INTRINSIC
Pfam:Exo_endo_phos 321 639 1.2e-15 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000071592
AA Change: S558G

PolyPhen 2 Score 0.801 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000071521
Gene: ENSMUSG00000060098
AA Change: S558G

DomainStartEndE-ValueType
Pfam:PrmA 53 148 1.6e-7 PFAM
internal_repeat_1 382 652 1.71e-8 PROSPERO
Predicted Effect noncoding transcript
Transcript: ENSMUST00000180410
Predicted Effect probably benign
Transcript: ENSMUST00000212896
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.4%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Arginine methylation is an apparently irreversible protein modification catalyzed by arginine methyltransferases, such as PMT7, using S-adenosylmethionine (AdoMet) as the methyl donor. Arginine methylation is implicated in signal transduction, RNA transport, and RNA splicing (Miranda et al., 2004 [PubMed 15044439]).[supplied by OMIM, Mar 2008]
Allele List at MGI
Other mutations in this stock
Total: 69 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca14 T C 7: 119,854,626 (GRCm39) V930A probably benign Het
Ankrd13b T C 11: 77,362,494 (GRCm39) R677G probably benign Het
Apc T A 18: 34,451,040 (GRCm39) Y2611* probably null Het
Apold1 A G 6: 134,961,032 (GRCm39) Y162C probably damaging Het
Atp6v0a4 T C 6: 38,055,737 (GRCm39) I325V probably benign Het
Cab39 A G 1: 85,776,050 (GRCm39) Y249C probably damaging Het
Cd22 T A 7: 30,575,325 (GRCm39) H239L probably damaging Het
Chrna7 A G 7: 62,753,538 (GRCm39) M327T probably damaging Het
Cimip2b T C 4: 43,427,574 (GRCm39) H250R possibly damaging Het
Clock T C 5: 76,383,657 (GRCm39) M499V probably benign Het
Clspn A G 4: 126,475,253 (GRCm39) E1002G probably benign Het
Clta C T 4: 44,012,819 (GRCm39) P10S probably damaging Het
Col5a3 A G 9: 20,685,855 (GRCm39) probably null Het
Coq6 T C 12: 84,408,913 (GRCm39) V30A probably benign Het
Csmd2 G T 4: 127,881,921 (GRCm39) R20L probably benign Het
D430041D05Rik A T 2: 104,038,528 (GRCm39) V1547D probably damaging Het
Dapk1 C T 13: 60,865,861 (GRCm39) P153S probably benign Het
Dock2 T A 11: 34,189,536 (GRCm39) Y1545F probably damaging Het
Dpp6 G T 5: 27,839,546 (GRCm39) G354C probably damaging Het
Dyrk1b T C 7: 27,881,856 (GRCm39) L105P probably damaging Het
Epor A G 9: 21,873,155 (GRCm39) S86P probably benign Het
Gale C A 4: 135,695,148 (GRCm39) S341* probably null Het
Galnt4 T A 10: 98,945,355 (GRCm39) V360E probably damaging Het
Gart A T 16: 91,419,833 (GRCm39) C24* probably null Het
Gcnt2 G T 13: 41,040,966 (GRCm39) V42L probably benign Het
Herc6 A G 6: 57,636,698 (GRCm39) I805V probably benign Het
Ints12 T A 3: 132,804,214 (GRCm39) I67N probably benign Het
Irx1 C A 13: 72,108,232 (GRCm39) R150L probably damaging Het
Kif26b A G 1: 178,358,024 (GRCm39) Y45C unknown Het
Krt35 T C 11: 99,984,834 (GRCm39) T275A probably damaging Het
Laptm5 G T 4: 130,643,316 (GRCm39) probably benign Het
Lin7a T C 10: 107,248,027 (GRCm39) S111P unknown Het
Med27 A G 2: 29,414,470 (GRCm39) D159G probably damaging Het
Msh2 A G 17: 88,016,006 (GRCm39) K546R probably damaging Het
Myo1a A T 10: 127,556,020 (GRCm39) probably null Het
Myo1c T C 11: 75,559,019 (GRCm39) F604L probably damaging Het
Myrip A G 9: 120,293,850 (GRCm39) K782E probably damaging Het
Ndc80 T C 17: 71,828,063 (GRCm39) D88G probably damaging Het
Nrxn2 A G 19: 6,505,282 (GRCm39) D375G probably damaging Het
Or2y10 T C 11: 49,455,545 (GRCm39) S266P probably damaging Het
Or52e7 A G 7: 104,685,280 (GRCm39) I292V probably benign Het
Padi3 T C 4: 140,525,422 (GRCm39) H187R probably damaging Het
Pcdhgb1 A T 18: 37,814,610 (GRCm39) N367I probably damaging Het
Pdrg1 T C 2: 152,854,310 (GRCm39) I77V probably benign Het
Pfas T C 11: 68,881,895 (GRCm39) E930G probably benign Het
Pik3cb C T 9: 98,943,817 (GRCm39) R662Q probably benign Het
Pla2g4e T G 2: 120,016,863 (GRCm39) H226P possibly damaging Het
Plxnd1 A T 6: 115,971,237 (GRCm39) V177E probably damaging Het
Pspc1 A C 14: 57,015,246 (GRCm39) probably null Het
Rilp T C 11: 75,403,586 (GRCm39) S343P probably benign Het
Ror1 A G 4: 100,265,107 (GRCm39) M194V probably damaging Het
Rsu1 T C 2: 13,174,815 (GRCm39) Y225C probably damaging Het
Rundc1 A G 11: 101,324,752 (GRCm39) N486S probably damaging Het
Sema6d T A 2: 124,496,151 (GRCm39) I65N probably damaging Het
Slc5a11 A G 7: 122,857,601 (GRCm39) E230G probably benign Het
Spint1 T C 2: 119,076,941 (GRCm39) S342P probably damaging Het
Stard3nl A G 13: 19,551,923 (GRCm39) S214P probably damaging Het
Tcp10a A C 17: 7,604,323 (GRCm39) T271P probably damaging Het
Tie1 A G 4: 118,329,831 (GRCm39) Y1091H probably benign Het
Tlr12 T C 4: 128,511,125 (GRCm39) Y375C probably benign Het
Tmem107 T A 11: 68,962,274 (GRCm39) M77K probably damaging Het
Tns2 C T 15: 102,017,369 (GRCm39) R281C probably damaging Het
Tns3 T C 11: 8,481,747 (GRCm39) K202E probably damaging Het
Tspoap1 C T 11: 87,670,347 (GRCm39) P1634L probably damaging Het
Ttc7b G A 12: 100,466,376 (GRCm39) R79C probably damaging Het
Ush2a A G 1: 188,643,844 (GRCm39) N4402S probably benign Het
Vmn2r13 A T 5: 109,304,322 (GRCm39) I703N probably damaging Het
Xrcc4 A G 13: 90,210,126 (GRCm39) probably null Het
Zp3 A T 5: 136,013,089 (GRCm39) K168* probably null Het
Other mutations in Prmt7
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01080:Prmt7 APN 8 106,963,846 (GRCm39) splice site probably benign
IGL01565:Prmt7 APN 8 106,977,041 (GRCm39) missense probably damaging 0.97
IGL02245:Prmt7 APN 8 106,963,937 (GRCm39) missense probably benign 0.10
R0104:Prmt7 UTSW 8 106,963,982 (GRCm39) missense probably damaging 0.99
R0255:Prmt7 UTSW 8 106,953,839 (GRCm39) splice site probably benign
R1432:Prmt7 UTSW 8 106,963,916 (GRCm39) nonsense probably null
R1551:Prmt7 UTSW 8 106,964,014 (GRCm39) missense probably benign
R1848:Prmt7 UTSW 8 106,963,640 (GRCm39) missense probably benign
R2117:Prmt7 UTSW 8 106,953,930 (GRCm39) missense probably damaging 0.96
R3784:Prmt7 UTSW 8 106,968,768 (GRCm39) missense probably benign 0.01
R4940:Prmt7 UTSW 8 106,963,910 (GRCm39) missense probably benign 0.01
R4983:Prmt7 UTSW 8 106,976,995 (GRCm39) missense probably damaging 1.00
R5285:Prmt7 UTSW 8 106,974,991 (GRCm39) missense probably benign 0.15
R6015:Prmt7 UTSW 8 106,961,640 (GRCm39) intron probably benign
R6520:Prmt7 UTSW 8 106,961,516 (GRCm39) missense probably damaging 1.00
R7097:Prmt7 UTSW 8 106,961,732 (GRCm39) missense unknown
R7122:Prmt7 UTSW 8 106,961,732 (GRCm39) missense unknown
R7233:Prmt7 UTSW 8 106,946,642 (GRCm39) missense probably damaging 0.99
R7538:Prmt7 UTSW 8 106,964,018 (GRCm39) missense probably benign 0.02
R7577:Prmt7 UTSW 8 106,968,835 (GRCm39) missense probably damaging 1.00
R7659:Prmt7 UTSW 8 106,963,918 (GRCm39) missense probably benign 0.00
R7858:Prmt7 UTSW 8 106,971,320 (GRCm39) missense possibly damaging 0.47
R8991:Prmt7 UTSW 8 106,943,874 (GRCm39) critical splice acceptor site probably null
R9041:Prmt7 UTSW 8 106,963,460 (GRCm39) missense possibly damaging 0.87
R9188:Prmt7 UTSW 8 106,961,486 (GRCm39) missense probably damaging 1.00
R9338:Prmt7 UTSW 8 106,961,665 (GRCm39) missense unknown
R9406:Prmt7 UTSW 8 106,970,435 (GRCm39) missense probably damaging 1.00
R9517:Prmt7 UTSW 8 106,953,930 (GRCm39) missense probably damaging 0.96
Predicted Primers PCR Primer
(F):5'- GAGAAATTGGCTCTTGTGACCAG -3'
(R):5'- AGAGTCTCCAGGCTGTTTGTC -3'

Sequencing Primer
(F):5'- TCTTGTGACCAGGAGCCCAG -3'
(R):5'- AGGCTGTTTGTCCTTCACAATTG -3'
Posted On 2015-09-25