Mutagenetix > Incidental Mutation

Incidental Mutation 'R4633:Zfp410'

349371

Institutional Source

Beutler Lab

Gene Symbol

Zfp410

Ensembl Gene

ENSMUSG00000042472

Gene Name

zinc finger protein 410

Synonyms

D12Ertd748e

MMRRC Submission

041898-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.197) question?

Stock #

R4633 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

84363626-84390497 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 84372510 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 112 (D112V)

Ref Sequence

ENSEMBL: ENSMUSP00000152441 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000045931] [ENSMUST00000220931] [ENSMUST00000221656] [ENSMUST00000222258] [ENSMUST00000222832] [ENSMUST00000222606] [ENSMUST00000222471]

AlphaFold

Q8BKX7

Predicted Effect

probably damaging
Transcript: ENSMUST00000045931
AA Change: D112V

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000045550
Gene: ENSMUSG00000042472
AA Change: D112V

Domain	Start	End	E-Value	Type
ZnF_C2H2	219	243	1.04e-3	SMART
ZnF_C2H2	249	273	6.88e-4	SMART
ZnF_C2H2	279	303	1.13e-4	SMART
ZnF_C2H2	309	333	1.45e-2	SMART
ZnF_C2H2	339	361	5.59e-4	SMART
low complexity region	400	417	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000220931
AA Change: D112V

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000220955

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000221490

Predicted Effect

probably damaging
Transcript: ENSMUST00000221656
AA Change: D112V

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

probably damaging
Transcript: ENSMUST00000222258
AA Change: D112V

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000222431

Predicted Effect

probably damaging
Transcript: ENSMUST00000222832
AA Change: D59V

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

Predicted Effect

probably benign
Transcript: ENSMUST00000222606

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000222773

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000223355

Predicted Effect

probably benign
Transcript: ENSMUST00000222471

Meta Mutation Damage Score

0.2629

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 97.1%
20x: 94.9%

Validation Efficiency

95% (73/77)

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca3	T	A	17: 24,606,503 (GRCm39)	L786Q	probably null	Het
Abcb6	A	T	1: 75,154,426 (GRCm39)		probably benign	Het
Alg10b	T	C	15: 90,112,497 (GRCm39)	V447A	probably benign	Het
Alkbh2	C	T	5: 114,262,287 (GRCm39)	E148K	probably damaging	Het
B4galt7	A	G	13: 55,756,563 (GRCm39)	H203R	probably damaging	Het
Cd44	T	G	2: 102,683,392 (GRCm39)	D214A	possibly damaging	Het
Ces1c	T	C	8: 93,845,014 (GRCm39)	D275G	probably benign	Het
Cnot11	G	T	1: 39,575,299 (GRCm39)	W127L	probably benign	Het
Csmd1	A	G	8: 16,052,620 (GRCm39)	I2168T	probably damaging	Het
Cyp3a59	T	C	5: 146,031,248 (GRCm39)	F137S	probably damaging	Het
Dst	T	A	1: 34,209,515 (GRCm39)	L1234Q	probably damaging	Het
Erbb2	T	A	11: 98,323,814 (GRCm39)	I676N	possibly damaging	Het
Erlin1	G	A	19: 44,029,204 (GRCm39)	R243C	probably damaging	Het
Fanci	T	C	7: 79,076,990 (GRCm39)	L576P	probably damaging	Het
Fzd1	A	T	5: 4,805,865 (GRCm39)	Y572*	probably null	Het
Glg1	C	T	8: 111,904,276 (GRCm39)		probably null	Het
Gpr139	A	T	7: 118,743,628 (GRCm39)	I319N	probably damaging	Het
Hectd4	C	A	5: 121,487,279 (GRCm39)	H3425N	probably benign	Het
Itga10	A	G	3: 96,555,020 (GRCm39)	D118G	possibly damaging	Het
Klra13-ps	T	G	6: 130,268,136 (GRCm39)		noncoding transcript	Het
Krt1	C	T	15: 101,754,622 (GRCm39)	G543S	unknown	Het
Krt5	T	A	15: 101,620,042 (GRCm39)	D225V	probably damaging	Het
Krtap4-9	G	T	11: 99,676,380 (GRCm39)		probably benign	Het
Lama1	C	A	17: 68,105,579 (GRCm39)	A2029E	probably damaging	Het
Lrp2	T	A	2: 69,291,761 (GRCm39)	T3473S	probably benign	Het
Lrrc37	A	T	11: 103,509,957 (GRCm39)		probably benign	Het
Lrriq1	G	A	10: 103,036,424 (GRCm39)	R910*	probably null	Het
Map1b	C	T	13: 99,571,450 (GRCm39)	V424M	probably damaging	Het
Mrtfb	T	C	16: 13,197,737 (GRCm39)	I85T	possibly damaging	Het
Mylk2	T	C	2: 152,759,335 (GRCm39)	S369P	probably benign	Het
Myom3	T	G	4: 135,503,010 (GRCm39)	F362L	probably benign	Het
Nomo1	A	G	7: 45,699,684 (GRCm39)		probably benign	Het
Or10s1	T	A	9: 39,985,630 (GRCm39)	V13E	probably damaging	Het
Or1p1	T	G	11: 74,180,120 (GRCm39)	M216R	probably benign	Het
Or2l13b	C	T	16: 19,349,034 (GRCm39)	G212D	possibly damaging	Het
Or2w4	A	G	13: 21,795,398 (GRCm39)	V247A	probably damaging	Het
Parp4	C	T	14: 56,885,048 (GRCm39)	L1376F	unknown	Het
Phykpl	C	A	11: 51,484,435 (GRCm39)	A208E	probably damaging	Het
Pla2g15	T	C	8: 106,886,887 (GRCm39)	F126S	probably damaging	Het
Polq	T	G	16: 36,868,904 (GRCm39)	M479R	probably damaging	Het
Prpf4b	A	G	13: 35,084,425 (GRCm39)	T938A	probably damaging	Het
Psma1	A	G	7: 113,870,369 (GRCm39)	M63T	probably damaging	Het
Rbpms2	T	C	9: 65,558,918 (GRCm39)	S174P	probably benign	Het
Rcc1	G	T	4: 132,063,080 (GRCm39)	S162R	probably damaging	Het
Rev3l	T	G	10: 39,722,182 (GRCm39)	L2520R	probably damaging	Het
Rhobtb1	T	A	10: 69,085,443 (GRCm39)		probably null	Het
Rps19	G	T	7: 24,588,595 (GRCm39)		probably benign	Het
Rsf1	GCG	GCGACGGCGACG	7: 97,229,114 (GRCm39)		probably benign	Het
Selenof	C	T	3: 144,302,622 (GRCm39)	R116*	probably null	Het
Slc16a11	T	C	11: 70,107,205 (GRCm39)		probably null	Het
Stk3	A	G	15: 34,959,074 (GRCm39)	V296A	probably damaging	Het
Taar8b	C	A	10: 23,968,150 (GRCm39)	E15*	probably null	Het
Tas2r102	T	A	6: 132,739,642 (GRCm39)	N183K	possibly damaging	Het
Tet2	T	A	3: 133,191,310 (GRCm39)	E1041D	probably benign	Het
Tm9sf1	A	G	14: 55,878,660 (GRCm39)	V244A	probably damaging	Het
Trgc4	G	T	13: 19,536,457 (GRCm39)	V172F	probably benign	Het
Trim24	T	A	6: 37,933,371 (GRCm39)	I650K	probably damaging	Het
Trim59	G	T	3: 68,944,747 (GRCm39)	Q198K	probably benign	Het
Ttc28	C	T	5: 111,371,867 (GRCm39)	T772I	probably damaging	Het
Tvp23a	C	T	16: 10,244,909 (GRCm39)	V146M	probably benign	Het
Usp17la	A	T	7: 104,509,428 (GRCm39)	D11V	possibly damaging	Het
Usp48	A	G	4: 137,362,211 (GRCm39)	K32R	probably damaging	Het
Uspl1	A	G	5: 149,151,202 (GRCm39)	K801E	probably damaging	Het
Utp20	T	C	10: 88,588,814 (GRCm39)	I2452V	probably benign	Het
Vps18	T	C	2: 119,123,757 (GRCm39)	L228P	probably damaging	Het
Yju2b	T	C	8: 84,987,024 (GRCm39)	T158A	probably benign	Het
Zfp872	G	T	9: 22,108,490 (GRCm39)		probably null	Het
Zswim8	A	G	14: 20,768,891 (GRCm39)	E1110G	probably damaging	Het

Other mutations in Zfp410

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01782:Zfp410	APN	12	84,374,048 (GRCm39)	splice site	probably benign
IGL01871:Zfp410	APN	12	84,372,565 (GRCm39)	critical splice donor site	probably null
IGL02152:Zfp410	APN	12	84,379,702 (GRCm39)	unclassified	probably benign
IGL02702:Zfp410	APN	12	84,372,550 (GRCm39)	missense	probably damaging	1.00
IGL02902:Zfp410	APN	12	84,378,594 (GRCm39)	splice site	probably null
R0453:Zfp410	UTSW	12	84,378,486 (GRCm39)	missense	probably damaging	0.99
R1525:Zfp410	UTSW	12	84,369,740 (GRCm39)	missense	probably damaging	1.00
R1569:Zfp410	UTSW	12	84,379,726 (GRCm39)	missense	probably damaging	1.00
R1694:Zfp410	UTSW	12	84,372,494 (GRCm39)	missense	probably benign
R2263:Zfp410	UTSW	12	84,369,794 (GRCm39)	critical splice donor site	probably null
R2878:Zfp410	UTSW	12	84,378,411 (GRCm39)	missense	probably damaging	1.00
R3941:Zfp410	UTSW	12	84,385,527 (GRCm39)	missense	probably damaging	1.00
R4155:Zfp410	UTSW	12	84,374,206 (GRCm39)	missense	probably damaging	1.00
R4156:Zfp410	UTSW	12	84,374,206 (GRCm39)	missense	probably damaging	1.00
R4157:Zfp410	UTSW	12	84,374,206 (GRCm39)	missense	probably damaging	1.00
R4630:Zfp410	UTSW	12	84,372,510 (GRCm39)	missense	probably damaging	1.00
R4632:Zfp410	UTSW	12	84,372,510 (GRCm39)	missense	probably damaging	1.00
R4880:Zfp410	UTSW	12	84,384,449 (GRCm39)	missense	probably damaging	0.97
R4969:Zfp410	UTSW	12	84,378,582 (GRCm39)	missense	possibly damaging	0.89
R5893:Zfp410	UTSW	12	84,384,385 (GRCm39)	splice site	probably null
R5981:Zfp410	UTSW	12	84,378,414 (GRCm39)	missense	probably benign	0.17
R6268:Zfp410	UTSW	12	84,378,612 (GRCm39)	missense	probably benign	0.02
R7318:Zfp410	UTSW	12	84,372,464 (GRCm39)	missense	probably benign	0.00
R7599:Zfp410	UTSW	12	84,378,630 (GRCm39)	missense	probably benign	0.00
R8357:Zfp410	UTSW	12	84,374,086 (GRCm39)	missense	possibly damaging	0.94
R8457:Zfp410	UTSW	12	84,374,086 (GRCm39)	missense	possibly damaging	0.94

Predicted Primers

PCR Primer
(F):5'- GTGAGTGCCACATAGAGCTATG -3'
(R):5'- GCAGAGTTATCGTAGAGCCTTTG -3'

Sequencing Primer
(F):5'- GCCACATAGAGCTATGGTGTTTTTCC -3'
(R):5'- GAGTTATCGTAGAGCCTTTGTCCTTC -3'

Posted On

2015-10-08