Incidental Mutation 'R4635:Or10ag2'
| ID |
349426 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or10ag2
|
| Ensembl Gene |
ENSMUSG00000043274 |
| Gene Name |
olfactory receptor family 10 subfamily AG member 2 |
| Synonyms |
Olfr1123, MOR264-17, GA_x6K02T2Q125-48917235-48918206 |
| MMRRC Submission |
041899-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.244)
|
| Stock # |
R4635 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
87248394-87249365 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 87249043 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Methionine to Lysine
at position 217
(M217K)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000058786
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000054974]
[ENSMUST00000216208]
|
| AlphaFold |
A2AT85 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000054974
AA Change: M217K
PolyPhen 2
Score 0.046 (Sensitivity: 0.94; Specificity: 0.83)
|
| SMART Domains |
Protein: ENSMUSP00000058786
Gene: ENSMUSG00000043274
AA Change: M217K
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
44 |
321 |
4.4e-52 |
PFAM |
|
Pfam:7tm_1
|
54 |
303 |
2.6e-21 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000213950
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000214663
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000216208
AA Change: M215K
PolyPhen 2
Score 0.037 (Sensitivity: 0.94; Specificity: 0.82)
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.2%
- 20x: 95.1%
|
| Validation Efficiency |
98% (39/40) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 35 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcb1a |
A |
T |
5: 8,764,927 (GRCm39) |
K639I |
probably benign |
Het |
| Amer3 |
C |
A |
1: 34,626,958 (GRCm39) |
T399K |
probably damaging |
Het |
| Arfgef3 |
T |
C |
10: 18,510,603 (GRCm39) |
Y786C |
probably damaging |
Het |
| Arhgef26 |
A |
G |
3: 62,247,861 (GRCm39) |
Y315C |
probably damaging |
Het |
| Ccdc121 |
G |
A |
5: 31,645,435 (GRCm39) |
R396Q |
probably benign |
Het |
| Chchd6 |
T |
C |
6: 89,444,448 (GRCm39) |
E178G |
probably damaging |
Het |
| Chd3 |
TGCTGCCGCTGCCGC |
TGCTGCCGCTGCCGCTGCCGC |
11: 69,253,013 (GRCm39) |
|
probably benign |
Het |
| Daam1 |
T |
A |
12: 72,005,518 (GRCm39) |
|
probably null |
Het |
| Ddx60 |
A |
G |
8: 62,490,101 (GRCm39) |
E1690G |
probably benign |
Het |
| Eme2 |
G |
T |
17: 25,113,882 (GRCm39) |
P48T |
probably benign |
Het |
| Ferd3l |
T |
C |
12: 33,978,835 (GRCm39) |
M116T |
probably damaging |
Het |
| Gm13141 |
GGTTTCTTGATGCCA |
G |
4: 147,612,561 (GRCm39) |
|
noncoding transcript |
Het |
| Gtf2i |
T |
C |
5: 134,274,028 (GRCm39) |
N727D |
probably damaging |
Het |
| Hao1 |
T |
A |
2: 134,365,072 (GRCm39) |
N185I |
probably damaging |
Het |
| Kifap3 |
C |
T |
1: 163,642,004 (GRCm39) |
T195I |
probably damaging |
Het |
| Mag |
A |
G |
7: 30,606,348 (GRCm39) |
F363S |
probably damaging |
Het |
| Mef2a |
A |
G |
7: 66,890,175 (GRCm39) |
I135T |
possibly damaging |
Het |
| Muc4 |
T |
C |
16: 32,753,802 (GRCm38) |
I1226T |
probably benign |
Het |
| Nphs1 |
T |
C |
7: 30,167,432 (GRCm39) |
F787L |
probably benign |
Het |
| Nr1h2 |
A |
C |
7: 44,201,961 (GRCm39) |
S42A |
probably benign |
Het |
| Odad4 |
C |
T |
11: 100,442,333 (GRCm39) |
Q164* |
probably null |
Het |
| Or4a76 |
A |
C |
2: 89,460,516 (GRCm39) |
I242S |
possibly damaging |
Het |
| Or51aa2 |
T |
C |
7: 103,188,355 (GRCm39) |
I29V |
probably benign |
Het |
| Or5ak23 |
T |
A |
2: 85,245,208 (GRCm39) |
N5I |
probably damaging |
Het |
| Rab38 |
T |
C |
7: 88,099,854 (GRCm39) |
V123A |
probably damaging |
Het |
| Scd1 |
T |
C |
19: 44,395,024 (GRCm39) |
Y67C |
probably damaging |
Het |
| Scn5a |
T |
C |
9: 119,358,051 (GRCm39) |
N730S |
possibly damaging |
Het |
| Shc2 |
C |
T |
10: 79,462,120 (GRCm39) |
C341Y |
probably benign |
Het |
| Tfdp2 |
T |
A |
9: 96,179,727 (GRCm39) |
N113K |
probably damaging |
Het |
| Tmc3 |
A |
G |
7: 83,234,290 (GRCm39) |
|
probably benign |
Het |
| Top6bl |
A |
G |
19: 4,748,524 (GRCm39) |
|
probably benign |
Het |
| Tox |
A |
T |
4: 6,990,501 (GRCm39) |
|
probably benign |
Het |
| Tspoap1 |
A |
G |
11: 87,668,683 (GRCm39) |
K1319E |
probably benign |
Het |
| Vit |
G |
A |
17: 78,881,641 (GRCm39) |
V135I |
probably benign |
Het |
| Vwa5b1 |
T |
G |
4: 138,338,150 (GRCm39) |
S71R |
possibly damaging |
Het |
|
| Other mutations in Or10ag2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00231:Or10ag2
|
APN |
2 |
87,248,910 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
IGL01067:Or10ag2
|
APN |
2 |
87,248,714 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01526:Or10ag2
|
APN |
2 |
87,249,319 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01580:Or10ag2
|
APN |
2 |
87,248,880 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL01986:Or10ag2
|
APN |
2 |
87,248,880 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02503:Or10ag2
|
APN |
2 |
87,248,636 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL02527:Or10ag2
|
APN |
2 |
87,249,181 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02731:Or10ag2
|
APN |
2 |
87,249,051 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03215:Or10ag2
|
APN |
2 |
87,248,412 (GRCm39) |
missense |
probably benign |
0.05 |
|
IGL03366:Or10ag2
|
APN |
2 |
87,248,587 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R0645:Or10ag2
|
UTSW |
2 |
87,248,612 (GRCm39) |
nonsense |
probably null |
|
|
R1857:Or10ag2
|
UTSW |
2 |
87,248,992 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2175:Or10ag2
|
UTSW |
2 |
87,248,500 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3691:Or10ag2
|
UTSW |
2 |
87,248,514 (GRCm39) |
missense |
probably benign |
0.20 |
|
R4082:Or10ag2
|
UTSW |
2 |
87,248,801 (GRCm39) |
nonsense |
probably null |
|
|
R4877:Or10ag2
|
UTSW |
2 |
87,248,907 (GRCm39) |
nonsense |
probably null |
|
|
R5190:Or10ag2
|
UTSW |
2 |
87,249,187 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5253:Or10ag2
|
UTSW |
2 |
87,249,012 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
R6266:Or10ag2
|
UTSW |
2 |
87,249,350 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6784:Or10ag2
|
UTSW |
2 |
87,248,796 (GRCm39) |
missense |
probably benign |
0.20 |
|
R6909:Or10ag2
|
UTSW |
2 |
87,248,959 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7255:Or10ag2
|
UTSW |
2 |
87,249,286 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8076:Or10ag2
|
UTSW |
2 |
87,248,889 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8116:Or10ag2
|
UTSW |
2 |
87,249,081 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8315:Or10ag2
|
UTSW |
2 |
87,248,995 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8888:Or10ag2
|
UTSW |
2 |
87,248,659 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8895:Or10ag2
|
UTSW |
2 |
87,248,659 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- GCCTATGACCGTTATGTGGC -3'
(R):5'- GGTTGTAAGTATGTGATACCAGCTG -3'
Sequencing Primer
(F):5'- CCACAGGATCTGTACACAGTTAGTGG -3'
(R):5'- TGTGATACCAGCTGTTCCATAG -3'
|
| Posted On |
2015-10-08 |
Incidental Mutation