Mutagenetix > Incidental Mutation

Incidental Mutation 'R0267:Alox15'

35013

Institutional Source

Beutler Lab

Gene Symbol

Alox15

Ensembl Gene

ENSMUSG00000018924

Gene Name

arachidonate 15-lipoxygenase

Synonyms

L-12LO, Alox12l, 12-LO

MMRRC Submission

038493-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R0267 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

70344152-70352031 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 70346153 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 393 (H393L)

Ref Sequence

ENSEMBL: ENSMUSP00000019068 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000019068]

AlphaFold

P39654

Predicted Effect

probably damaging
Transcript: ENSMUST00000019068
AA Change: H393L

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000019068
Gene: ENSMUSG00000018924
AA Change: H393L

Domain	Start	End	E-Value	Type
LH2	2	112	2.18e-37	SMART
low complexity region	124	141	N/A	INTRINSIC
Pfam:Lipoxygenase	156	649	1.8e-63	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000130000

Meta Mutation Damage Score

0.5347

Coding Region Coverage

1x: 98.6%
3x: 97.7%
10x: 96.2%
20x: 94.0%

Validation Efficiency

97% (64/66)

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele show altered arachidonic acid metabolism and develop a myeloproliferative disorder associated with splenomegaly, abnormal splenic architecture, leukocystosis, basophilia, abnormal lymph node morphology, dermatitis, and premature death likely due to anemia. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca1	A	G	4: 53,046,105 (GRCm38)	F1721S	probably damaging	Het
Adgrb1	G	A	15: 74,529,389 (GRCm38)	R78H	probably damaging	Het
Adgrd1	G	A	5: 129,139,594 (GRCm38)	A342T	probably benign	Het
Adrb1	A	T	19: 56,723,491 (GRCm38)	K374*	probably null	Het
Aldh18a1	C	A	19: 40,573,789 (GRCm38)	V264F	probably benign	Het
Aldh1l2	C	T	10: 83,522,687 (GRCm38)		probably benign	Het
Aox2	A	G	1: 58,339,446 (GRCm38)		probably benign	Het
Appbp2	T	C	11: 85,201,462 (GRCm38)	Y297C	probably damaging	Het
Atxn2l	T	G	7: 126,493,207 (GRCm38)	Q950P	probably damaging	Het
Bicd1	A	T	6: 149,517,042 (GRCm38)	D737V	probably damaging	Het
C9	T	C	15: 6,467,458 (GRCm38)	I212T	probably benign	Het
Ccdc63	A	T	5: 122,117,044 (GRCm38)		probably benign	Het
Chst1	C	A	2: 92,613,606 (GRCm38)	P141Q	probably damaging	Het
Cped1	T	A	6: 22,119,476 (GRCm38)	F311L	probably damaging	Het
D6Wsu163e	T	A	6: 126,946,491 (GRCm38)	H113Q	probably benign	Het
Dcn	A	T	10: 97,506,483 (GRCm38)		probably benign	Het
Dmbx1	C	T	4: 115,918,112 (GRCm38)	A324T	probably benign	Het
Dock10	G	T	1: 80,512,454 (GRCm38)	Q1618K	probably damaging	Het
Dpyd	A	G	3: 118,917,272 (GRCm38)	E443G	probably benign	Het
Espl1	T	C	15: 102,313,017 (GRCm38)	V953A	possibly damaging	Het
Exosc10	T	C	4: 148,562,756 (GRCm38)	L174P	probably damaging	Het
Foxg1	A	G	12: 49,385,582 (GRCm38)	Y366C	probably damaging	Het
Fxyd3	T	C	7: 31,070,734 (GRCm38)		probably benign	Het
Gbp2	T	C	3: 142,630,106 (GRCm38)	V189A	probably benign	Het
Gins4	T	C	8: 23,229,410 (GRCm38)		probably benign	Het
Gm12789	A	G	4: 101,988,122 (GRCm38)	T3A	probably benign	Het
Gnb1l	T	C	16: 18,548,089 (GRCm38)		probably benign	Het
Gtpbp3	T	C	8: 71,491,497 (GRCm38)	L295S	probably damaging	Het
Hrh4	C	A	18: 13,022,398 (GRCm38)	Y331*	probably null	Het
Hsd11b1	A	T	1: 193,241,397 (GRCm38)	Y52N	probably damaging	Het
Jam3	A	G	9: 27,106,405 (GRCm38)	I29T	probably benign	Het
Kctd16	T	A	18: 40,530,877 (GRCm38)	I353N	probably benign	Het
Lama4	G	T	10: 39,028,639 (GRCm38)	G246C	probably damaging	Het
Lhx3	T	A	2: 26,203,028 (GRCm38)	M137L	probably benign	Het
Morc2a	T	C	11: 3,678,567 (GRCm38)	I340T	probably benign	Het
Myo7a	A	C	7: 98,054,624 (GRCm38)	I1969S	probably benign	Het
Olfr1471	T	A	19: 13,445,428 (GRCm38)	C139S	probably damaging	Het
Olfr304	T	C	7: 86,386,267 (GRCm38)	E131G	possibly damaging	Het
Olfr429	A	G	1: 174,089,166 (GRCm38)	N42S	probably damaging	Het
Pclo	T	C	5: 14,681,180 (GRCm38)	L3232P	unknown	Het
Polr1a	T	G	6: 71,974,139 (GRCm38)	I1407M	probably damaging	Het
Ppip5k2	A	G	1: 97,728,997 (GRCm38)	V817A	probably damaging	Het
Rbfox3	T	C	11: 118,495,240 (GRCm38)	T280A	probably benign	Het
Rfx3	T	C	19: 27,793,788 (GRCm38)	D521G	probably benign	Het
Scn5a	C	T	9: 119,543,135 (GRCm38)	V223I	probably damaging	Het
Sgsm3	T	G	15: 81,006,602 (GRCm38)	M119R	probably damaging	Het
Slc6a7	T	A	18: 60,996,711 (GRCm38)	M608L	probably benign	Het
Slit2	A	G	5: 48,182,331 (GRCm38)		probably benign	Het
Steap2	T	A	5: 5,673,561 (GRCm38)	I440F	probably benign	Het
Syn2	T	G	6: 115,254,150 (GRCm38)		probably benign	Het
Taar2	G	A	10: 23,941,495 (GRCm38)	R311H	probably benign	Het
Tfb2m	G	A	1: 179,533,638 (GRCm38)	H262Y	probably benign	Het
Trmt1l	A	G	1: 151,457,675 (GRCm38)		probably benign	Het
Trpm6	C	A	19: 18,823,378 (GRCm38)	P819T	probably benign	Het
Ttn	G	A	2: 76,743,689 (GRCm38)	A25620V	probably damaging	Het
Ubn2	T	C	6: 38,482,618 (GRCm38)		probably null	Het
Vars	T	C	17: 35,011,596 (GRCm38)		probably benign	Het
Vip	A	T	10: 5,644,004 (GRCm38)	D119V	possibly damaging	Het
Vmn2r92	C	T	17: 18,167,957 (GRCm38)	A408V	probably damaging	Het
Vps33b	T	C	7: 80,286,054 (GRCm38)	I405T	possibly damaging	Het
Zbtb21	T	A	16: 97,952,100 (GRCm38)	S356C	probably damaging	Het
Zdhhc6	A	T	19: 55,308,930 (GRCm38)	S237T	probably benign	Het
Zfp142	G	A	1: 74,576,064 (GRCm38)	A427V	probably benign	Het
Zfp692	T	A	11: 58,314,314 (GRCm38)	V463E	possibly damaging	Het
Zmynd8	A	T	2: 165,828,402 (GRCm38)	I384N	probably damaging	Het

Other mutations in Alox15

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01364:Alox15	APN	11	70,345,166 (GRCm38)	missense	possibly damaging	0.95
IGL02231:Alox15	APN	11	70,349,556 (GRCm38)	missense	probably benign
IGL02403:Alox15	APN	11	70,345,901 (GRCm38)	missense	probably damaging	0.96
IGL03377:Alox15	APN	11	70,349,662 (GRCm38)	missense	probably damaging	1.00
R0011:Alox15	UTSW	11	70,349,596 (GRCm38)	missense	possibly damaging	0.66
R0013:Alox15	UTSW	11	70,349,635 (GRCm38)	missense	possibly damaging	0.95
R0646:Alox15	UTSW	11	70,345,624 (GRCm38)	nonsense	probably null
R0726:Alox15	UTSW	11	70,350,195 (GRCm38)	missense	probably damaging	1.00
R1553:Alox15	UTSW	11	70,349,632 (GRCm38)	missense	possibly damaging	0.46
R1687:Alox15	UTSW	11	70,349,918 (GRCm38)	missense	probably benign	0.10
R1848:Alox15	UTSW	11	70,350,752 (GRCm38)	missense	probably damaging	0.99
R1974:Alox15	UTSW	11	70,349,973 (GRCm38)	missense	probably benign	0.06
R3113:Alox15	UTSW	11	70,344,877 (GRCm38)	missense	probably benign	0.20
R4551:Alox15	UTSW	11	70,344,596 (GRCm38)	missense	probably benign
R5511:Alox15	UTSW	11	70,349,982 (GRCm38)	missense	probably benign	0.00
R5809:Alox15	UTSW	11	70,350,882 (GRCm38)	missense	probably damaging	1.00
R6479:Alox15	UTSW	11	70,345,185 (GRCm38)	missense	probably damaging	0.98
R6800:Alox15	UTSW	11	70,344,819 (GRCm38)	critical splice donor site	probably null
R7243:Alox15	UTSW	11	70,350,714 (GRCm38)	missense	probably null	1.00
R7253:Alox15	UTSW	11	70,345,898 (GRCm38)	missense	probably damaging	1.00
R7644:Alox15	UTSW	11	70,345,542 (GRCm38)	missense	probably null	1.00
R7712:Alox15	UTSW	11	70,350,253 (GRCm38)	critical splice acceptor site	probably null
R7823:Alox15	UTSW	11	70,344,668 (GRCm38)	missense	possibly damaging	0.86
R8192:Alox15	UTSW	11	70,350,910 (GRCm38)	missense	probably benign	0.38
R8410:Alox15	UTSW	11	70,344,927 (GRCm38)	missense	probably benign	0.25
R8765:Alox15	UTSW	11	70,349,993 (GRCm38)	missense	probably benign	0.00
R9256:Alox15	UTSW	11	70,345,544 (GRCm38)	missense	possibly damaging	0.49
R9361:Alox15	UTSW	11	70,350,853 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCTCCAGCTTGCTTGAGAAGATCC -3'
(R):5'- GTGATTTGACTCTTGTGGCCCCAG -3'

Sequencing Primer
(F):5'- AGAAGATCCAGGTGGCCTC -3'
(R):5'- TTGTGGCCCCAGTCAGG -3'

Posted On

2013-05-09