Incidental Mutation 'R4649:Cspg4'
ID |
350603 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cspg4
|
Ensembl Gene |
ENSMUSG00000032911 |
Gene Name |
chondroitin sulfate proteoglycan 4 |
Synonyms |
Cspg4a, AN2, NG2, 4732461B14Rik |
MMRRC Submission |
041910-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R4649 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
9 |
Chromosomal Location |
56772388-56807154 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 56794149 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Aspartic acid
at position 628
(V628D)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000038909
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000035661]
|
AlphaFold |
Q8VHY0 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000035661
AA Change: V628D
PolyPhen 2
Score 0.930 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000038909 Gene: ENSMUSG00000032911 AA Change: V628D
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
29 |
N/A |
INTRINSIC |
LamG
|
47 |
179 |
9.16e-22 |
SMART |
LamG
|
223 |
364 |
3.52e-23 |
SMART |
low complexity region
|
384 |
397 |
N/A |
INTRINSIC |
Pfam:Cadherin_3
|
495 |
646 |
1e-36 |
PFAM |
Pfam:Cadherin_3
|
732 |
885 |
7.9e-14 |
PFAM |
Pfam:Cadherin_3
|
868 |
996 |
7e-15 |
PFAM |
Pfam:Cadherin_3
|
972 |
1115 |
9e-26 |
PFAM |
Pfam:Cadherin_3
|
1116 |
1223 |
1.1e-10 |
PFAM |
Pfam:Cadherin_3
|
1225 |
1344 |
3.3e-12 |
PFAM |
Pfam:Cadherin_3
|
1425 |
1568 |
6.3e-52 |
PFAM |
Pfam:Cadherin_3
|
1578 |
1684 |
9.7e-9 |
PFAM |
Pfam:Cadherin_3
|
1674 |
1809 |
3.2e-9 |
PFAM |
Pfam:Cadherin_3
|
1779 |
1929 |
1.6e-31 |
PFAM |
transmembrane domain
|
2229 |
2251 |
N/A |
INTRINSIC |
low complexity region
|
2295 |
2305 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000214057
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215666
|
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.4%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] A human melanoma-associated chondroitin sulfate proteoglycan plays a role in stabilizing cell-substratum interactions during early events of melanoma cell spreading on endothelial basement membranes. CSPG4 represents an integral membrane chondroitin sulfate proteoglycan expressed by human malignant melanoma cells. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a null mutation display abnormal dentate gyrus morphology and abnormal smooth muscle cell physiology. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 106 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2700049A03Rik |
G |
T |
12: 71,211,320 (GRCm39) |
E685* |
probably null |
Het |
2700049A03Rik |
A |
T |
12: 71,211,321 (GRCm39) |
E685V |
possibly damaging |
Het |
4933409G03Rik |
G |
A |
2: 68,436,559 (GRCm39) |
E168K |
unknown |
Het |
Abca4 |
G |
T |
3: 121,963,542 (GRCm39) |
V841F |
probably damaging |
Het |
Adcy10 |
G |
A |
1: 165,331,618 (GRCm39) |
E84K |
probably damaging |
Het |
Adgrg6 |
C |
A |
10: 14,344,571 (GRCm39) |
M127I |
probably damaging |
Het |
Agpat5 |
A |
G |
8: 18,929,668 (GRCm39) |
I266V |
possibly damaging |
Het |
Agtpbp1 |
A |
T |
13: 59,676,213 (GRCm39) |
Y186N |
possibly damaging |
Het |
Alx1 |
A |
T |
10: 102,845,193 (GRCm39) |
N279K |
probably damaging |
Het |
Arsi |
G |
A |
18: 61,049,723 (GRCm39) |
G202E |
probably benign |
Het |
Arsi |
A |
G |
18: 61,050,170 (GRCm39) |
Y351C |
probably damaging |
Het |
B4galnt3 |
T |
A |
6: 120,201,581 (GRCm39) |
R155W |
probably damaging |
Het |
BC028528 |
T |
C |
3: 95,795,577 (GRCm39) |
E75G |
probably damaging |
Het |
Bmp2k |
C |
T |
5: 97,200,970 (GRCm39) |
P297S |
possibly damaging |
Het |
Btnl4 |
A |
G |
17: 34,691,602 (GRCm39) |
S296P |
probably benign |
Het |
Bzw2 |
A |
T |
12: 36,173,980 (GRCm39) |
V98E |
probably null |
Het |
Cacna1d |
C |
T |
14: 29,817,365 (GRCm39) |
M1232I |
probably benign |
Het |
Cast |
A |
G |
13: 74,894,133 (GRCm39) |
S171P |
probably benign |
Het |
Catsperb |
G |
A |
12: 101,507,771 (GRCm39) |
A513T |
probably benign |
Het |
Cd19 |
A |
G |
7: 126,013,664 (GRCm39) |
S42P |
probably benign |
Het |
Chml |
A |
G |
1: 175,514,962 (GRCm39) |
S138P |
probably benign |
Het |
Clic6 |
T |
G |
16: 92,327,827 (GRCm39) |
|
probably null |
Het |
Col12a1 |
A |
T |
9: 79,547,076 (GRCm39) |
V2252E |
probably damaging |
Het |
Cplx2 |
G |
A |
13: 54,527,361 (GRCm39) |
E82K |
probably benign |
Het |
Csmd2 |
G |
A |
4: 128,439,866 (GRCm39) |
V3107M |
probably benign |
Het |
Dcaf13 |
G |
A |
15: 39,001,637 (GRCm39) |
R315Q |
possibly damaging |
Het |
Deaf1 |
A |
G |
7: 140,877,486 (GRCm39) |
V547A |
possibly damaging |
Het |
Dmxl1 |
C |
T |
18: 50,011,698 (GRCm39) |
T1285I |
probably damaging |
Het |
Dnah3 |
C |
A |
7: 119,646,921 (GRCm39) |
W1036L |
probably damaging |
Het |
Dnai3 |
A |
G |
3: 145,753,922 (GRCm39) |
S713P |
probably damaging |
Het |
Dpy19l1 |
A |
C |
9: 24,393,350 (GRCm39) |
S140A |
possibly damaging |
Het |
Dsg2 |
T |
A |
18: 20,735,302 (GRCm39) |
D1093E |
possibly damaging |
Het |
Edaradd |
T |
A |
13: 12,523,304 (GRCm39) |
H12L |
probably damaging |
Het |
Enam |
T |
C |
5: 88,640,827 (GRCm39) |
M163T |
probably benign |
Het |
Fbxo22 |
T |
A |
9: 55,128,333 (GRCm39) |
V218E |
probably damaging |
Het |
Fbxo34 |
A |
T |
14: 47,767,085 (GRCm39) |
K148N |
probably damaging |
Het |
Foxi3 |
A |
G |
6: 70,933,960 (GRCm39) |
D149G |
probably damaging |
Het |
Gbp8 |
C |
T |
5: 105,189,807 (GRCm39) |
G75D |
probably damaging |
Het |
Gm10784 |
C |
T |
13: 50,099,251 (GRCm39) |
|
noncoding transcript |
Het |
Gm7247 |
G |
A |
14: 51,807,051 (GRCm39) |
|
probably null |
Het |
Grik3 |
T |
A |
4: 125,544,278 (GRCm39) |
V333E |
probably damaging |
Het |
Gsap |
A |
T |
5: 21,431,309 (GRCm39) |
D211V |
probably damaging |
Het |
H2-T15 |
T |
C |
17: 36,368,768 (GRCm39) |
Y104C |
possibly damaging |
Het |
Ino80 |
T |
C |
2: 119,261,489 (GRCm39) |
N725S |
probably damaging |
Het |
Itgad |
A |
G |
7: 127,788,703 (GRCm39) |
I443V |
probably benign |
Het |
Itsn1 |
T |
A |
16: 91,638,476 (GRCm39) |
I52N |
probably damaging |
Het |
Kmt2b |
TCTCCTCCTCCTCCTCCTCCTCCTCC |
TCTCCTCCTCCTCCTCCTCCTCC |
7: 30,285,783 (GRCm39) |
|
probably benign |
Het |
Lamc1 |
T |
G |
1: 153,104,523 (GRCm39) |
S59R |
probably damaging |
Het |
Lrrk1 |
T |
C |
7: 65,922,801 (GRCm39) |
I1366V |
probably benign |
Het |
Lyn |
C |
A |
4: 3,738,850 (GRCm39) |
Q41K |
probably benign |
Het |
Mapk13 |
C |
T |
17: 28,997,461 (GRCm39) |
R360* |
probably null |
Het |
Mapk8ip3 |
T |
A |
17: 25,123,726 (GRCm39) |
I599F |
probably damaging |
Het |
Me1 |
T |
C |
9: 86,561,905 (GRCm39) |
K60R |
probably benign |
Het |
Mga |
T |
A |
2: 119,771,974 (GRCm39) |
D1532E |
possibly damaging |
Het |
Miga1 |
G |
A |
3: 151,984,642 (GRCm39) |
S427L |
probably benign |
Het |
Mknk2 |
A |
T |
10: 80,505,173 (GRCm39) |
V186E |
probably damaging |
Het |
Myo1a |
C |
A |
10: 127,546,086 (GRCm39) |
N236K |
probably benign |
Het |
Myt1 |
A |
G |
2: 181,439,207 (GRCm39) |
D243G |
probably benign |
Het |
Ncf4 |
T |
C |
15: 78,140,189 (GRCm39) |
V196A |
possibly damaging |
Het |
Nlrp5 |
G |
T |
7: 23,117,603 (GRCm39) |
L442F |
probably damaging |
Het |
Olfm4 |
G |
A |
14: 80,258,747 (GRCm39) |
D332N |
probably benign |
Het |
Or4a81 |
C |
A |
2: 89,619,637 (GRCm39) |
V20F |
probably benign |
Het |
Or4b1d |
T |
A |
2: 89,969,432 (GRCm39) |
D17V |
probably damaging |
Het |
Osbpl11 |
T |
A |
16: 33,016,452 (GRCm39) |
M69K |
probably benign |
Het |
Oxnad1 |
T |
A |
14: 31,824,366 (GRCm39) |
*312K |
probably null |
Het |
Plekhg1 |
A |
G |
10: 3,906,985 (GRCm39) |
Q634R |
probably benign |
Het |
Plekhh2 |
T |
C |
17: 84,882,691 (GRCm39) |
Y733H |
probably damaging |
Het |
Ppp1r21 |
A |
G |
17: 88,856,941 (GRCm39) |
H132R |
probably benign |
Het |
Prkcq |
T |
C |
2: 11,284,333 (GRCm39) |
V501A |
possibly damaging |
Het |
Prpf38b |
G |
A |
3: 108,811,408 (GRCm39) |
|
probably benign |
Het |
Prpf4b |
A |
T |
13: 35,083,954 (GRCm39) |
M908L |
probably benign |
Het |
Prps2 |
T |
C |
X: 166,135,288 (GRCm39) |
D183G |
probably damaging |
Het |
Pudp |
T |
C |
18: 50,701,259 (GRCm39) |
D158G |
probably damaging |
Het |
R3hdm1 |
T |
C |
1: 128,112,181 (GRCm39) |
S422P |
probably damaging |
Het |
Ranbp3 |
T |
A |
17: 57,003,640 (GRCm39) |
|
probably null |
Het |
Ranbp6 |
A |
G |
19: 29,787,721 (GRCm39) |
V877A |
probably benign |
Het |
Rgsl1 |
A |
T |
1: 153,693,328 (GRCm39) |
S618T |
probably benign |
Het |
Rhox2a |
A |
T |
X: 36,509,015 (GRCm39) |
I61L |
probably benign |
Het |
Rhox2a |
G |
C |
X: 36,508,962 (GRCm39) |
R43P |
probably benign |
Het |
Rnf207 |
A |
C |
4: 152,396,612 (GRCm39) |
D466E |
probably benign |
Het |
Rnf7 |
A |
G |
9: 96,353,883 (GRCm39) |
I80T |
probably benign |
Het |
Ros1 |
T |
A |
10: 52,005,764 (GRCm39) |
I878F |
possibly damaging |
Het |
Rsbn1 |
T |
A |
3: 103,861,096 (GRCm39) |
|
probably null |
Het |
Sbk1 |
T |
C |
7: 125,890,301 (GRCm39) |
S105P |
probably damaging |
Het |
Sdk1 |
T |
C |
5: 141,992,380 (GRCm39) |
Y790H |
probably damaging |
Het |
Sec62 |
T |
A |
3: 30,864,683 (GRCm39) |
N182K |
unknown |
Het |
Slc15a1 |
T |
C |
14: 121,715,504 (GRCm39) |
Y345C |
probably damaging |
Het |
Slc27a1 |
G |
A |
8: 72,023,408 (GRCm39) |
A15T |
probably benign |
Het |
Slc35d1 |
A |
G |
4: 103,070,426 (GRCm39) |
F110L |
probably damaging |
Het |
Slc39a5 |
T |
A |
10: 128,233,136 (GRCm39) |
S333C |
probably benign |
Het |
Tarbp1 |
A |
G |
8: 127,173,934 (GRCm39) |
S927P |
probably damaging |
Het |
Tns1 |
A |
G |
1: 73,992,930 (GRCm39) |
S583P |
probably damaging |
Het |
Trim38 |
A |
T |
13: 23,966,952 (GRCm39) |
D133V |
probably damaging |
Het |
Trim40 |
T |
C |
17: 37,193,531 (GRCm39) |
|
probably null |
Het |
Trim42 |
C |
A |
9: 97,244,998 (GRCm39) |
V601L |
probably benign |
Het |
Trpc7 |
G |
A |
13: 57,035,367 (GRCm39) |
R189C |
probably damaging |
Het |
Ttc29 |
A |
T |
8: 79,060,208 (GRCm39) |
Y376F |
probably benign |
Het |
Vmn2r63 |
A |
G |
7: 42,553,114 (GRCm39) |
I714T |
possibly damaging |
Het |
Vmn2r68 |
C |
A |
7: 84,870,743 (GRCm39) |
A847S |
probably benign |
Het |
Zbp1 |
G |
A |
2: 173,049,608 (GRCm39) |
P385S |
possibly damaging |
Het |
Zfat |
A |
G |
15: 68,056,325 (GRCm39) |
Y237H |
probably damaging |
Het |
Zfp236 |
A |
T |
18: 82,615,784 (GRCm39) |
W1840R |
probably damaging |
Het |
Zfp426 |
G |
T |
9: 20,381,923 (GRCm39) |
Q341K |
possibly damaging |
Het |
Zfp462 |
T |
A |
4: 55,009,349 (GRCm39) |
N438K |
probably benign |
Het |
Zfp952 |
T |
A |
17: 33,221,899 (GRCm39) |
V88E |
probably damaging |
Het |
Znfx1 |
G |
T |
2: 166,898,276 (GRCm39) |
A216D |
probably benign |
Het |
|
Other mutations in Cspg4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01074:Cspg4
|
APN |
9 |
56,806,149 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01322:Cspg4
|
APN |
9 |
56,805,872 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01922:Cspg4
|
APN |
9 |
56,795,171 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01993:Cspg4
|
APN |
9 |
56,805,762 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02379:Cspg4
|
APN |
9 |
56,799,893 (GRCm39) |
splice site |
probably benign |
|
IGL02398:Cspg4
|
APN |
9 |
56,793,970 (GRCm39) |
missense |
probably benign |
0.43 |
IGL02503:Cspg4
|
APN |
9 |
56,804,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02504:Cspg4
|
APN |
9 |
56,793,056 (GRCm39) |
missense |
probably benign |
0.06 |
IGL02692:Cspg4
|
APN |
9 |
56,794,738 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02728:Cspg4
|
APN |
9 |
56,793,765 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02806:Cspg4
|
APN |
9 |
56,797,543 (GRCm39) |
missense |
possibly damaging |
0.57 |
IGL02886:Cspg4
|
APN |
9 |
56,804,672 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03005:Cspg4
|
APN |
9 |
56,795,772 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03008:Cspg4
|
APN |
9 |
56,805,759 (GRCm39) |
missense |
possibly damaging |
0.48 |
IGL03202:Cspg4
|
APN |
9 |
56,805,023 (GRCm39) |
missense |
possibly damaging |
0.93 |
chiclets
|
UTSW |
9 |
56,792,506 (GRCm39) |
splice site |
probably null |
|
R0066:Cspg4
|
UTSW |
9 |
56,795,418 (GRCm39) |
missense |
probably damaging |
1.00 |
R0066:Cspg4
|
UTSW |
9 |
56,795,418 (GRCm39) |
missense |
probably damaging |
1.00 |
R0254:Cspg4
|
UTSW |
9 |
56,804,694 (GRCm39) |
missense |
probably damaging |
0.98 |
R0284:Cspg4
|
UTSW |
9 |
56,793,423 (GRCm39) |
missense |
probably damaging |
0.96 |
R0513:Cspg4
|
UTSW |
9 |
56,805,375 (GRCm39) |
missense |
probably benign |
0.03 |
R0602:Cspg4
|
UTSW |
9 |
56,795,301 (GRCm39) |
missense |
probably damaging |
1.00 |
R0747:Cspg4
|
UTSW |
9 |
56,797,564 (GRCm39) |
missense |
probably damaging |
1.00 |
R1005:Cspg4
|
UTSW |
9 |
56,796,020 (GRCm39) |
missense |
probably benign |
0.13 |
R1421:Cspg4
|
UTSW |
9 |
56,803,910 (GRCm39) |
missense |
probably benign |
0.00 |
R1443:Cspg4
|
UTSW |
9 |
56,793,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R1481:Cspg4
|
UTSW |
9 |
56,795,094 (GRCm39) |
missense |
probably damaging |
0.98 |
R1585:Cspg4
|
UTSW |
9 |
56,806,151 (GRCm39) |
missense |
probably damaging |
0.99 |
R1624:Cspg4
|
UTSW |
9 |
56,795,754 (GRCm39) |
missense |
probably damaging |
1.00 |
R1670:Cspg4
|
UTSW |
9 |
56,804,687 (GRCm39) |
missense |
probably damaging |
1.00 |
R1721:Cspg4
|
UTSW |
9 |
56,796,027 (GRCm39) |
missense |
probably damaging |
0.98 |
R1728:Cspg4
|
UTSW |
9 |
56,805,821 (GRCm39) |
missense |
probably benign |
0.00 |
R1729:Cspg4
|
UTSW |
9 |
56,805,821 (GRCm39) |
missense |
probably benign |
0.00 |
R1763:Cspg4
|
UTSW |
9 |
56,794,263 (GRCm39) |
missense |
probably damaging |
0.97 |
R1772:Cspg4
|
UTSW |
9 |
56,804,776 (GRCm39) |
missense |
probably benign |
0.02 |
R1938:Cspg4
|
UTSW |
9 |
56,794,385 (GRCm39) |
missense |
probably benign |
0.00 |
R1975:Cspg4
|
UTSW |
9 |
56,797,762 (GRCm39) |
missense |
probably damaging |
1.00 |
R2064:Cspg4
|
UTSW |
9 |
56,803,940 (GRCm39) |
missense |
probably damaging |
1.00 |
R2185:Cspg4
|
UTSW |
9 |
56,794,256 (GRCm39) |
missense |
probably benign |
0.37 |
R2252:Cspg4
|
UTSW |
9 |
56,805,330 (GRCm39) |
missense |
probably damaging |
1.00 |
R2291:Cspg4
|
UTSW |
9 |
56,800,027 (GRCm39) |
missense |
probably damaging |
0.96 |
R2329:Cspg4
|
UTSW |
9 |
56,795,834 (GRCm39) |
missense |
probably benign |
0.00 |
R3780:Cspg4
|
UTSW |
9 |
56,795,517 (GRCm39) |
missense |
probably damaging |
1.00 |
R3830:Cspg4
|
UTSW |
9 |
56,804,905 (GRCm39) |
missense |
probably damaging |
0.99 |
R3944:Cspg4
|
UTSW |
9 |
56,793,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R4011:Cspg4
|
UTSW |
9 |
56,794,601 (GRCm39) |
missense |
probably benign |
0.19 |
R4115:Cspg4
|
UTSW |
9 |
56,805,678 (GRCm39) |
missense |
probably damaging |
1.00 |
R4173:Cspg4
|
UTSW |
9 |
56,795,214 (GRCm39) |
missense |
probably damaging |
1.00 |
R4243:Cspg4
|
UTSW |
9 |
56,795,141 (GRCm39) |
missense |
probably benign |
0.12 |
R4329:Cspg4
|
UTSW |
9 |
56,799,749 (GRCm39) |
missense |
probably damaging |
0.99 |
R4544:Cspg4
|
UTSW |
9 |
56,795,913 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4545:Cspg4
|
UTSW |
9 |
56,795,913 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4546:Cspg4
|
UTSW |
9 |
56,795,913 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4663:Cspg4
|
UTSW |
9 |
56,793,960 (GRCm39) |
missense |
possibly damaging |
0.61 |
R4674:Cspg4
|
UTSW |
9 |
56,805,489 (GRCm39) |
missense |
probably damaging |
1.00 |
R4779:Cspg4
|
UTSW |
9 |
56,793,092 (GRCm39) |
missense |
probably damaging |
1.00 |
R4884:Cspg4
|
UTSW |
9 |
56,805,353 (GRCm39) |
missense |
probably benign |
0.00 |
R5021:Cspg4
|
UTSW |
9 |
56,805,014 (GRCm39) |
missense |
probably benign |
0.01 |
R5051:Cspg4
|
UTSW |
9 |
56,793,020 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5328:Cspg4
|
UTSW |
9 |
56,793,140 (GRCm39) |
missense |
probably benign |
0.01 |
R5394:Cspg4
|
UTSW |
9 |
56,797,484 (GRCm39) |
missense |
probably damaging |
1.00 |
R5567:Cspg4
|
UTSW |
9 |
56,793,932 (GRCm39) |
missense |
probably benign |
0.00 |
R5682:Cspg4
|
UTSW |
9 |
56,793,480 (GRCm39) |
missense |
probably benign |
0.14 |
R5690:Cspg4
|
UTSW |
9 |
56,806,019 (GRCm39) |
missense |
probably benign |
0.01 |
R5715:Cspg4
|
UTSW |
9 |
56,798,335 (GRCm39) |
missense |
possibly damaging |
0.90 |
R5717:Cspg4
|
UTSW |
9 |
56,793,082 (GRCm39) |
missense |
probably benign |
|
R5726:Cspg4
|
UTSW |
9 |
56,793,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R5898:Cspg4
|
UTSW |
9 |
56,792,506 (GRCm39) |
splice site |
probably null |
|
R6140:Cspg4
|
UTSW |
9 |
56,804,508 (GRCm39) |
missense |
probably benign |
0.35 |
R6147:Cspg4
|
UTSW |
9 |
56,796,056 (GRCm39) |
missense |
probably damaging |
0.99 |
R6239:Cspg4
|
UTSW |
9 |
56,795,466 (GRCm39) |
missense |
probably benign |
0.04 |
R6343:Cspg4
|
UTSW |
9 |
56,799,976 (GRCm39) |
missense |
probably benign |
|
R6351:Cspg4
|
UTSW |
9 |
56,799,928 (GRCm39) |
missense |
probably benign |
0.00 |
R6564:Cspg4
|
UTSW |
9 |
56,797,442 (GRCm39) |
missense |
probably benign |
0.02 |
R6814:Cspg4
|
UTSW |
9 |
56,797,624 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6928:Cspg4
|
UTSW |
9 |
56,805,164 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6967:Cspg4
|
UTSW |
9 |
56,797,420 (GRCm39) |
missense |
possibly damaging |
0.52 |
R6981:Cspg4
|
UTSW |
9 |
56,794,385 (GRCm39) |
missense |
probably benign |
0.00 |
R7033:Cspg4
|
UTSW |
9 |
56,795,358 (GRCm39) |
missense |
probably damaging |
0.96 |
R7419:Cspg4
|
UTSW |
9 |
56,795,727 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7809:Cspg4
|
UTSW |
9 |
56,797,474 (GRCm39) |
missense |
probably damaging |
1.00 |
R7940:Cspg4
|
UTSW |
9 |
56,795,381 (GRCm39) |
nonsense |
probably null |
|
R8078:Cspg4
|
UTSW |
9 |
56,797,543 (GRCm39) |
missense |
possibly damaging |
0.57 |
R8082:Cspg4
|
UTSW |
9 |
56,793,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R8217:Cspg4
|
UTSW |
9 |
56,797,637 (GRCm39) |
missense |
possibly damaging |
0.53 |
R8237:Cspg4
|
UTSW |
9 |
56,799,964 (GRCm39) |
missense |
probably damaging |
1.00 |
R8353:Cspg4
|
UTSW |
9 |
56,805,953 (GRCm39) |
missense |
probably damaging |
1.00 |
R8372:Cspg4
|
UTSW |
9 |
56,794,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R8691:Cspg4
|
UTSW |
9 |
56,800,280 (GRCm39) |
missense |
probably benign |
|
R8720:Cspg4
|
UTSW |
9 |
56,794,797 (GRCm39) |
missense |
probably benign |
0.25 |
R8907:Cspg4
|
UTSW |
9 |
56,790,967 (GRCm39) |
missense |
probably damaging |
1.00 |
R9063:Cspg4
|
UTSW |
9 |
56,795,687 (GRCm39) |
missense |
probably benign |
0.03 |
R9115:Cspg4
|
UTSW |
9 |
56,797,736 (GRCm39) |
missense |
probably damaging |
1.00 |
R9152:Cspg4
|
UTSW |
9 |
56,795,463 (GRCm39) |
missense |
probably benign |
0.26 |
R9154:Cspg4
|
UTSW |
9 |
56,798,287 (GRCm39) |
missense |
|
|
R9361:Cspg4
|
UTSW |
9 |
56,803,877 (GRCm39) |
missense |
probably damaging |
1.00 |
R9574:Cspg4
|
UTSW |
9 |
56,797,342 (GRCm39) |
missense |
probably damaging |
1.00 |
R9608:Cspg4
|
UTSW |
9 |
56,792,836 (GRCm39) |
missense |
probably benign |
|
R9685:Cspg4
|
UTSW |
9 |
56,797,622 (GRCm39) |
missense |
probably benign |
0.05 |
X0065:Cspg4
|
UTSW |
9 |
56,793,020 (GRCm39) |
missense |
possibly damaging |
0.95 |
Z1088:Cspg4
|
UTSW |
9 |
56,793,320 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TCATGGTGATCCTGGAACACAC -3'
(R):5'- TACCAGTGACTCGGAACAGC -3'
Sequencing Primer
(F):5'- GTGATCCTGGAACACACACAGAAG -3'
(R):5'- CGCGTTCGTTTCTACTGACAGG -3'
|
Posted On |
2015-10-08 |