Incidental Mutation 'R4616:Tbc1d22a'
ID 351065
Institutional Source Beutler Lab
Gene Symbol Tbc1d22a
Ensembl Gene ENSMUSG00000051864
Gene Name TBC1 domain family, member 22a
Synonyms D15Ertd781e
MMRRC Submission 041827-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4616 (G1)
Quality Score 225
Status Validated
Chromosome 15
Chromosomal Location 86214459-86498503 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to G at 86235685 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 61 (T61A)
Ref Sequence ENSEMBL: ENSMUSP00000155727 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000063414] [ENSMUST00000229242]
AlphaFold Q8R5A6
Predicted Effect possibly damaging
Transcript: ENSMUST00000063414
AA Change: T97A

PolyPhen 2 Score 0.787 (Sensitivity: 0.85; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000065721
Gene: ENSMUSG00000051864
AA Change: T97A

DomainStartEndE-ValueType
Blast:TBC 25 94 5e-34 BLAST
low complexity region 118 133 N/A INTRINSIC
TBC 218 471 2.35e-43 SMART
Blast:TBC 476 515 1e-9 BLAST
Predicted Effect probably damaging
Transcript: ENSMUST00000229242
AA Change: T61A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Meta Mutation Damage Score 0.1846 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.6%
Validation Efficiency 100% (64/64)
Allele List at MGI
Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acod1 C T 14: 103,055,345 (GRCm38) T435M probably benign Het
Adgrf5 T C 17: 43,452,440 (GRCm38) F1078L probably benign Het
Adh6a A T 3: 138,324,947 (GRCm38) N110I probably damaging Het
Aldh16a1 T C 7: 45,148,788 (GRCm38) probably benign Het
Aopep G A 13: 63,298,751 (GRCm38) E123K probably damaging Het
Arhgef17 A G 7: 100,882,485 (GRCm38) F1302S probably damaging Het
Bcl2a1a C T 9: 88,957,453 (GRCm38) R135W probably damaging Het
Bpifa6 T C 2: 153,982,988 (GRCm38) S28P possibly damaging Het
C9 A G 15: 6,491,463 (GRCm38) D51G probably damaging Het
Cfb T A 17: 34,859,068 (GRCm38) H962L probably benign Het
Chn2 G A 6: 54,290,403 (GRCm38) M292I probably damaging Het
Clec16a T A 16: 10,644,883 (GRCm38) probably null Het
Cyp1a1 T C 9: 57,701,756 (GRCm38) S307P probably benign Het
Dsg3 T C 18: 20,531,559 (GRCm38) V538A probably benign Het
Erbb3 G A 10: 128,572,770 (GRCm38) Q815* probably null Het
Fam90a1a C A 8: 21,963,846 (GRCm38) Q406K possibly damaging Het
Frmd3 T C 4: 74,187,872 (GRCm38) V585A probably benign Het
Gm8214 T C 1: 183,681,897 (GRCm38) noncoding transcript Het
Gpld1 G A 13: 24,984,816 (GRCm38) G771D probably damaging Het
Gpr20 T C 15: 73,695,736 (GRCm38) N268S probably benign Het
Gria2 A T 3: 80,706,897 (GRCm38) I612N probably damaging Het
Ifit1bl1 T C 19: 34,594,610 (GRCm38) E149G probably damaging Het
Ighv1-82 T C 12: 115,952,660 (GRCm38) T77A probably benign Het
Ighv2-9 G T 12: 113,879,219 (GRCm38) T76K probably damaging Het
Igkv6-13 A T 6: 70,458,035 (GRCm38) M1K probably null Het
Igkv8-21 A T 6: 70,315,157 (GRCm38) S34T probably benign Het
Itpr1 A G 6: 108,481,223 (GRCm38) N1985D probably damaging Het
Jkampl A G 6: 73,469,269 (GRCm38) V99A probably benign Het
Lama3 T C 18: 12,504,397 (GRCm38) probably null Het
Lamc2 T C 1: 153,166,169 (GRCm38) Y73C probably damaging Het
Maff A G 15: 79,357,698 (GRCm38) D105G probably damaging Het
Mep1a C T 17: 43,486,241 (GRCm38) V312M possibly damaging Het
Mfap4 C A 11: 61,485,509 (GRCm38) probably benign Het
Mplkipl1 C T 19: 61,175,926 (GRCm38) G24R unknown Het
Mrgbp A T 2: 180,585,314 (GRCm38) silent Het
Mtmr4 T C 11: 87,610,935 (GRCm38) L548S probably damaging Het
Myo7b T C 18: 32,003,487 (GRCm38) probably null Het
Myo9a T C 9: 59,821,649 (GRCm38) I596T probably damaging Het
Or2f1b G T 6: 42,762,418 (GRCm38) R122L probably benign Het
Or52e3 C T 7: 103,220,422 (GRCm38) R235* probably null Het
Pcsk5 T G 19: 17,560,750 (GRCm38) Q904H probably benign Het
Pdzrn3 G T 6: 101,152,009 (GRCm38) H565Q probably damaging Het
Phkg2 C T 7: 127,577,620 (GRCm38) R61W probably damaging Het
Pkd2l1 C A 19: 44,154,134 (GRCm38) A490S probably damaging Het
Pomgnt1 T A 4: 116,154,890 (GRCm38) I337N probably damaging Het
Psmd3 T C 11: 98,682,926 (GRCm38) V66A probably benign Het
Ptger3 T C 3: 157,567,294 (GRCm38) S93P probably damaging Het
Rbm27 T A 18: 42,301,775 (GRCm38) D301E probably damaging Het
Rdh16 A T 10: 127,801,513 (GRCm38) probably null Het
Slc35a5 A T 16: 45,144,292 (GRCm38) F193I probably benign Het
Slc4a4 A G 5: 89,038,561 (GRCm38) K167R probably damaging Het
Sort1 A T 3: 108,355,541 (GRCm38) T772S possibly damaging Het
Sptbn5 T A 2: 120,048,757 (GRCm38) noncoding transcript Het
Stard5 G T 7: 83,633,281 (GRCm38) probably benign Het
Tox2 T C 2: 163,320,647 (GRCm38) L479P probably damaging Het
Usp53 A T 3: 122,959,120 (GRCm38) M80K probably damaging Het
Vmn1r209 A T 13: 22,805,965 (GRCm38) L185Q probably damaging Het
Vmn2r59 A G 7: 42,012,438 (GRCm38) I651T probably benign Het
Vsig1 G T X: 140,926,386 (GRCm38) A95S probably benign Het
Zfhx4 T C 3: 5,413,067 (GRCm38) S3556P possibly damaging Het
Other mutations in Tbc1d22a
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01022:Tbc1d22a APN 15 86,301,555 (GRCm38) missense probably damaging 1.00
IGL01483:Tbc1d22a APN 15 86,391,203 (GRCm38) missense probably benign 0.24
IGL02137:Tbc1d22a APN 15 86,299,669 (GRCm38) missense probably benign 0.02
IGL02543:Tbc1d22a APN 15 86,239,171 (GRCm38) missense probably benign 0.30
R0138:Tbc1d22a UTSW 15 86,299,684 (GRCm38) missense probably damaging 1.00
R1168:Tbc1d22a UTSW 15 86,292,134 (GRCm38) missense probably benign 0.01
R1294:Tbc1d22a UTSW 15 86,496,826 (GRCm38) missense probably damaging 0.98
R1565:Tbc1d22a UTSW 15 86,235,569 (GRCm38) missense possibly damaging 0.48
R1586:Tbc1d22a UTSW 15 86,351,651 (GRCm38) splice site probably null
R1703:Tbc1d22a UTSW 15 86,239,215 (GRCm38) missense probably benign 0.09
R1822:Tbc1d22a UTSW 15 86,235,569 (GRCm38) missense possibly damaging 0.48
R1823:Tbc1d22a UTSW 15 86,235,569 (GRCm38) missense possibly damaging 0.48
R1824:Tbc1d22a UTSW 15 86,235,569 (GRCm38) missense possibly damaging 0.48
R1925:Tbc1d22a UTSW 15 86,239,149 (GRCm38) missense probably damaging 1.00
R2014:Tbc1d22a UTSW 15 86,299,684 (GRCm38) missense probably damaging 0.99
R2015:Tbc1d22a UTSW 15 86,299,684 (GRCm38) missense probably damaging 0.99
R2035:Tbc1d22a UTSW 15 86,391,065 (GRCm38) splice site probably null
R4380:Tbc1d22a UTSW 15 86,351,734 (GRCm38) missense probably damaging 1.00
R4690:Tbc1d22a UTSW 15 86,311,836 (GRCm38) missense probably damaging 1.00
R4825:Tbc1d22a UTSW 15 86,351,734 (GRCm38) missense probably damaging 1.00
R4883:Tbc1d22a UTSW 15 86,496,916 (GRCm38) missense possibly damaging 0.91
R4920:Tbc1d22a UTSW 15 86,311,748 (GRCm38) missense probably benign 0.20
R4979:Tbc1d22a UTSW 15 86,391,086 (GRCm38) missense probably damaging 1.00
R5913:Tbc1d22a UTSW 15 86,351,728 (GRCm38) missense probably damaging 0.98
R5916:Tbc1d22a UTSW 15 86,214,608 (GRCm38) missense possibly damaging 0.57
R6360:Tbc1d22a UTSW 15 86,214,629 (GRCm38) missense probably damaging 1.00
R6483:Tbc1d22a UTSW 15 86,301,567 (GRCm38) missense possibly damaging 0.48
R7138:Tbc1d22a UTSW 15 86,239,155 (GRCm38) missense probably benign 0.07
R7294:Tbc1d22a UTSW 15 86,311,835 (GRCm38) missense possibly damaging 0.90
R7645:Tbc1d22a UTSW 15 86,235,541 (GRCm38) missense probably benign 0.01
R7704:Tbc1d22a UTSW 15 86,366,675 (GRCm38) missense probably damaging 1.00
R9204:Tbc1d22a UTSW 15 86,214,602 (GRCm38) missense probably benign 0.15
R9370:Tbc1d22a UTSW 15 86,239,240 (GRCm38) missense probably benign 0.00
R9459:Tbc1d22a UTSW 15 86,235,820 (GRCm38) missense possibly damaging 0.57
R9792:Tbc1d22a UTSW 15 86,235,638 (GRCm38) missense probably damaging 0.99
R9793:Tbc1d22a UTSW 15 86,235,638 (GRCm38) missense probably damaging 0.99
RF013:Tbc1d22a UTSW 15 86,299,774 (GRCm38) frame shift probably null
Predicted Primers PCR Primer
(F):5'- TGAAGTACCTTCTCCCTTGGG -3'
(R):5'- CATCCCTACCTGAAGGACAAGG -3'

Sequencing Primer
(F):5'- GTGTGCACAGTAAAGACACCTTTG -3'
(R):5'- AAGGAGTGTGGCTCTCACTGAC -3'
Posted On 2015-10-08