Incidental Mutation 'R4640:Nlrp4g'
| ID |
351613 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Nlrp4g
|
| Ensembl Gene |
ENSMUSG00000079741 |
| Gene Name |
NLR family, pyrin domain containing 4G |
| Synonyms |
nalp4g |
| MMRRC Submission |
041902-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.078)
|
| Stock # |
R4640 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
9 |
| Chromosomal Location |
124117991-124126089 bp(-) (GRCm39) |
| Type of Mutation |
unclassified |
| DNA Base Change (assembly) |
T to C
at 124349153 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Gene Model |
predicted gene model for transcript(s):
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000067621
|
| SMART Domains |
Protein: ENSMUSP00000065508
Gene: ENSMUSG00000079741
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:NACHT
|
69 |
238 |
1.5e-39 |
PFAM |
|
Blast:LRR
|
555 |
582 |
9e-10 |
BLAST |
|
Blast:LRR
|
610 |
637 |
7e-10 |
BLAST |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000214229
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215276
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215602
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216416
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000217178
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000217183
|
| Meta Mutation Damage Score |
0.3875 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.4%
|
| Validation Efficiency |
93% (39/42) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 36 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamts16 |
G |
A |
13: 70,927,637 (GRCm39) |
|
probably benign |
Het |
| Adgrl4 |
T |
C |
3: 151,205,947 (GRCm39) |
|
probably benign |
Het |
| Ano4 |
C |
T |
10: 88,790,559 (GRCm39) |
A847T |
probably damaging |
Het |
| Atp11a |
A |
G |
8: 12,878,434 (GRCm39) |
|
probably benign |
Het |
| Cct4 |
T |
A |
11: 22,952,297 (GRCm39) |
S463T |
probably benign |
Het |
| Cfap251 |
G |
T |
5: 123,440,495 (GRCm39) |
V1094L |
probably benign |
Het |
| Cnmd |
T |
C |
14: 79,894,093 (GRCm39) |
N98S |
probably damaging |
Het |
| Copz2 |
A |
T |
11: 96,747,533 (GRCm39) |
Q172L |
possibly damaging |
Het |
| Ctdp1 |
C |
A |
18: 80,494,369 (GRCm39) |
|
probably null |
Het |
| Cyfip1 |
C |
T |
7: 55,563,199 (GRCm39) |
T865I |
possibly damaging |
Het |
| Cyp2c37 |
A |
T |
19: 40,000,276 (GRCm39) |
D466V |
possibly damaging |
Het |
| Dytn |
A |
G |
1: 63,682,507 (GRCm39) |
L380P |
possibly damaging |
Het |
| Fam124b |
G |
A |
1: 80,191,243 (GRCm39) |
R47C |
probably damaging |
Het |
| Foxe3 |
G |
A |
4: 114,782,972 (GRCm39) |
A80V |
probably damaging |
Het |
| Gm5884 |
A |
G |
6: 128,622,734 (GRCm39) |
|
noncoding transcript |
Het |
| Kera |
A |
T |
10: 97,448,749 (GRCm39) |
Y323F |
probably damaging |
Het |
| Lipf |
A |
T |
19: 33,946,197 (GRCm39) |
Y205F |
probably damaging |
Het |
| Lipo2 |
T |
C |
19: 33,698,237 (GRCm39) |
E380G |
probably benign |
Het |
| Mcm2 |
A |
T |
6: 88,864,786 (GRCm39) |
H563Q |
possibly damaging |
Het |
| Mindy3 |
T |
C |
2: 12,352,974 (GRCm39) |
E409G |
probably benign |
Het |
| Mns1 |
A |
G |
9: 72,346,564 (GRCm39) |
K16E |
probably benign |
Het |
| Naip5 |
T |
A |
13: 100,356,338 (GRCm39) |
E1092D |
probably benign |
Het |
| Nrxn1 |
A |
G |
17: 90,868,196 (GRCm39) |
S1105P |
probably damaging |
Het |
| Odf2l |
G |
A |
3: 144,834,706 (GRCm39) |
R186H |
probably damaging |
Het |
| Or13g1 |
T |
A |
7: 85,956,274 (GRCm39) |
T16S |
probably benign |
Het |
| Or2d3c |
T |
C |
7: 106,525,800 (GRCm39) |
I289V |
possibly damaging |
Het |
| Phxr2 |
T |
C |
10: 98,961,931 (GRCm39) |
|
probably benign |
Het |
| Plcxd3 |
T |
C |
15: 4,546,725 (GRCm39) |
F243S |
probably damaging |
Het |
| Ppp1r27 |
T |
C |
11: 120,441,553 (GRCm39) |
N76D |
possibly damaging |
Het |
| Ptprz1 |
A |
G |
6: 22,972,797 (GRCm39) |
T236A |
probably damaging |
Het |
| Pyroxd1 |
C |
G |
6: 142,300,467 (GRCm39) |
S199* |
probably null |
Het |
| R3hdm1 |
T |
C |
1: 128,102,975 (GRCm39) |
|
probably benign |
Het |
| Sall2 |
T |
A |
14: 52,552,616 (GRCm39) |
Q193L |
probably damaging |
Het |
| Srpk1 |
T |
C |
17: 28,827,698 (GRCm39) |
S39G |
probably benign |
Het |
| Tcaf3 |
A |
G |
6: 42,564,513 (GRCm39) |
V883A |
probably damaging |
Het |
| Tmem104 |
T |
A |
11: 115,134,550 (GRCm39) |
V362E |
probably damaging |
Het |
|
| Other mutations in Nlrp4g |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01066:Nlrp4g
|
APN |
9 |
124,349,526 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL01087:Nlrp4g
|
APN |
9 |
124,353,858 (GRCm38) |
critical splice acceptor site |
noncoding transcript |
|
|
IGL01106:Nlrp4g
|
APN |
9 |
124,350,452 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL01938:Nlrp4g
|
APN |
9 |
124,349,068 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL02088:Nlrp4g
|
APN |
9 |
124,350,453 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL02170:Nlrp4g
|
APN |
9 |
124,348,980 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL02582:Nlrp4g
|
APN |
9 |
124,349,764 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL02588:Nlrp4g
|
APN |
9 |
124,348,843 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL02931:Nlrp4g
|
APN |
9 |
124,348,940 (GRCm38) |
unclassified |
noncoding transcript |
|
|
IGL03111:Nlrp4g
|
APN |
9 |
124,353,978 (GRCm38) |
exon |
noncoding transcript |
|
|
IGL03373:Nlrp4g
|
APN |
9 |
124,349,853 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R0617:Nlrp4g
|
UTSW |
9 |
124,349,540 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R1419:Nlrp4g
|
UTSW |
9 |
124,349,434 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R2060:Nlrp4g
|
UTSW |
9 |
124,349,693 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R2152:Nlrp4g
|
UTSW |
9 |
124,353,339 (GRCm38) |
exon |
noncoding transcript |
|
|
R2356:Nlrp4g
|
UTSW |
9 |
124,349,306 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R2384:Nlrp4g
|
UTSW |
9 |
124,349,707 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R2698:Nlrp4g
|
UTSW |
9 |
124,349,630 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R3878:Nlrp4g
|
UTSW |
9 |
124,349,362 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R4745:Nlrp4g
|
UTSW |
9 |
124,349,515 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R4754:Nlrp4g
|
UTSW |
9 |
124,349,788 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R4937:Nlrp4g
|
UTSW |
9 |
124,354,005 (GRCm38) |
exon |
noncoding transcript |
|
|
R5024:Nlrp4g
|
UTSW |
9 |
124,350,155 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R5162:Nlrp4g
|
UTSW |
9 |
124,350,394 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R5407:Nlrp4g
|
UTSW |
9 |
124,349,930 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R5521:Nlrp4g
|
UTSW |
9 |
124,350,020 (GRCm38) |
unclassified |
noncoding transcript |
|
|
R8224:Nlrp4g
|
UTSW |
9 |
124,353,374 (GRCm38) |
missense |
noncoding transcript |
|
|
R8259:Nlrp4g
|
UTSW |
9 |
124,353,392 (GRCm38) |
missense |
noncoding transcript |
|
|
Z1088:Nlrp4g
|
UTSW |
9 |
124,349,201 (GRCm38) |
unclassified |
noncoding transcript |
|
|
| Predicted Primers |
PCR Primer
(F):5'- ACTGTGACACTTTTGAGAACCTTC -3'
(R):5'- GCATCTTCCTCGTGAGCAAAC -3'
Sequencing Primer
(F):5'- GAACCTTCTCATATCAAAGGGAACTG -3'
(R):5'- AGCAGTATACTCACTGGCTGC -3'
|
| Posted On |
2015-10-08 |
Incidental Mutation