Mutagenetix > Incidental Mutation

Incidental Mutation 'R4667:Chd9'

352046

Institutional Source

Beutler Lab

Gene Symbol

Chd9

Ensembl Gene

ENSMUSG00000056608

Gene Name

chromodomain helicase DNA binding protein 9

Synonyms

AD013, 1810014J18Rik, 9030205D12Rik, A330063D19Rik

MMRRC Submission

042012-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R4667 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

91554980-91781144 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 91760428 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 2058 (S2058P)

Ref Sequence

ENSEMBL: ENSMUSP00000148088 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000048665] [ENSMUST00000109614] [ENSMUST00000209203] [ENSMUST00000209423]

AlphaFold

no structure available at present

Predicted Effect

possibly damaging
Transcript: ENSMUST00000048665
AA Change: S2058P

PolyPhen 2 Score 0.734 (Sensitivity: 0.85; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000046356
Gene: ENSMUSG00000056608
AA Change: S2058P

Domain	Start	End	E-Value	Type
low complexity region	323	334	N/A	INTRINSIC
low complexity region	586	605	N/A	INTRINSIC
CHROMO	687	753	2.41e-10	SMART
CHROMO	770	828	4.35e-8	SMART
DEXDc	855	1056	3.8e-36	SMART
Blast:DEXDc	1149	1174	7e-6	BLAST
HELICc	1211	1295	2.86e-22	SMART
low complexity region	1462	1475	N/A	INTRINSIC
Blast:DEXDc	1506	1551	3e-16	BLAST
low complexity region	2048	2067	N/A	INTRINSIC
low complexity region	2127	2199	N/A	INTRINSIC
BRK	2456	2505	6.77e-25	SMART
BRK	2530	2574	1.5e-17	SMART
low complexity region	2594	2608	N/A	INTRINSIC
low complexity region	2609	2639	N/A	INTRINSIC
low complexity region	2642	2659	N/A	INTRINSIC
low complexity region	2690	2704	N/A	INTRINSIC
low complexity region	2746	2771	N/A	INTRINSIC
low complexity region	2802	2813	N/A	INTRINSIC
low complexity region	2843	2869	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000109614
AA Change: S2058P

PolyPhen 2 Score 0.734 (Sensitivity: 0.85; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000105243
Gene: ENSMUSG00000056608
AA Change: S2058P

Domain	Start	End	E-Value	Type
low complexity region	323	334	N/A	INTRINSIC
low complexity region	586	605	N/A	INTRINSIC
CHROMO	687	753	2.41e-10	SMART
CHROMO	770	828	4.35e-8	SMART
DEXDc	855	1056	3.8e-36	SMART
Blast:DEXDc	1149	1174	7e-6	BLAST
HELICc	1211	1295	2.86e-22	SMART
low complexity region	1462	1475	N/A	INTRINSIC
Blast:DEXDc	1506	1551	3e-16	BLAST
low complexity region	2048	2067	N/A	INTRINSIC
low complexity region	2127	2199	N/A	INTRINSIC
BRK	2472	2521	6.77e-25	SMART
BRK	2546	2590	1.5e-17	SMART
low complexity region	2610	2624	N/A	INTRINSIC
low complexity region	2625	2655	N/A	INTRINSIC
low complexity region	2658	2675	N/A	INTRINSIC
low complexity region	2706	2720	N/A	INTRINSIC
low complexity region	2762	2787	N/A	INTRINSIC
low complexity region	2818	2829	N/A	INTRINSIC
low complexity region	2859	2885	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000209203

Predicted Effect

possibly damaging
Transcript: ENSMUST00000209423
AA Change: S2058P

PolyPhen 2 Score 0.734 (Sensitivity: 0.85; Specificity: 0.92)

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 97.1%
20x: 95.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 109 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acad8	A	G	9: 26,901,923 (GRCm39)	L147P	probably damaging	Het
Adgra3	T	A	5: 50,136,298 (GRCm39)	Y729F	possibly damaging	Het
Ago2	A	G	15: 73,018,265 (GRCm39)	Y58H	probably damaging	Het
Akap13	A	G	7: 75,378,842 (GRCm39)	T2128A	probably damaging	Het
Ankhd1	C	A	18: 36,781,074 (GRCm39)	P2042Q	possibly damaging	Het
Arhgef15	T	C	11: 68,845,387 (GRCm39)	K155R	probably benign	Het
Atp10b	T	C	11: 43,138,345 (GRCm39)	F1209L	probably damaging	Het
B130006D01Rik	A	T	11: 95,617,335 (GRCm39)		probably benign	Het
Bmpr2	T	C	1: 59,906,875 (GRCm39)	L656S	probably damaging	Het
Bnip5	G	T	17: 29,127,287 (GRCm39)	Q241K	possibly damaging	Het
Btbd17	A	G	11: 114,684,683 (GRCm39)	F119L	possibly damaging	Het
Ccdc191	G	T	16: 43,751,646 (GRCm39)	K267N	probably damaging	Het
Cd200l1	A	G	16: 45,264,526 (GRCm39)	S11P	probably benign	Het
Ceacam20	T	C	7: 19,719,952 (GRCm39)	Y495H	probably damaging	Het
Celf2	T	C	2: 6,726,339 (GRCm39)	I47V	probably benign	Het
Cemip2	G	A	19: 21,774,715 (GRCm39)	R119H	probably benign	Het
Cemip2	C	T	19: 21,822,145 (GRCm39)	A1180V	probably benign	Het
Clcn6	T	C	4: 148,108,624 (GRCm39)	E135G	possibly damaging	Het
Cntn1	T	A	15: 92,192,960 (GRCm39)	N687K	probably damaging	Het
Col1a2	A	T	6: 4,512,412 (GRCm39)	M99L	unknown	Het
Cpeb2	T	C	5: 43,391,235 (GRCm39)		probably benign	Het
Csn1s2b	A	G	5: 87,970,170 (GRCm39)	T134A	possibly damaging	Het
Cst13	A	T	2: 148,665,001 (GRCm39)		probably benign	Het
Cyp2c66	T	A	19: 39,165,100 (GRCm39)	D360E	probably damaging	Het
Dhx8	A	G	11: 101,628,987 (GRCm39)	S179G	unknown	Het
Dip2b	A	G	15: 100,049,241 (GRCm39)	I212V	probably benign	Het
Dnah9	G	A	11: 66,046,357 (GRCm39)	H64Y	probably benign	Het
Dnal1	T	C	12: 84,183,474 (GRCm39)		probably benign	Het
Dse	T	G	10: 34,029,008 (GRCm39)	Y694S	probably damaging	Het
Dync2h1	T	C	9: 7,051,411 (GRCm39)	I3175V	probably benign	Het
Elf5	A	G	2: 103,279,405 (GRCm39)	N209D	probably damaging	Het
Elovl1	A	G	4: 118,287,984 (GRCm39)	Y40C	probably damaging	Het
Erp27	T	C	6: 136,885,150 (GRCm39)	E216G	possibly damaging	Het
F5	G	A	1: 164,001,755 (GRCm39)	V153I	probably benign	Het
Fam186a	G	A	15: 99,842,413 (GRCm39)	T1277I	possibly damaging	Het
Fam90a1a	A	T	8: 22,453,362 (GRCm39)	H239L	possibly damaging	Het
Fchsd2	G	T	7: 100,899,656 (GRCm39)	R334L	probably damaging	Het
Fermt3	T	C	19: 6,980,288 (GRCm39)	Y369C	probably damaging	Het
Fhod3	C	T	18: 25,199,395 (GRCm39)	P689S	probably benign	Het
Fnbp1l	G	T	3: 122,350,216 (GRCm39)	Q332K	probably benign	Het
Frem3	T	C	8: 81,390,049 (GRCm39)	S1767P	probably damaging	Het
Ggt5	T	C	10: 75,438,865 (GRCm39)	L121P	probably damaging	Het
Gphn	T	C	12: 78,501,591 (GRCm39)	S119P	probably damaging	Het
Herc2	A	G	7: 55,781,001 (GRCm39)	D1222G	probably damaging	Het
Hmx3	T	C	7: 131,146,111 (GRCm39)	I273T	possibly damaging	Het
Hnrnpu	A	G	1: 178,159,746 (GRCm39)		probably benign	Het
Hspg2	C	T	4: 137,266,956 (GRCm39)	T1987I	possibly damaging	Het
Ighv1-22	T	A	12: 114,710,071 (GRCm39)	Q58L	probably damaging	Het
Ighv14-3	T	A	12: 114,023,875 (GRCm39)	I7F	probably benign	Het
Kcns3	C	A	12: 11,141,784 (GRCm39)	R305L	probably damaging	Het
Kcnu1	C	T	8: 26,400,949 (GRCm39)	A699V	possibly damaging	Het
Kif22	A	C	7: 126,632,500 (GRCm39)	L270W	probably damaging	Het
Lrp2	G	T	2: 69,319,642 (GRCm39)	H1960Q	probably benign	Het
Marchf7	C	T	2: 60,071,394 (GRCm39)	Q94*	probably null	Het
Mcoln3	A	T	3: 145,836,959 (GRCm39)	I264F	probably benign	Het
Mdn1	A	C	4: 32,679,572 (GRCm39)	T706P	probably damaging	Het
Mfsd2b	A	G	12: 4,917,636 (GRCm39)	C137R	probably benign	Het
Mmp25	A	G	17: 23,863,581 (GRCm39)	V83A	probably benign	Het
Mocos	T	C	18: 24,799,491 (GRCm39)	Y242H	probably benign	Het
Msh6	T	C	17: 88,292,234 (GRCm39)	S330P	possibly damaging	Het
Mtus2	T	C	5: 148,235,070 (GRCm39)	S1156P	possibly damaging	Het
Muc5b	G	A	7: 141,396,116 (GRCm39)	R124H	unknown	Het
Mybbp1a	G	A	11: 72,338,797 (GRCm39)	E775K	possibly damaging	Het
Myo10	A	G	15: 25,793,239 (GRCm39)	E1272G	possibly damaging	Het
Nars1	A	G	18: 64,638,302 (GRCm39)	S254P	possibly damaging	Het
Ncapd2	A	G	6: 125,161,481 (GRCm39)	I211T	possibly damaging	Het
Ncoa7	A	T	10: 30,566,786 (GRCm39)	W582R	probably damaging	Het
Npr3	T	A	15: 11,905,553 (GRCm39)	D58V	possibly damaging	Het
Nr3c1	G	T	18: 39,561,780 (GRCm39)	T430K	probably benign	Het
Odf2l	A	G	3: 144,833,801 (GRCm39)	T111A	probably benign	Het
Ogdh	G	T	11: 6,290,600 (GRCm39)	C406F	probably benign	Het
Olfml2a	T	G	2: 38,839,022 (GRCm39)	S190A	probably damaging	Het
Optn	T	C	2: 5,037,950 (GRCm39)	K415E	probably benign	Het
Or10n1	T	C	9: 39,525,034 (GRCm39)	M57T	probably damaging	Het
Or52a20	A	G	7: 103,365,845 (GRCm39)	T15A	probably benign	Het
Or8b12i	T	C	9: 20,082,394 (GRCm39)	I158V	probably benign	Het
Or8g52	G	T	9: 39,631,005 (GRCm39)	V161F	probably benign	Het
Pakap	A	T	4: 57,855,655 (GRCm39)	D328V	possibly damaging	Het
Perm1	C	A	4: 156,304,663 (GRCm39)	S803*	probably null	Het
Pex14	T	C	4: 149,068,542 (GRCm39)	T84A	probably benign	Het
Pih1d2	T	A	9: 50,532,252 (GRCm39)	Y103*	probably null	Het
Pikfyve	T	A	1: 65,289,432 (GRCm39)	C1235S	probably damaging	Het
Polr1a	A	G	6: 71,894,805 (GRCm39)	N171S	probably benign	Het
Prrx1	A	G	1: 163,081,616 (GRCm39)	S201P	probably benign	Het
Psme2b	A	T	11: 48,836,493 (GRCm39)	N151K	probably benign	Het
Serpinb5	A	T	1: 106,800,025 (GRCm39)	T72S	probably benign	Het
Sgsm1	A	G	5: 113,407,913 (GRCm39)		probably null	Het
Sipa1l2	T	C	8: 126,180,209 (GRCm39)	R1063G	possibly damaging	Het
Slc19a3	T	C	1: 83,000,520 (GRCm39)	T166A	probably benign	Het
Slc5a4b	T	C	10: 75,910,879 (GRCm39)	Y319C	possibly damaging	Het
Stard3nl	T	A	13: 19,560,689 (GRCm39)	N29Y	probably damaging	Het
Sult6b2	G	T	6: 142,747,421 (GRCm39)	C109*	probably null	Het
Tcf25	A	G	8: 124,123,764 (GRCm39)	E467G	possibly damaging	Het
Tmem177	A	T	1: 119,837,950 (GRCm39)	V243D	probably benign	Het
Top2b	T	G	14: 16,409,189 (GRCm38)	I777M	probably damaging	Het
Tspan11	T	A	6: 127,920,678 (GRCm39)	C208*	probably null	Het
Ttc1	A	G	11: 43,636,144 (GRCm39)	V33A	probably benign	Het
Tut4	G	A	4: 108,352,356 (GRCm39)	E357K	probably damaging	Het
Uck1	T	A	2: 32,146,046 (GRCm39)	H283L	probably damaging	Het
Utrn	A	C	10: 12,573,797 (GRCm39)	V1091G	probably benign	Het
Vmn1r11	A	T	6: 57,114,483 (GRCm39)	H49L	probably damaging	Het
Vmn1r160	G	T	7: 22,571,478 (GRCm39)	S277I	probably benign	Het
Vmn1r18	A	T	6: 57,367,069 (GRCm39)	S162T	probably benign	Het
Vps37b	A	G	5: 124,148,795 (GRCm39)	L80P	probably damaging	Het
Wfdc3	T	C	2: 164,585,006 (GRCm39)	M1V	probably null	Het
Wrn	A	T	8: 33,814,366 (GRCm39)	N116K	probably benign	Het
Wscd2	G	T	5: 113,715,333 (GRCm39)	G391V	probably damaging	Het
Zfp286	A	G	11: 62,671,428 (GRCm39)	V215A	probably benign	Het
Zfp568	A	G	7: 29,722,702 (GRCm39)	H549R	probably damaging	Het

Other mutations in Chd9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00420:Chd9	APN	8	91,752,020 (GRCm39)	missense	possibly damaging	0.79
IGL00547:Chd9	APN	8	91,732,426 (GRCm39)	missense	probably damaging	1.00
IGL00589:Chd9	APN	8	91,742,474 (GRCm39)	missense	probably damaging	1.00
IGL00640:Chd9	APN	8	91,712,760 (GRCm39)	missense	probably damaging	0.99
IGL00663:Chd9	APN	8	91,710,118 (GRCm39)	missense	probably damaging	1.00
IGL00852:Chd9	APN	8	91,699,835 (GRCm39)	missense	probably benign	0.29
IGL00908:Chd9	APN	8	91,723,508 (GRCm39)	missense	probably damaging	1.00
IGL00911:Chd9	APN	8	91,778,320 (GRCm39)	missense	probably damaging	1.00
IGL01068:Chd9	APN	8	91,768,744 (GRCm39)	missense	probably benign	0.13
IGL01668:Chd9	APN	8	91,753,404 (GRCm39)	missense	possibly damaging	0.53
IGL01873:Chd9	APN	8	91,660,395 (GRCm39)	missense	probably benign	0.00
IGL01969:Chd9	APN	8	91,760,138 (GRCm39)	missense	possibly damaging	0.72
IGL02105:Chd9	APN	8	91,659,116 (GRCm39)	missense	probably damaging	1.00
IGL02153:Chd9	APN	8	91,683,122 (GRCm39)	nonsense	probably null
IGL02164:Chd9	APN	8	91,659,849 (GRCm39)	missense	possibly damaging	0.94
IGL02725:Chd9	APN	8	91,778,312 (GRCm39)	missense	possibly damaging	0.78
IGL02755:Chd9	APN	8	91,760,210 (GRCm39)	missense	probably benign	0.33
IGL02892:Chd9	APN	8	91,703,543 (GRCm39)	splice site	probably benign
IGL02897:Chd9	APN	8	91,660,496 (GRCm39)	splice site	probably benign
IGL03005:Chd9	APN	8	91,738,075 (GRCm39)	missense	probably damaging	0.98
IGL03062:Chd9	APN	8	91,741,895 (GRCm39)	splice site	probably benign
IGL03140:Chd9	APN	8	91,768,856 (GRCm39)	missense	possibly damaging	0.91
hovel	UTSW	8	91,741,832 (GRCm39)	missense	probably benign	0.19
shack	UTSW	8	91,659,426 (GRCm39)	missense	probably damaging	1.00
R0056:Chd9	UTSW	8	91,660,165 (GRCm39)	missense	possibly damaging	0.62
R0157:Chd9	UTSW	8	91,735,464 (GRCm39)	splice site	probably null
R0238:Chd9	UTSW	8	91,659,456 (GRCm39)	missense	probably damaging	1.00
R0238:Chd9	UTSW	8	91,659,456 (GRCm39)	missense	probably damaging	1.00
R0432:Chd9	UTSW	8	91,721,078 (GRCm39)	splice site	probably benign
R0454:Chd9	UTSW	8	91,699,859 (GRCm39)	missense	possibly damaging	0.83
R0573:Chd9	UTSW	8	91,725,223 (GRCm39)	missense	probably damaging	1.00
R0580:Chd9	UTSW	8	91,721,191 (GRCm39)	missense	possibly damaging	0.91
R0604:Chd9	UTSW	8	91,763,170 (GRCm39)	missense	possibly damaging	0.82
R0662:Chd9	UTSW	8	91,704,304 (GRCm39)	missense	probably damaging	0.99
R0825:Chd9	UTSW	8	91,777,825 (GRCm39)	missense	probably benign	0.06
R0945:Chd9	UTSW	8	91,659,630 (GRCm39)	missense	possibly damaging	0.60
R0964:Chd9	UTSW	8	91,741,832 (GRCm39)	missense	probably benign	0.19
R0967:Chd9	UTSW	8	91,716,107 (GRCm39)	missense	probably damaging	1.00
R1015:Chd9	UTSW	8	91,659,206 (GRCm39)	missense	probably damaging	0.99
R1066:Chd9	UTSW	8	91,712,764 (GRCm39)	nonsense	probably null
R1244:Chd9	UTSW	8	91,749,557 (GRCm39)	missense	probably damaging	0.99
R1505:Chd9	UTSW	8	91,733,123 (GRCm39)	splice site	probably null
R1570:Chd9	UTSW	8	91,763,170 (GRCm39)	missense	probably benign	0.03
R1591:Chd9	UTSW	8	91,710,166 (GRCm39)	missense	probably damaging	0.97
R1624:Chd9	UTSW	8	91,725,163 (GRCm39)	missense	probably benign	0.17
R1626:Chd9	UTSW	8	91,721,224 (GRCm39)	missense	probably benign	0.00
R1632:Chd9	UTSW	8	91,683,335 (GRCm39)	nonsense	probably null
R1649:Chd9	UTSW	8	91,659,229 (GRCm39)	missense	possibly damaging	0.88
R1664:Chd9	UTSW	8	91,749,418 (GRCm39)	splice site	probably null
R1668:Chd9	UTSW	8	91,767,814 (GRCm39)	missense	probably damaging	0.99
R1681:Chd9	UTSW	8	91,699,763 (GRCm39)	missense	probably damaging	0.98
R1695:Chd9	UTSW	8	91,728,410 (GRCm39)	missense	probably damaging	1.00
R1714:Chd9	UTSW	8	91,760,853 (GRCm39)	utr 3 prime	probably benign
R1746:Chd9	UTSW	8	91,737,326 (GRCm39)	missense	probably benign	0.01
R1843:Chd9	UTSW	8	91,737,422 (GRCm39)	missense	probably benign	0.19
R1844:Chd9	UTSW	8	91,683,323 (GRCm39)	nonsense	probably null
R1941:Chd9	UTSW	8	91,703,697 (GRCm39)	critical splice donor site	probably null
R2022:Chd9	UTSW	8	91,761,682 (GRCm39)	missense	probably benign	0.17
R2027:Chd9	UTSW	8	91,634,619 (GRCm39)	unclassified	probably benign
R2098:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2099:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2100:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2101:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2224:Chd9	UTSW	8	91,737,913 (GRCm39)	missense	probably benign	0.04
R2276:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2278:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2316:Chd9	UTSW	8	91,777,756 (GRCm39)	missense	probably damaging	0.99
R2507:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2508:Chd9	UTSW	8	91,760,615 (GRCm39)	missense	probably benign	0.01
R2988:Chd9	UTSW	8	91,757,088 (GRCm39)	splice site	probably null
R3418:Chd9	UTSW	8	91,763,219 (GRCm39)	missense	probably damaging	1.00
R3817:Chd9	UTSW	8	91,710,893 (GRCm39)	splice site	probably benign
R3923:Chd9	UTSW	8	91,660,147 (GRCm39)	missense	probably benign	0.16
R4001:Chd9	UTSW	8	91,683,185 (GRCm39)	missense	probably damaging	1.00
R4003:Chd9	UTSW	8	91,683,185 (GRCm39)	missense	probably damaging	1.00
R4006:Chd9	UTSW	8	91,660,188 (GRCm39)	missense	probably benign	0.12
R4013:Chd9	UTSW	8	91,699,797 (GRCm39)	missense	possibly damaging	0.82
R4067:Chd9	UTSW	8	91,750,202 (GRCm39)	missense	possibly damaging	0.53
R4108:Chd9	UTSW	8	91,737,304 (GRCm39)	missense	probably benign	0.04
R4125:Chd9	UTSW	8	91,777,912 (GRCm39)	missense	probably damaging	0.99
R4126:Chd9	UTSW	8	91,777,912 (GRCm39)	missense	probably damaging	0.99
R4452:Chd9	UTSW	8	91,704,308 (GRCm39)	missense	probably damaging	0.99
R4463:Chd9	UTSW	8	91,705,627 (GRCm39)	missense	probably benign	0.01
R4478:Chd9	UTSW	8	91,760,659 (GRCm39)	utr 3 prime	probably benign
R4587:Chd9	UTSW	8	91,763,134 (GRCm39)	missense	possibly damaging	0.95
R4628:Chd9	UTSW	8	91,710,091 (GRCm39)	missense	probably benign	0.05
R4908:Chd9	UTSW	8	91,741,877 (GRCm39)	missense	possibly damaging	0.50
R4912:Chd9	UTSW	8	91,760,858 (GRCm39)	missense	possibly damaging	0.84
R4977:Chd9	UTSW	8	91,760,336 (GRCm39)	missense	possibly damaging	0.96
R5016:Chd9	UTSW	8	91,733,254 (GRCm39)	nonsense	probably null
R5083:Chd9	UTSW	8	91,711,002 (GRCm39)	missense	probably damaging	1.00
R5088:Chd9	UTSW	8	91,704,147 (GRCm39)	missense	possibly damaging	0.94
R5090:Chd9	UTSW	8	91,753,462 (GRCm39)	nonsense	probably null
R5307:Chd9	UTSW	8	91,723,777 (GRCm39)	missense	probably damaging	1.00
R5541:Chd9	UTSW	8	91,778,132 (GRCm39)	missense	probably benign	0.09
R5559:Chd9	UTSW	8	91,742,553 (GRCm39)	critical splice donor site	probably null
R5638:Chd9	UTSW	8	91,738,078 (GRCm39)	missense	possibly damaging	0.67
R5640:Chd9	UTSW	8	91,763,190 (GRCm39)	missense	probably damaging	1.00
R5793:Chd9	UTSW	8	91,728,384 (GRCm39)	missense	probably damaging	1.00
R5827:Chd9	UTSW	8	91,716,078 (GRCm39)	missense	probably damaging	1.00
R5834:Chd9	UTSW	8	91,723,792 (GRCm39)	missense	probably damaging	1.00
R5875:Chd9	UTSW	8	91,778,464 (GRCm39)	missense	probably damaging	0.99
R6002:Chd9	UTSW	8	91,705,515 (GRCm39)	missense	probably damaging	1.00
R6091:Chd9	UTSW	8	91,761,691 (GRCm39)	missense	probably damaging	1.00
R6185:Chd9	UTSW	8	91,775,765 (GRCm39)	missense	probably damaging	1.00
R6246:Chd9	UTSW	8	91,659,045 (GRCm39)	missense	probably damaging	1.00
R6292:Chd9	UTSW	8	91,659,550 (GRCm39)	missense	probably benign	0.05
R6305:Chd9	UTSW	8	91,757,174 (GRCm39)	missense	possibly damaging	0.93
R6348:Chd9	UTSW	8	91,737,903 (GRCm39)	missense	possibly damaging	0.95
R6438:Chd9	UTSW	8	91,725,149 (GRCm39)	missense	probably benign	0.02
R6470:Chd9	UTSW	8	91,659,426 (GRCm39)	missense	probably damaging	1.00
R6798:Chd9	UTSW	8	91,778,182 (GRCm39)	missense	possibly damaging	0.56
R6902:Chd9	UTSW	8	91,769,579 (GRCm39)	missense	probably damaging	1.00
R6908:Chd9	UTSW	8	91,683,044 (GRCm39)	missense	probably benign	0.02
R6929:Chd9	UTSW	8	91,769,573 (GRCm39)	missense	probably damaging	1.00
R6969:Chd9	UTSW	8	91,705,542 (GRCm39)	missense	probably benign	0.34
R7043:Chd9	UTSW	8	91,760,843 (GRCm39)	utr 3 prime	probably benign
R7094:Chd9	UTSW	8	91,716,189 (GRCm39)	missense	unknown
R7126:Chd9	UTSW	8	91,741,853 (GRCm39)	missense	unknown
R7182:Chd9	UTSW	8	91,733,250 (GRCm39)	missense	unknown
R7219:Chd9	UTSW	8	91,728,394 (GRCm39)	missense	unknown
R7260:Chd9	UTSW	8	91,721,171 (GRCm39)	missense	unknown
R7293:Chd9	UTSW	8	91,760,707 (GRCm39)	missense	unknown
R7303:Chd9	UTSW	8	91,778,532 (GRCm39)	missense	unknown
R7358:Chd9	UTSW	8	91,760,846 (GRCm39)	missense	unknown
R7358:Chd9	UTSW	8	91,710,115 (GRCm39)	missense	unknown
R7451:Chd9	UTSW	8	91,760,446 (GRCm39)	missense	probably benign	0.27
R7451:Chd9	UTSW	8	91,760,418 (GRCm39)	frame shift	probably null
R7456:Chd9	UTSW	8	91,659,153 (GRCm39)	nonsense	probably null
R7481:Chd9	UTSW	8	91,683,066 (GRCm39)	missense	unknown
R7532:Chd9	UTSW	8	91,721,193 (GRCm39)	missense	unknown
R7570:Chd9	UTSW	8	91,721,208 (GRCm39)	missense	unknown
R7611:Chd9	UTSW	8	91,763,017 (GRCm39)	missense	probably damaging	1.00
R7673:Chd9	UTSW	8	91,778,325 (GRCm39)	missense	probably damaging	0.96
R7723:Chd9	UTSW	8	91,741,837 (GRCm39)	missense	unknown
R7739:Chd9	UTSW	8	91,761,653 (GRCm39)	missense	probably damaging	1.00
R7759:Chd9	UTSW	8	91,704,178 (GRCm39)	critical splice donor site	probably null
R7916:Chd9	UTSW	8	91,761,684 (GRCm39)	nonsense	probably null
R7921:Chd9	UTSW	8	91,768,909 (GRCm39)	critical splice donor site	probably null
R7957:Chd9	UTSW	8	91,778,326 (GRCm39)	missense	probably damaging	0.99
R7972:Chd9	UTSW	8	91,732,395 (GRCm39)	missense	unknown
R8108:Chd9	UTSW	8	91,659,852 (GRCm39)	missense	unknown
R8115:Chd9	UTSW	8	91,762,960 (GRCm39)	missense	probably damaging	0.99
R8165:Chd9	UTSW	8	91,767,769 (GRCm39)	missense	probably damaging	1.00
R8171:Chd9	UTSW	8	91,752,015 (GRCm39)	missense	possibly damaging	0.92
R8186:Chd9	UTSW	8	91,725,233 (GRCm39)	missense	unknown
R8208:Chd9	UTSW	8	91,763,891 (GRCm39)	splice site	probably null
R8256:Chd9	UTSW	8	91,660,129 (GRCm39)	missense	unknown
R8281:Chd9	UTSW	8	91,763,225 (GRCm39)	missense	probably damaging	1.00
R8504:Chd9	UTSW	8	91,723,472 (GRCm39)	missense	unknown
R8836:Chd9	UTSW	8	91,767,812 (GRCm39)	missense	probably damaging	0.99
R8892:Chd9	UTSW	8	91,660,468 (GRCm39)	missense	unknown
R8985:Chd9	UTSW	8	91,721,101 (GRCm39)	missense	unknown
R9029:Chd9	UTSW	8	91,683,198 (GRCm39)	missense	unknown
R9030:Chd9	UTSW	8	91,683,198 (GRCm39)	missense	unknown
R9038:Chd9	UTSW	8	91,716,233 (GRCm39)	missense	unknown
R9081:Chd9	UTSW	8	91,704,144 (GRCm39)	nonsense	probably null
R9134:Chd9	UTSW	8	91,659,754 (GRCm39)	missense	unknown
R9205:Chd9	UTSW	8	91,757,270 (GRCm39)	missense	probably benign	0.01
R9309:Chd9	UTSW	8	91,733,319 (GRCm39)	missense	unknown
R9375:Chd9	UTSW	8	91,725,335 (GRCm39)	critical splice donor site	probably null
R9449:Chd9	UTSW	8	91,659,174 (GRCm39)	missense	unknown
R9547:Chd9	UTSW	8	91,683,186 (GRCm39)	missense	unknown
R9573:Chd9	UTSW	8	91,704,302 (GRCm39)	missense	unknown
R9576:Chd9	UTSW	8	91,659,294 (GRCm39)	missense	unknown
R9601:Chd9	UTSW	8	91,732,360 (GRCm39)	nonsense	probably null
R9613:Chd9	UTSW	8	91,683,150 (GRCm39)	nonsense	probably null
R9639:Chd9	UTSW	8	91,760,840 (GRCm39)	missense	probably null
R9718:Chd9	UTSW	8	91,712,801 (GRCm39)	missense	unknown
R9746:Chd9	UTSW	8	91,738,063 (GRCm39)	missense	unknown
R9762:Chd9	UTSW	8	91,712,741 (GRCm39)	missense	unknown
R9764:Chd9	UTSW	8	91,721,220 (GRCm39)	missense	unknown
R9790:Chd9	UTSW	8	91,760,417 (GRCm39)	missense	possibly damaging	0.82
R9791:Chd9	UTSW	8	91,760,417 (GRCm39)	missense	possibly damaging	0.82
RF007:Chd9	UTSW	8	91,760,578 (GRCm39)	missense	possibly damaging	0.66
X0065:Chd9	UTSW	8	91,763,200 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AATCAGAGTAAGGCGGCTCAC -3'
(R):5'- TCAGAATCAGAGCTGGACTGG -3'

Sequencing Primer
(F):5'- GGCTCACTCAAGGACTTCTG -3'
(R):5'- ATCAGAGCTGGACTGGGATCC -3'

Posted On

2015-10-08