Mutagenetix > Incidental Mutation

Incidental Mutation 'R4659:Chrm5'

352653

Institutional Source

Beutler Lab

Gene Symbol

Chrm5

Ensembl Gene

ENSMUSG00000074939

Gene Name

cholinergic receptor, muscarinic 5

Synonyms

muscarinic acetylcholine receptor 5, M5R

MMRRC Submission

041919-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.091) question?

Stock #

R4659 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

112309516-112311114 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 112310102 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Serine at position 338 (N338S)

Ref Sequence

ENSEMBL: ENSMUSP00000097185 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099589]

AlphaFold

Q920H4

Predicted Effect

probably benign
Transcript: ENSMUST00000099589
AA Change: N338S

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000097185
Gene: ENSMUSG00000074939
AA Change: N338S

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	38	242	2.3e-8	PFAM
Pfam:7TM_GPCR_Srsx	41	253	7.5e-8	PFAM
Pfam:7tm_1	47	495	1.5e-79	PFAM
low complexity region	507	518	N/A	INTRINSIC

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.3%
20x: 95.4%

Validation Efficiency

96% (74/77)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The muscarinic cholinergic receptors belong to a larger family of G protein-coupled receptors. The functional diversity of these receptors is defined by the binding of acetylcholine and includes cellular responses such as adenylate cyclase inhibition, phosphoinositide degeneration, and potassium channel mediation. Muscarinic receptors influence many effects of acetylcholine in the central and peripheral nervous system. The clinical implications of this receptor are unknown; however, stimulation of this receptor is known to increase cyclic AMP levels. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for a targeted null allele exhibit loss of acetylcholine-induced dilation of cerebral arteries, decreased pilocarpine-induced salivation, increased water-deprivation induced drinking, and attenuated morphine reinforcement and withdrawal. [provided by MGI curators]

Allele List at MGI

All alleles(3) : Targeted, knock-out(3)

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc9	C	A	6: 142,618,321 (GRCm39)		probably null	Het
Ankrd22	C	T	19: 34,102,968 (GRCm39)	V118I	probably damaging	Het
Aoc1	A	T	6: 48,883,010 (GRCm39)	E295D	probably benign	Het
Arap2	T	C	5: 62,811,469 (GRCm39)	N1114S	possibly damaging	Het
AU021092	C	G	16: 5,030,011 (GRCm39)	A335P	probably damaging	Het
Carhsp1	T	C	16: 8,482,129 (GRCm39)	T51A	probably benign	Het
Cdc42bpb	T	C	12: 111,306,325 (GRCm39)	D152G	probably damaging	Het
Cep70	T	A	9: 99,178,394 (GRCm39)	D497E	possibly damaging	Het
Cldn8	G	A	16: 88,359,296 (GRCm39)	H210Y	probably benign	Het
Clhc1	T	A	11: 29,528,229 (GRCm39)	*586K	probably null	Het
Cplane1	G	T	15: 8,245,760 (GRCm39)		probably benign	Het
Dop1a	T	A	9: 86,384,085 (GRCm39)		probably benign	Het
Dync1h1	T	C	12: 110,595,201 (GRCm39)	F1371S	possibly damaging	Het
Eif6	A	G	2: 155,668,101 (GRCm39)	I46T	probably damaging	Het
Esco2	G	A	14: 66,064,035 (GRCm39)	T383M	possibly damaging	Het
Exoc8	T	C	8: 125,624,271 (GRCm39)	D32G	probably damaging	Het
Fam149b	G	T	14: 20,417,941 (GRCm39)	S216I	probably benign	Het
Fam219a	T	C	4: 41,521,645 (GRCm39)	D87G	probably null	Het
Fbxw26	A	T	9: 109,573,939 (GRCm39)	V71D	probably damaging	Het
Gabra4	T	A	5: 71,798,487 (GRCm39)	K164M	probably damaging	Het
Gm57858	T	C	3: 36,080,103 (GRCm39)	D218G	possibly damaging	Het
Gm8603	G	A	17: 13,737,290 (GRCm39)		noncoding transcript	Het
Gnmt	A	G	17: 47,036,892 (GRCm39)	F239S	probably damaging	Het
Gpsm1	G	A	2: 26,209,843 (GRCm39)		probably benign	Het
Jam2	G	A	16: 84,609,840 (GRCm39)	V151M	probably damaging	Het
Kcnj1	A	T	9: 32,305,444 (GRCm39)	D2V	probably benign	Het
Limch1	C	T	5: 67,184,900 (GRCm39)	R797C	probably damaging	Het
Lrrc9	T	A	12: 72,517,038 (GRCm39)	F597I	probably damaging	Het
Lrriq3	T	A	3: 154,835,090 (GRCm39)	I275N	possibly damaging	Het
Mcoln1	T	A	8: 3,560,840 (GRCm39)	S387R	probably damaging	Het
Mgst3	T	A	1: 167,204,848 (GRCm39)	Q58L	probably damaging	Het
Mical1	G	A	10: 41,362,932 (GRCm39)		probably benign	Het
Mmp3	C	A	9: 7,453,673 (GRCm39)	D431E	probably benign	Het
Mx1	T	C	16: 97,256,439 (GRCm39)		probably null	Het
Myo7a	A	G	7: 97,734,673 (GRCm39)	L607P	probably damaging	Het
Myt1l	A	G	12: 29,899,456 (GRCm39)	N153D	probably damaging	Het
Nfu1	A	T	6: 86,996,408 (GRCm39)	T120S	probably damaging	Het
Nhlrc2	T	C	19: 56,564,699 (GRCm39)	V341A	possibly damaging	Het
Notch1	T	C	2: 26,360,901 (GRCm39)	E1148G	probably damaging	Het
Nqo1	C	T	8: 108,117,676 (GRCm39)		probably null	Het
Nwd1	T	A	8: 73,421,949 (GRCm39)	D998E	probably benign	Het
Or8k18	G	A	2: 86,085,357 (GRCm39)	Q227*	probably null	Het
Oxct2a	T	C	4: 123,216,473 (GRCm39)	I303V	probably benign	Het
Parp10	A	T	15: 76,127,185 (GRCm39)	D58E	probably damaging	Het
Pcdha6	T	A	18: 37,102,292 (GRCm39)	V495E	probably damaging	Het
Pitrm1	T	A	13: 6,603,218 (GRCm39)	S88R	probably benign	Het
Pxdn	T	C	12: 30,044,552 (GRCm39)	V510A	probably benign	Het
Ranbp17	T	A	11: 33,216,288 (GRCm39)	D820V	probably damaging	Het
Sec24c	G	T	14: 20,733,212 (GRCm39)	G180C	probably damaging	Het
Serpina3n	T	C	12: 104,379,752 (GRCm39)	S382P	probably benign	Het
Sestd1	A	T	2: 77,042,843 (GRCm39)	M237K	probably null	Het
Sf3a2	T	C	10: 80,639,418 (GRCm39)	I136T	probably damaging	Het
Sh3tc2	A	G	18: 62,107,580 (GRCm39)	Y197C	probably benign	Het
Speer4b	T	C	5: 27,702,893 (GRCm39)	K204E	probably benign	Het
Speer4f1	A	C	5: 17,681,221 (GRCm39)	E33A	possibly damaging	Het
Sspo	T	A	6: 48,461,147 (GRCm39)	D3529E	probably damaging	Het
Stard13	T	C	5: 150,986,253 (GRCm39)	D419G	probably benign	Het
Tg	A	G	15: 66,545,769 (GRCm39)	S164G	possibly damaging	Het
Thap12	A	G	7: 98,359,298 (GRCm39)		probably benign	Het
Thsd1	C	A	8: 22,749,314 (GRCm39)	Y667*	probably null	Het
Tnks	A	C	8: 35,316,465 (GRCm39)	Y885D	possibly damaging	Het
Ttll3	A	G	6: 113,391,102 (GRCm39)	I896V	probably benign	Het
Txnip	T	G	3: 96,466,743 (GRCm39)	F190C	probably damaging	Het
Urb1	T	C	16: 90,573,017 (GRCm39)	D1005G	probably damaging	Het
Usp3	T	C	9: 66,434,352 (GRCm39)		probably null	Het
Usp54	G	T	14: 20,615,060 (GRCm39)	Q794K	probably damaging	Het
Xrn2	A	G	2: 146,903,394 (GRCm39)	Q798R	probably benign	Het
Zfp189	A	G	4: 49,530,342 (GRCm39)	I482V	probably benign	Het
Zfp28	A	G	7: 6,396,506 (GRCm39)	N314D	probably benign	Het
Zmym4	A	G	4: 126,842,221 (GRCm39)		probably null	Het

Other mutations in Chrm5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01532:Chrm5	APN	2	112,309,577 (GRCm39)	missense	probably benign
IGL01611:Chrm5	APN	2	112,310,651 (GRCm39)	nonsense	probably null
IGL02152:Chrm5	APN	2	112,310,913 (GRCm39)	missense	probably damaging	1.00
IGL03002:Chrm5	APN	2	112,310,706 (GRCm39)	missense	probably damaging	1.00
C9142:Chrm5	UTSW	2	112,310,556 (GRCm39)	missense	probably damaging	1.00
R0200:Chrm5	UTSW	2	112,311,065 (GRCm39)	missense	probably benign
R0432:Chrm5	UTSW	2	112,310,000 (GRCm39)	missense	possibly damaging	0.76
R1158:Chrm5	UTSW	2	112,310,214 (GRCm39)	missense	probably benign	0.00
R1611:Chrm5	UTSW	2	112,309,532 (GRCm39)	missense	possibly damaging	0.74
R1621:Chrm5	UTSW	2	112,310,182 (GRCm39)	missense	probably benign	0.00
R1693:Chrm5	UTSW	2	112,309,625 (GRCm39)	missense	probably damaging	1.00
R1988:Chrm5	UTSW	2	112,310,597 (GRCm39)	missense	probably damaging	0.99
R1989:Chrm5	UTSW	2	112,310,597 (GRCm39)	missense	probably damaging	0.99
R2071:Chrm5	UTSW	2	112,309,572 (GRCm39)	missense	probably null	0.93
R2890:Chrm5	UTSW	2	112,310,048 (GRCm39)	missense	probably benign	0.00
R4785:Chrm5	UTSW	2	112,309,930 (GRCm39)	missense	probably benign	0.25
R5196:Chrm5	UTSW	2	112,310,729 (GRCm39)	missense	probably damaging	1.00
R5734:Chrm5	UTSW	2	112,310,445 (GRCm39)	missense	probably benign	0.28
R6343:Chrm5	UTSW	2	112,309,793 (GRCm39)	missense	probably damaging	1.00
R6499:Chrm5	UTSW	2	112,310,825 (GRCm39)	missense	probably benign
R6672:Chrm5	UTSW	2	112,310,141 (GRCm39)	missense	probably benign
R6905:Chrm5	UTSW	2	112,309,901 (GRCm39)	missense	probably benign	0.00
R7192:Chrm5	UTSW	2	112,310,672 (GRCm39)	missense	probably damaging	0.97
R7775:Chrm5	UTSW	2	112,310,301 (GRCm39)	missense	probably benign	0.07
R7778:Chrm5	UTSW	2	112,310,301 (GRCm39)	missense	probably benign	0.07
R8780:Chrm5	UTSW	2	112,310,453 (GRCm39)	missense	possibly damaging	0.64
R9287:Chrm5	UTSW	2	112,309,610 (GRCm39)	missense	probably damaging	1.00
R9436:Chrm5	UTSW	2	112,309,824 (GRCm39)	missense	possibly damaging	0.69
R9502:Chrm5	UTSW	2	112,311,040 (GRCm39)	missense	probably damaging	1.00
X0023:Chrm5	UTSW	2	112,310,826 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- ACAGGGCATGATTTTCACCTTAC -3'
(R):5'- TCATCCTCCCGTAGAAGCAC -3'

Sequencing Primer
(F):5'- GGGCATGATTTTCACCTTACGACAG -3'
(R):5'- GTAGAAGCACCTCAACAACGGG -3'

Posted On

2015-10-08