Incidental Mutation 'R4717:Jmjd1c'
ID |
354142 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Jmjd1c
|
Ensembl Gene |
ENSMUSG00000037876 |
Gene Name |
jumonji domain containing 1C |
Synonyms |
D630035I23Rik, TRIP8, 5430433L24Rik |
MMRRC Submission |
041984-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.655)
|
Stock # |
R4717 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
10 |
Chromosomal Location |
66932189-67092105 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
C to T
at 66993830 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Stop codon
at position 104
(Q104*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000134551
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051446]
[ENSMUST00000174317]
[ENSMUST00000174408]
|
AlphaFold |
Q69ZK6 |
Predicted Effect |
probably null
Transcript: ENSMUST00000051446
AA Change: Q104*
|
SMART Domains |
Protein: ENSMUSP00000056227 Gene: ENSMUSG00000037876 AA Change: Q104*
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2236 |
N/A |
BLAST |
JmjC
|
2264 |
2488 |
3.29e-53 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000173295
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000174062
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000174317
|
SMART Domains |
Protein: ENSMUSP00000134246 Gene: ENSMUSG00000037876
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
1 |
744 |
N/A |
BLAST |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000174408
AA Change: Q104*
|
SMART Domains |
Protein: ENSMUSP00000134551 Gene: ENSMUSG00000037876 AA Change: Q104*
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2237 |
N/A |
BLAST |
JmjC
|
2265 |
2489 |
3.29e-53 |
SMART |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.2%
- 20x: 95.1%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene interacts with thyroid hormone receptors and contains a jumonji domain. It is a candidate histone demethylase and is thought to be a coactivator for key transcription factors. It plays a role in the DNA-damage response pathway by demethylating the mediator of DNA damage checkpoint 1 (MDC1) protein, and is required for the survival of acute myeloid leukemia. Mutations in this gene are associated with Rett syndrome and intellectual disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015] PHENOTYPE: Mice homozygous for a null allele exhibit an age-dependent male infertility phenotype, characterized by early loss of undifferentiated spermatogonia, and a progressive reduction in testis size/weight and male germ cells, partly due to increased male germ cell apoptosis. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 86 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
9330159F19Rik |
T |
C |
10: 29,097,783 (GRCm39) |
L60P |
probably damaging |
Het |
Acsf2 |
T |
G |
11: 94,450,372 (GRCm39) |
M512L |
probably benign |
Het |
Ahrr |
T |
A |
13: 74,363,885 (GRCm39) |
H312L |
probably benign |
Het |
Akr1c18 |
T |
C |
13: 4,186,717 (GRCm39) |
M244V |
probably benign |
Het |
Aldh3b2 |
A |
G |
19: 4,031,128 (GRCm39) |
Y459C |
probably damaging |
Het |
Arhgap29 |
A |
T |
3: 121,803,607 (GRCm39) |
I796L |
possibly damaging |
Het |
Arrdc4 |
T |
A |
7: 68,391,406 (GRCm39) |
D287V |
probably damaging |
Het |
Astn2 |
A |
T |
4: 65,562,991 (GRCm39) |
I930N |
possibly damaging |
Het |
Bace2 |
T |
A |
16: 97,238,073 (GRCm39) |
L508Q |
probably damaging |
Het |
Baz2a |
G |
T |
10: 127,960,811 (GRCm39) |
C1537F |
possibly damaging |
Het |
Cad |
A |
G |
5: 31,224,030 (GRCm39) |
|
probably null |
Het |
Capn5 |
A |
T |
7: 97,773,126 (GRCm39) |
I626N |
probably benign |
Het |
Car8 |
A |
T |
4: 8,169,685 (GRCm39) |
N274K |
probably damaging |
Het |
Casp14 |
T |
C |
10: 78,550,958 (GRCm39) |
I76V |
probably benign |
Het |
Ccdc88c |
A |
G |
12: 100,882,925 (GRCm39) |
V1649A |
probably benign |
Het |
Cemip |
A |
T |
7: 83,596,488 (GRCm39) |
I1092N |
probably damaging |
Het |
Clspn |
A |
G |
4: 126,453,849 (GRCm39) |
N91D |
probably damaging |
Het |
Cpxm2 |
A |
G |
7: 131,656,574 (GRCm39) |
Y563H |
possibly damaging |
Het |
Csnk1g2 |
T |
C |
10: 80,473,749 (GRCm39) |
V72A |
probably benign |
Het |
Cyp46a1 |
T |
C |
12: 108,318,285 (GRCm39) |
|
probably null |
Het |
Cyp4x1 |
T |
C |
4: 114,978,902 (GRCm39) |
H206R |
probably benign |
Het |
Dapk1 |
T |
A |
13: 60,874,476 (GRCm39) |
|
probably null |
Het |
Ddx1 |
A |
G |
12: 13,290,888 (GRCm39) |
W76R |
probably damaging |
Het |
Dhx29 |
G |
A |
13: 113,083,469 (GRCm39) |
R508H |
unknown |
Het |
Dnah2 |
T |
C |
11: 69,320,183 (GRCm39) |
D3962G |
probably benign |
Het |
Dnajc14 |
T |
A |
10: 128,642,113 (GRCm39) |
C12S |
possibly damaging |
Het |
Dock1 |
T |
C |
7: 134,449,899 (GRCm39) |
I804T |
probably damaging |
Het |
Efs |
G |
T |
14: 55,157,801 (GRCm39) |
S170Y |
probably damaging |
Het |
Eml4 |
G |
T |
17: 83,755,654 (GRCm39) |
W295C |
probably benign |
Het |
Fkbp15 |
A |
G |
4: 62,226,306 (GRCm39) |
S748P |
probably damaging |
Het |
Ghr |
T |
G |
15: 3,349,235 (GRCm39) |
I648L |
possibly damaging |
Het |
Gigyf1 |
T |
A |
5: 137,523,494 (GRCm39) |
I942N |
probably damaging |
Het |
Gpam |
T |
A |
19: 55,064,046 (GRCm39) |
E682D |
probably benign |
Het |
Gsr |
A |
T |
8: 34,183,886 (GRCm39) |
K383* |
probably null |
Het |
Hapln1 |
C |
A |
13: 89,753,579 (GRCm39) |
S248R |
probably benign |
Het |
Haus2 |
G |
T |
2: 120,449,583 (GRCm39) |
R209L |
probably benign |
Het |
Hhatl |
A |
G |
9: 121,618,943 (GRCm39) |
F63S |
probably damaging |
Het |
Hmcn1 |
A |
G |
1: 150,494,816 (GRCm39) |
M4091T |
probably benign |
Het |
Hspb7 |
A |
G |
4: 141,149,896 (GRCm39) |
D94G |
probably damaging |
Het |
Irf6 |
T |
A |
1: 192,849,742 (GRCm39) |
|
probably null |
Het |
Itgb2 |
T |
A |
10: 77,381,878 (GRCm39) |
L60* |
probably null |
Het |
Kcnh1 |
A |
G |
1: 191,959,025 (GRCm39) |
D193G |
probably damaging |
Het |
Klhl25 |
G |
T |
7: 75,516,528 (GRCm39) |
C478F |
probably damaging |
Het |
Klhl3 |
T |
C |
13: 58,178,330 (GRCm39) |
D267G |
probably damaging |
Het |
L3mbtl4 |
T |
G |
17: 68,762,708 (GRCm39) |
H80Q |
probably null |
Het |
Lhcgr |
C |
A |
17: 89,049,895 (GRCm39) |
V544F |
probably benign |
Het |
Mfsd4a |
T |
C |
1: 131,985,633 (GRCm39) |
N168D |
probably benign |
Het |
Mmp3 |
A |
G |
9: 7,449,881 (GRCm39) |
Q255R |
possibly damaging |
Het |
Mrgprb3 |
C |
A |
7: 48,293,000 (GRCm39) |
G184C |
probably benign |
Het |
Mtpap |
C |
T |
18: 4,396,394 (GRCm39) |
A562V |
possibly damaging |
Het |
Nid1 |
T |
C |
13: 13,681,086 (GRCm39) |
V1072A |
probably benign |
Het |
Nsf |
T |
G |
11: 103,714,595 (GRCm39) |
K728T |
probably damaging |
Het |
Or10ak7 |
T |
C |
4: 118,791,626 (GRCm39) |
N140D |
probably benign |
Het |
Or12j3 |
T |
C |
7: 139,953,328 (GRCm39) |
N65S |
probably damaging |
Het |
Or1e17 |
T |
A |
11: 73,831,641 (GRCm39) |
S190T |
possibly damaging |
Het |
Or2a5 |
T |
C |
6: 42,874,158 (GRCm39) |
Y258H |
probably damaging |
Het |
Or4k15b |
A |
T |
14: 50,272,821 (GRCm39) |
V13E |
probably damaging |
Het |
Pcsk5 |
A |
T |
19: 17,502,631 (GRCm39) |
C894S |
probably damaging |
Het |
Pde2a |
A |
G |
7: 101,143,879 (GRCm39) |
D166G |
probably benign |
Het |
Pfpl |
G |
A |
19: 12,406,618 (GRCm39) |
E290K |
probably benign |
Het |
Pi4kb |
A |
C |
3: 94,906,162 (GRCm39) |
I570L |
probably damaging |
Het |
Plxnb2 |
A |
T |
15: 89,041,622 (GRCm39) |
C1727* |
probably null |
Het |
Poln |
A |
T |
5: 34,286,792 (GRCm39) |
D125E |
possibly damaging |
Het |
Pomgnt1 |
A |
G |
4: 116,011,412 (GRCm39) |
D259G |
possibly damaging |
Het |
Prx |
A |
T |
7: 27,216,152 (GRCm39) |
M218L |
probably benign |
Het |
Pxn |
A |
T |
5: 115,690,001 (GRCm39) |
Q342L |
probably damaging |
Het |
Rhpn2 |
A |
G |
7: 35,033,775 (GRCm39) |
D3G |
possibly damaging |
Het |
Rnase2b |
C |
T |
14: 51,400,174 (GRCm39) |
T85I |
possibly damaging |
Het |
Rnaseh2b |
C |
A |
14: 62,591,075 (GRCm39) |
T142K |
probably damaging |
Het |
Sacs |
T |
C |
14: 61,450,304 (GRCm39) |
S4117P |
probably damaging |
Het |
Sdk2 |
T |
C |
11: 113,745,195 (GRCm39) |
N700S |
probably damaging |
Het |
Sec62 |
A |
C |
3: 30,864,020 (GRCm39) |
K101Q |
unknown |
Het |
Sel1l2 |
A |
C |
2: 140,071,943 (GRCm39) |
L659R |
possibly damaging |
Het |
Septin11 |
A |
G |
5: 93,304,815 (GRCm39) |
I211V |
possibly damaging |
Het |
Slc25a42 |
C |
T |
8: 70,642,107 (GRCm39) |
E112K |
probably damaging |
Het |
Spem2 |
T |
C |
11: 69,708,609 (GRCm39) |
N119D |
probably benign |
Het |
Themis |
G |
A |
10: 28,665,748 (GRCm39) |
E604K |
probably benign |
Het |
Tie1 |
T |
C |
4: 118,343,414 (GRCm39) |
K150E |
probably damaging |
Het |
Top6bl |
A |
G |
19: 4,675,901 (GRCm39) |
|
probably benign |
Het |
Ubap2 |
G |
A |
4: 41,218,333 (GRCm39) |
T258I |
possibly damaging |
Het |
Ushbp1 |
C |
T |
8: 71,838,313 (GRCm39) |
A664T |
probably damaging |
Het |
Vmn1r1 |
T |
C |
1: 181,984,774 (GRCm39) |
N297S |
possibly damaging |
Het |
Vmn1r173 |
A |
C |
7: 23,402,637 (GRCm39) |
I291L |
probably damaging |
Het |
Yy1 |
A |
G |
12: 108,759,972 (GRCm39) |
I212V |
possibly damaging |
Het |
Zfp442 |
A |
T |
2: 150,250,149 (GRCm39) |
F527L |
probably damaging |
Het |
Zyg11b |
T |
A |
4: 108,099,069 (GRCm39) |
H632L |
probably damaging |
Het |
|
Other mutations in Jmjd1c |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01062:Jmjd1c
|
APN |
10 |
67,062,494 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01604:Jmjd1c
|
APN |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01753:Jmjd1c
|
APN |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02081:Jmjd1c
|
APN |
10 |
67,055,305 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02128:Jmjd1c
|
APN |
10 |
67,079,648 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02134:Jmjd1c
|
APN |
10 |
67,056,171 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL02215:Jmjd1c
|
APN |
10 |
67,056,101 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02408:Jmjd1c
|
APN |
10 |
67,062,161 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02502:Jmjd1c
|
APN |
10 |
67,061,640 (GRCm39) |
missense |
probably benign |
0.13 |
IGL02546:Jmjd1c
|
APN |
10 |
67,061,115 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02943:Jmjd1c
|
APN |
10 |
67,055,433 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03171:Jmjd1c
|
APN |
10 |
67,061,277 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL03261:Jmjd1c
|
APN |
10 |
67,067,849 (GRCm39) |
missense |
probably damaging |
0.99 |
Accordion
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
PIT4378001:Jmjd1c
|
UTSW |
10 |
67,065,692 (GRCm39) |
missense |
probably damaging |
1.00 |
R0126:Jmjd1c
|
UTSW |
10 |
67,055,105 (GRCm39) |
missense |
probably damaging |
0.98 |
R0133:Jmjd1c
|
UTSW |
10 |
67,076,587 (GRCm39) |
missense |
probably benign |
0.22 |
R0201:Jmjd1c
|
UTSW |
10 |
67,054,888 (GRCm39) |
missense |
unknown |
|
R0396:Jmjd1c
|
UTSW |
10 |
67,055,302 (GRCm39) |
missense |
possibly damaging |
0.82 |
R0401:Jmjd1c
|
UTSW |
10 |
67,056,161 (GRCm39) |
missense |
probably damaging |
1.00 |
R0452:Jmjd1c
|
UTSW |
10 |
67,091,261 (GRCm39) |
missense |
probably benign |
0.28 |
R0488:Jmjd1c
|
UTSW |
10 |
67,076,506 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Jmjd1c
|
UTSW |
10 |
67,061,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R0555:Jmjd1c
|
UTSW |
10 |
67,061,568 (GRCm39) |
missense |
probably benign |
0.01 |
R0673:Jmjd1c
|
UTSW |
10 |
67,062,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R0718:Jmjd1c
|
UTSW |
10 |
67,054,725 (GRCm39) |
splice site |
probably null |
|
R0755:Jmjd1c
|
UTSW |
10 |
66,932,378 (GRCm39) |
intron |
probably benign |
|
R1142:Jmjd1c
|
UTSW |
10 |
67,061,124 (GRCm39) |
missense |
probably damaging |
1.00 |
R1196:Jmjd1c
|
UTSW |
10 |
67,075,015 (GRCm39) |
splice site |
probably benign |
|
R1413:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R1619:Jmjd1c
|
UTSW |
10 |
67,055,654 (GRCm39) |
missense |
probably benign |
0.25 |
R1676:Jmjd1c
|
UTSW |
10 |
67,060,588 (GRCm39) |
missense |
probably benign |
0.02 |
R1751:Jmjd1c
|
UTSW |
10 |
67,061,469 (GRCm39) |
missense |
probably benign |
|
R1950:Jmjd1c
|
UTSW |
10 |
67,075,701 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1968:Jmjd1c
|
UTSW |
10 |
67,061,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R2049:Jmjd1c
|
UTSW |
10 |
66,993,777 (GRCm39) |
nonsense |
probably null |
|
R2061:Jmjd1c
|
UTSW |
10 |
67,054,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R2202:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2203:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2256:Jmjd1c
|
UTSW |
10 |
67,061,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R2312:Jmjd1c
|
UTSW |
10 |
67,074,629 (GRCm39) |
missense |
probably damaging |
0.98 |
R2349:Jmjd1c
|
UTSW |
10 |
67,091,279 (GRCm39) |
missense |
probably benign |
|
R2392:Jmjd1c
|
UTSW |
10 |
67,065,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R3015:Jmjd1c
|
UTSW |
10 |
66,993,711 (GRCm39) |
missense |
probably damaging |
1.00 |
R3110:Jmjd1c
|
UTSW |
10 |
67,075,863 (GRCm39) |
splice site |
probably benign |
|
R4043:Jmjd1c
|
UTSW |
10 |
67,055,245 (GRCm39) |
missense |
possibly damaging |
0.55 |
R4097:Jmjd1c
|
UTSW |
10 |
67,054,787 (GRCm39) |
missense |
probably benign |
0.09 |
R4118:Jmjd1c
|
UTSW |
10 |
67,055,532 (GRCm39) |
missense |
probably damaging |
0.96 |
R4193:Jmjd1c
|
UTSW |
10 |
66,932,460 (GRCm39) |
intron |
probably benign |
|
R4352:Jmjd1c
|
UTSW |
10 |
67,080,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R4577:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R4630:Jmjd1c
|
UTSW |
10 |
66,993,753 (GRCm39) |
nonsense |
probably null |
|
R4741:Jmjd1c
|
UTSW |
10 |
67,060,718 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4774:Jmjd1c
|
UTSW |
10 |
67,060,571 (GRCm39) |
missense |
possibly damaging |
0.45 |
R4836:Jmjd1c
|
UTSW |
10 |
67,069,225 (GRCm39) |
missense |
probably benign |
0.21 |
R4914:Jmjd1c
|
UTSW |
10 |
67,054,750 (GRCm39) |
missense |
probably damaging |
1.00 |
R4939:Jmjd1c
|
UTSW |
10 |
67,081,916 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5211:Jmjd1c
|
UTSW |
10 |
67,067,795 (GRCm39) |
missense |
probably damaging |
1.00 |
R5215:Jmjd1c
|
UTSW |
10 |
67,076,480 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5514:Jmjd1c
|
UTSW |
10 |
67,053,928 (GRCm39) |
missense |
probably damaging |
1.00 |
R5530:Jmjd1c
|
UTSW |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
R5624:Jmjd1c
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
R5640:Jmjd1c
|
UTSW |
10 |
67,061,857 (GRCm39) |
missense |
probably benign |
0.10 |
R5654:Jmjd1c
|
UTSW |
10 |
67,065,785 (GRCm39) |
missense |
probably benign |
0.10 |
R5742:Jmjd1c
|
UTSW |
10 |
67,056,112 (GRCm39) |
missense |
probably benign |
0.02 |
R5764:Jmjd1c
|
UTSW |
10 |
67,062,291 (GRCm39) |
missense |
probably damaging |
1.00 |
R6118:Jmjd1c
|
UTSW |
10 |
67,075,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R6163:Jmjd1c
|
UTSW |
10 |
67,083,827 (GRCm39) |
missense |
possibly damaging |
0.46 |
R6256:Jmjd1c
|
UTSW |
10 |
67,056,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R6266:Jmjd1c
|
UTSW |
10 |
67,085,439 (GRCm39) |
missense |
probably damaging |
0.96 |
R6358:Jmjd1c
|
UTSW |
10 |
67,061,718 (GRCm39) |
missense |
probably benign |
|
R6430:Jmjd1c
|
UTSW |
10 |
67,059,939 (GRCm39) |
missense |
possibly damaging |
0.87 |
R6455:Jmjd1c
|
UTSW |
10 |
67,061,795 (GRCm39) |
missense |
probably benign |
0.10 |
R6887:Jmjd1c
|
UTSW |
10 |
67,025,599 (GRCm39) |
missense |
possibly damaging |
0.74 |
R6895:Jmjd1c
|
UTSW |
10 |
67,052,869 (GRCm39) |
missense |
probably benign |
0.00 |
R7041:Jmjd1c
|
UTSW |
10 |
67,056,388 (GRCm39) |
missense |
possibly damaging |
0.90 |
R7095:Jmjd1c
|
UTSW |
10 |
67,055,411 (GRCm39) |
missense |
probably benign |
0.39 |
R7113:Jmjd1c
|
UTSW |
10 |
66,993,780 (GRCm39) |
missense |
probably damaging |
0.98 |
R7225:Jmjd1c
|
UTSW |
10 |
67,061,844 (GRCm39) |
missense |
probably benign |
0.00 |
R7249:Jmjd1c
|
UTSW |
10 |
67,025,596 (GRCm39) |
missense |
probably benign |
0.01 |
R7361:Jmjd1c
|
UTSW |
10 |
67,054,143 (GRCm39) |
missense |
probably benign |
0.10 |
R7383:Jmjd1c
|
UTSW |
10 |
67,025,537 (GRCm39) |
missense |
probably benign |
0.14 |
R7460:Jmjd1c
|
UTSW |
10 |
67,052,815 (GRCm39) |
missense |
probably benign |
0.24 |
R7475:Jmjd1c
|
UTSW |
10 |
67,061,092 (GRCm39) |
missense |
probably benign |
0.22 |
R7502:Jmjd1c
|
UTSW |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
0.99 |
R7699:Jmjd1c
|
UTSW |
10 |
67,054,195 (GRCm39) |
missense |
probably benign |
0.10 |
R7745:Jmjd1c
|
UTSW |
10 |
67,052,824 (GRCm39) |
missense |
probably damaging |
0.96 |
R7897:Jmjd1c
|
UTSW |
10 |
67,075,644 (GRCm39) |
missense |
probably damaging |
0.96 |
R7908:Jmjd1c
|
UTSW |
10 |
67,061,621 (GRCm39) |
missense |
probably benign |
|
R7911:Jmjd1c
|
UTSW |
10 |
67,067,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R7967:Jmjd1c
|
UTSW |
10 |
67,085,461 (GRCm39) |
missense |
probably damaging |
1.00 |
R8058:Jmjd1c
|
UTSW |
10 |
67,090,274 (GRCm39) |
missense |
not run |
|
R8224:Jmjd1c
|
UTSW |
10 |
67,080,628 (GRCm39) |
missense |
noncoding transcript |
|
R8251:Jmjd1c
|
UTSW |
10 |
67,075,068 (GRCm39) |
missense |
noncoding transcript |
|
R8797:Jmjd1c
|
UTSW |
10 |
67,060,616 (GRCm39) |
missense |
probably benign |
|
R8833:Jmjd1c
|
UTSW |
10 |
67,054,162 (GRCm39) |
missense |
probably benign |
0.03 |
R9262:Jmjd1c
|
UTSW |
10 |
67,083,793 (GRCm39) |
missense |
probably benign |
0.39 |
R9354:Jmjd1c
|
UTSW |
10 |
67,059,875 (GRCm39) |
missense |
probably damaging |
0.99 |
R9373:Jmjd1c
|
UTSW |
10 |
66,932,495 (GRCm39) |
intron |
probably benign |
|
R9477:Jmjd1c
|
UTSW |
10 |
66,993,734 (GRCm39) |
nonsense |
probably null |
|
R9519:Jmjd1c
|
UTSW |
10 |
66,993,798 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9701:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
R9802:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
RF011:Jmjd1c
|
UTSW |
10 |
67,055,978 (GRCm39) |
missense |
possibly damaging |
0.47 |
Z1088:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1176:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1177:Jmjd1c
|
UTSW |
10 |
67,081,904 (GRCm39) |
missense |
probably damaging |
0.98 |
Z1177:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- TGAGTAAGGTTCTTGTTCTACAACG -3'
(R):5'- TTCATTCAACACAGCAGTTCC -3'
Sequencing Primer
(F):5'- AAGGTTCTTGTTCTACAACGTTCCAG -3'
(R):5'- GACAGCATCTGAATGACTATTTCTC -3'
|
Posted On |
2015-10-21 |