Other mutations in this stock |
Total: 74 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgrv1 |
T |
C |
13: 81,581,644 (GRCm39) |
D4800G |
probably benign |
Het |
Akna |
T |
C |
4: 63,305,269 (GRCm39) |
D499G |
probably benign |
Het |
Arid1b |
A |
C |
17: 5,387,565 (GRCm39) |
I1673L |
probably benign |
Het |
Bcr |
T |
A |
10: 75,011,161 (GRCm39) |
M24K |
probably benign |
Het |
Bsn |
A |
G |
9: 107,989,854 (GRCm39) |
V1966A |
probably benign |
Het |
Ccdc39 |
T |
C |
3: 33,867,227 (GRCm39) |
N928S |
possibly damaging |
Het |
Cd109 |
CATTTATTTATTTATTTATTTATTTATTTATTTAT |
CATTTATTTATTTATTTATTTATTTATTTATTTATTTAT |
9: 78,619,782 (GRCm39) |
|
probably benign |
Het |
Cdc6 |
G |
A |
11: 98,799,657 (GRCm39) |
|
probably null |
Het |
Cfap97d2 |
A |
T |
8: 13,785,937 (GRCm39) |
N69I |
probably damaging |
Het |
Cmtm1 |
C |
T |
8: 105,020,307 (GRCm39) |
A371T |
probably damaging |
Het |
Cmtm7 |
A |
C |
9: 114,592,459 (GRCm39) |
V46G |
possibly damaging |
Het |
Cmtr1 |
A |
G |
17: 29,906,131 (GRCm39) |
|
probably null |
Het |
Col5a3 |
T |
C |
9: 20,720,887 (GRCm39) |
H149R |
unknown |
Het |
Coro7 |
T |
G |
16: 4,449,858 (GRCm39) |
Q634P |
probably benign |
Het |
Crym |
A |
G |
7: 119,800,298 (GRCm39) |
|
probably null |
Het |
Csmd3 |
A |
T |
15: 47,532,556 (GRCm39) |
F2546L |
probably benign |
Het |
Dmap1 |
T |
C |
4: 117,533,236 (GRCm39) |
T273A |
probably benign |
Het |
Dnah1 |
T |
C |
14: 30,994,899 (GRCm39) |
Y2786C |
probably damaging |
Het |
Echs1 |
A |
C |
7: 139,690,561 (GRCm39) |
|
probably benign |
Het |
Edem3 |
T |
A |
1: 151,680,449 (GRCm39) |
F525I |
possibly damaging |
Het |
Exosc3 |
T |
C |
4: 45,319,642 (GRCm39) |
I127V |
probably benign |
Het |
Fam193a |
A |
G |
5: 34,578,130 (GRCm39) |
D208G |
probably benign |
Het |
Farp2 |
T |
C |
1: 93,508,621 (GRCm39) |
V773A |
probably benign |
Het |
Gas6 |
A |
G |
8: 13,516,848 (GRCm39) |
V550A |
probably damaging |
Het |
Gkn3 |
C |
T |
6: 87,360,507 (GRCm39) |
A163T |
probably damaging |
Het |
Gm2423 |
A |
G |
13: 13,406,961 (GRCm39) |
|
noncoding transcript |
Het |
Grin1 |
T |
C |
2: 25,184,482 (GRCm39) |
S911G |
probably benign |
Het |
Hkdc1 |
T |
C |
10: 62,236,133 (GRCm39) |
I470V |
probably benign |
Het |
Hsdl2 |
T |
A |
4: 59,593,270 (GRCm39) |
|
probably benign |
Het |
Iars2 |
A |
G |
1: 185,048,176 (GRCm39) |
Y519H |
probably damaging |
Het |
Ikbkb |
A |
T |
8: 23,159,623 (GRCm39) |
M455K |
probably benign |
Het |
Keap1 |
G |
T |
9: 21,142,706 (GRCm39) |
H516Q |
probably benign |
Het |
Klk1b27 |
A |
T |
7: 43,705,956 (GRCm39) |
I220F |
probably damaging |
Het |
Knop1 |
G |
A |
7: 118,455,087 (GRCm39) |
|
probably benign |
Het |
Lrch3 |
A |
T |
16: 32,808,854 (GRCm39) |
|
probably null |
Het |
Lrrc2 |
G |
A |
9: 110,799,228 (GRCm39) |
|
probably null |
Het |
Lrrk2 |
T |
C |
15: 91,648,962 (GRCm39) |
L1652P |
probably damaging |
Het |
Mbl1 |
T |
C |
14: 40,876,515 (GRCm39) |
V71A |
possibly damaging |
Het |
Med8 |
T |
A |
4: 118,268,998 (GRCm39) |
M1K |
probably null |
Het |
Mfsd2b |
A |
G |
12: 4,918,992 (GRCm39) |
L88P |
probably benign |
Het |
Mkrn2 |
T |
A |
6: 115,588,811 (GRCm39) |
C185S |
probably damaging |
Het |
Myo1d |
A |
G |
11: 80,670,667 (GRCm39) |
|
probably benign |
Het |
Napg |
T |
G |
18: 63,125,563 (GRCm39) |
|
probably null |
Het |
Ncor1 |
A |
G |
11: 62,269,438 (GRCm39) |
M253T |
probably benign |
Het |
Oas3 |
T |
C |
5: 120,904,321 (GRCm39) |
T518A |
unknown |
Het |
Obox3-ps8 |
A |
G |
17: 36,764,036 (GRCm39) |
|
noncoding transcript |
Het |
Opn5 |
A |
T |
17: 42,918,091 (GRCm39) |
M57K |
probably damaging |
Het |
Or10a3n |
A |
T |
7: 108,493,028 (GRCm39) |
F195L |
probably benign |
Het |
Or13j1 |
T |
C |
4: 43,705,785 (GRCm39) |
K261R |
probably damaging |
Het |
Or52p1 |
T |
C |
7: 104,267,696 (GRCm39) |
V270A |
possibly damaging |
Het |
Pde2a |
C |
G |
7: 101,143,825 (GRCm39) |
P148R |
possibly damaging |
Het |
Prss56 |
C |
T |
1: 87,113,059 (GRCm39) |
L158F |
possibly damaging |
Het |
Psmg3 |
G |
A |
5: 139,812,125 (GRCm39) |
|
probably benign |
Het |
Rnase9 |
C |
T |
14: 51,276,901 (GRCm39) |
G26R |
probably damaging |
Het |
Skint4 |
T |
C |
4: 111,975,433 (GRCm39) |
V131A |
possibly damaging |
Het |
Slc10a4 |
T |
A |
5: 73,169,398 (GRCm39) |
V341E |
probably damaging |
Het |
Slc16a14 |
T |
C |
1: 84,890,741 (GRCm39) |
Y188C |
probably damaging |
Het |
Slc7a1 |
G |
T |
5: 148,272,250 (GRCm39) |
P476T |
probably damaging |
Het |
Smchd1 |
A |
T |
17: 71,743,742 (GRCm39) |
C474* |
probably null |
Het |
Smurf1 |
A |
T |
5: 144,829,994 (GRCm39) |
D336E |
probably damaging |
Het |
Sox30 |
G |
A |
11: 45,875,592 (GRCm39) |
S448N |
probably benign |
Het |
Spag11a |
G |
A |
8: 19,209,398 (GRCm39) |
V63I |
possibly damaging |
Het |
Sprr1b |
T |
G |
3: 92,344,600 (GRCm39) |
K92T |
probably damaging |
Het |
Stam2 |
T |
C |
2: 52,610,962 (GRCm39) |
Y20C |
probably benign |
Het |
Sult2b1 |
T |
A |
7: 45,391,489 (GRCm39) |
Y97F |
probably damaging |
Het |
Tecpr2 |
C |
T |
12: 110,899,410 (GRCm39) |
P593S |
probably benign |
Het |
Tek |
T |
C |
4: 94,687,397 (GRCm39) |
V170A |
possibly damaging |
Het |
Tiam2 |
A |
G |
17: 3,500,592 (GRCm39) |
Y891C |
probably benign |
Het |
Tmem220 |
A |
G |
11: 66,920,819 (GRCm39) |
T75A |
possibly damaging |
Het |
Traf3 |
T |
G |
12: 111,228,470 (GRCm39) |
D560E |
probably damaging |
Het |
Txlnb |
A |
G |
10: 17,675,015 (GRCm39) |
H56R |
probably benign |
Het |
Vmn2r98 |
A |
T |
17: 19,286,602 (GRCm39) |
N367Y |
probably benign |
Het |
Vnn3 |
A |
G |
10: 23,727,589 (GRCm39) |
I36M |
possibly damaging |
Het |
Zbtb7a |
G |
A |
10: 80,980,274 (GRCm39) |
R156H |
probably damaging |
Het |
|
Other mutations in Lhcgr |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00468:Lhcgr
|
APN |
17 |
89,049,874 (GRCm39) |
missense |
probably benign |
|
IGL00661:Lhcgr
|
APN |
17 |
89,057,546 (GRCm39) |
missense |
probably benign |
|
IGL00840:Lhcgr
|
APN |
17 |
89,061,164 (GRCm39) |
splice site |
probably benign |
|
IGL01434:Lhcgr
|
APN |
17 |
89,049,865 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01489:Lhcgr
|
APN |
17 |
89,072,401 (GRCm39) |
splice site |
probably benign |
|
IGL02077:Lhcgr
|
APN |
17 |
89,057,558 (GRCm39) |
missense |
probably benign |
0.06 |
IGL02533:Lhcgr
|
APN |
17 |
89,049,838 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02948:Lhcgr
|
APN |
17 |
89,050,050 (GRCm39) |
missense |
probably damaging |
1.00 |
capybara
|
UTSW |
17 |
89,050,014 (GRCm39) |
nonsense |
probably null |
|
coro
|
UTSW |
17 |
89,049,677 (GRCm39) |
nonsense |
probably null |
|
nutria
|
UTSW |
17 |
89,049,801 (GRCm39) |
missense |
probably damaging |
1.00 |
R0101:Lhcgr
|
UTSW |
17 |
89,072,598 (GRCm39) |
missense |
probably damaging |
1.00 |
R0101:Lhcgr
|
UTSW |
17 |
89,072,598 (GRCm39) |
missense |
probably damaging |
1.00 |
R0556:Lhcgr
|
UTSW |
17 |
89,079,491 (GRCm39) |
missense |
probably damaging |
0.99 |
R1824:Lhcgr
|
UTSW |
17 |
89,057,585 (GRCm39) |
missense |
probably benign |
0.00 |
R1846:Lhcgr
|
UTSW |
17 |
89,072,575 (GRCm39) |
critical splice donor site |
probably null |
|
R1852:Lhcgr
|
UTSW |
17 |
89,072,604 (GRCm39) |
missense |
probably damaging |
0.99 |
R2352:Lhcgr
|
UTSW |
17 |
89,049,727 (GRCm39) |
missense |
possibly damaging |
0.52 |
R3147:Lhcgr
|
UTSW |
17 |
89,065,771 (GRCm39) |
missense |
probably damaging |
0.96 |
R3756:Lhcgr
|
UTSW |
17 |
89,061,284 (GRCm39) |
missense |
possibly damaging |
0.77 |
R4180:Lhcgr
|
UTSW |
17 |
89,049,711 (GRCm39) |
missense |
probably damaging |
1.00 |
R4540:Lhcgr
|
UTSW |
17 |
89,063,036 (GRCm39) |
missense |
probably benign |
|
R4688:Lhcgr
|
UTSW |
17 |
89,072,580 (GRCm39) |
missense |
probably damaging |
0.99 |
R4717:Lhcgr
|
UTSW |
17 |
89,049,895 (GRCm39) |
missense |
probably benign |
0.00 |
R4776:Lhcgr
|
UTSW |
17 |
89,050,125 (GRCm39) |
missense |
probably damaging |
1.00 |
R4903:Lhcgr
|
UTSW |
17 |
89,049,789 (GRCm39) |
missense |
probably damaging |
1.00 |
R5195:Lhcgr
|
UTSW |
17 |
89,050,374 (GRCm39) |
missense |
probably damaging |
1.00 |
R5231:Lhcgr
|
UTSW |
17 |
89,063,039 (GRCm39) |
missense |
probably damaging |
1.00 |
R5361:Lhcgr
|
UTSW |
17 |
89,050,281 (GRCm39) |
missense |
probably damaging |
1.00 |
R5683:Lhcgr
|
UTSW |
17 |
89,079,447 (GRCm39) |
missense |
probably benign |
0.00 |
R5758:Lhcgr
|
UTSW |
17 |
89,049,976 (GRCm39) |
missense |
probably damaging |
0.99 |
R5929:Lhcgr
|
UTSW |
17 |
89,050,436 (GRCm39) |
nonsense |
probably null |
|
R5987:Lhcgr
|
UTSW |
17 |
89,063,006 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Lhcgr
|
UTSW |
17 |
89,050,132 (GRCm39) |
missense |
probably damaging |
1.00 |
R6477:Lhcgr
|
UTSW |
17 |
89,049,801 (GRCm39) |
missense |
probably damaging |
1.00 |
R6610:Lhcgr
|
UTSW |
17 |
89,077,307 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7234:Lhcgr
|
UTSW |
17 |
89,099,359 (GRCm39) |
missense |
possibly damaging |
0.96 |
R7282:Lhcgr
|
UTSW |
17 |
89,065,811 (GRCm39) |
missense |
probably benign |
|
R7320:Lhcgr
|
UTSW |
17 |
89,049,506 (GRCm39) |
missense |
probably benign |
|
R7398:Lhcgr
|
UTSW |
17 |
89,079,474 (GRCm39) |
missense |
probably benign |
0.03 |
R7710:Lhcgr
|
UTSW |
17 |
89,050,210 (GRCm39) |
missense |
probably damaging |
1.00 |
R8034:Lhcgr
|
UTSW |
17 |
89,049,784 (GRCm39) |
missense |
probably damaging |
1.00 |
R8108:Lhcgr
|
UTSW |
17 |
89,049,478 (GRCm39) |
nonsense |
probably null |
|
R8150:Lhcgr
|
UTSW |
17 |
89,049,677 (GRCm39) |
nonsense |
probably null |
|
R8151:Lhcgr
|
UTSW |
17 |
89,049,677 (GRCm39) |
nonsense |
probably null |
|
R8236:Lhcgr
|
UTSW |
17 |
89,050,014 (GRCm39) |
nonsense |
probably null |
|
R8901:Lhcgr
|
UTSW |
17 |
89,063,030 (GRCm39) |
missense |
probably damaging |
1.00 |
R8916:Lhcgr
|
UTSW |
17 |
89,061,170 (GRCm39) |
critical splice donor site |
probably null |
|
R9632:Lhcgr
|
UTSW |
17 |
89,049,532 (GRCm39) |
missense |
probably benign |
|
R9716:Lhcgr
|
UTSW |
17 |
89,050,446 (GRCm39) |
missense |
probably damaging |
1.00 |
U24488:Lhcgr
|
UTSW |
17 |
89,079,513 (GRCm39) |
critical splice acceptor site |
probably null |
|
X0028:Lhcgr
|
UTSW |
17 |
89,050,150 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Lhcgr
|
UTSW |
17 |
89,049,698 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Lhcgr
|
UTSW |
17 |
89,072,409 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Lhcgr
|
UTSW |
17 |
89,061,333 (GRCm39) |
missense |
probably benign |
0.00 |
|