Mutagenetix > Incidental Mutation

Incidental Mutation 'R4705:Nol11'

355153

Institutional Source

Beutler Lab

Gene Symbol

Nol11

Ensembl Gene

ENSMUSG00000018433

Gene Name

nucleolar protein 11

Synonyms

1500002M01Rik

MMRRC Submission

041953-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.933) question?

Stock #

R4705 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

107057489-107080207 bp(-) (GRCm39)

Type of Mutation

intron

DNA Base Change (assembly)

A to G at 107075544 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000102368 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000018577] [ENSMUST00000106757]

AlphaFold

Q8BJW5

Predicted Effect

probably benign
Transcript: ENSMUST00000018577

SMART Domains

Protein: ENSMUSP00000018577
Gene: ENSMUSG00000018433

Domain	Start	End	E-Value	Type
SCOP:d1jmxb_	32	176	3e-3	SMART
Pfam:NUC205	200	243	3.7e-26	PFAM
low complexity region	619	629	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000106757

SMART Domains

Protein: ENSMUSP00000102368
Gene: ENSMUSG00000018433

Domain	Start	End	E-Value	Type
SCOP:d1jmxb_	32	176	3e-3	SMART
Pfam:NUC205	200	243	7.3e-29	PFAM
low complexity region	599	609	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136917

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000139168

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 96.8%
20x: 94.2%

Validation Efficiency

96% (113/118)

Allele List at MGI

Other mutations in this stock

Total: 102 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700056E22Rik	A	G	1: 183,765,369 (GRCm39)	V230A	possibly damaging	Het
2010315B03Rik	T	C	9: 124,056,631 (GRCm39)	T123A	possibly damaging	Het
Abca4	T	C	3: 121,899,019 (GRCm39)	V667A	probably damaging	Het
Abcb5	A	G	12: 118,929,040 (GRCm39)	S4P	possibly damaging	Het
Adam25	G	T	8: 41,207,163 (GRCm39)	C143F	probably damaging	Het
Ahnak	C	A	19: 8,994,270 (GRCm39)	H5185N	probably benign	Het
Apobec4	A	G	1: 152,632,001 (GRCm39)	T10A	probably benign	Het
Ascc1	A	G	10: 59,885,624 (GRCm39)	Y225C	probably damaging	Het
Aspscr1	A	T	11: 120,579,771 (GRCm39)	K39N	possibly damaging	Het
Atf7ip	C	T	6: 136,538,192 (GRCm39)	P483L	probably damaging	Het
Atp11a	C	G	8: 12,863,118 (GRCm39)	P99R	probably damaging	Het
B4galnt1	G	T	10: 127,003,394 (GRCm39)	V172F	possibly damaging	Het
Bag6	C	A	17: 35,361,319 (GRCm39)	P476H	probably damaging	Het
Bltp1	C	T	3: 37,096,038 (GRCm39)	T1108I	probably benign	Het
C2cd3	A	G	7: 100,044,395 (GRCm39)	K326E	possibly damaging	Het
Casp1	A	G	9: 5,306,204 (GRCm39)	D363G	probably damaging	Het
Ccdc33	G	T	9: 58,024,840 (GRCm39)	Q129K	probably benign	Het
Ccdc88a	T	C	11: 29,372,586 (GRCm39)	I107T	probably benign	Het
Cela2a	T	C	4: 141,548,722 (GRCm39)	N138S	probably benign	Het
Cfap61	A	C	2: 145,877,122 (GRCm39)	R460S	probably damaging	Het
Clstn2	T	C	9: 97,345,612 (GRCm39)	N579D	possibly damaging	Het
Col13a1	C	A	10: 61,685,944 (GRCm39)	G683W	unknown	Het
Col4a2	G	A	8: 11,363,504 (GRCm39)	R14Q	possibly damaging	Het
Cpa6	A	G	1: 10,551,283 (GRCm39)	S164P	probably benign	Het
Cpq	A	G	15: 33,497,484 (GRCm39)	N408S	probably benign	Het
Ctnnal1	T	C	4: 56,812,579 (GRCm39)	T690A	probably benign	Het
Cx3cl1	A	T	8: 95,506,835 (GRCm39)	N280I	probably benign	Het
Cyp2b19	C	T	7: 26,456,717 (GRCm39)	R36C	probably benign	Het
Ddx51	T	C	5: 110,803,174 (GRCm39)	V269A	probably damaging	Het
Dipk2a	T	C	9: 94,402,688 (GRCm39)	N325D	possibly damaging	Het
Dlst	G	T	12: 85,165,616 (GRCm39)		probably null	Het
Dmkn	G	C	7: 30,463,406 (GRCm39)	A20P	probably damaging	Het
Dnhd1	T	C	7: 105,304,948 (GRCm39)	I330T	probably damaging	Het
Dock3	G	A	9: 106,902,535 (GRCm39)	H292Y	probably damaging	Het
Ell	A	G	8: 71,031,584 (GRCm39)	D94G	possibly damaging	Het
Enam	T	A	5: 88,651,650 (GRCm39)	L1053*	probably null	Het
Fam3d	T	C	14: 8,349,347 (GRCm38)	E201G	probably benign	Het
Fcgbp	A	G	7: 27,806,721 (GRCm39)	K2230E	probably benign	Het
Frmd5	G	T	2: 121,393,344 (GRCm39)		probably benign	Het
Gas2l1	G	A	11: 5,010,867 (GRCm39)	S654L	possibly damaging	Het
Gltpd2	G	T	11: 70,410,966 (GRCm39)	E86*	probably null	Het
Glyat	T	C	19: 12,628,661 (GRCm39)	L152P	possibly damaging	Het
Gm17330	T	C	12: 24,018,783 (GRCm39)	T22A	probably damaging	Het
Gm9931	T	A	1: 147,157,591 (GRCm39)		noncoding transcript	Het
Gpatch1	A	T	7: 34,998,730 (GRCm39)		probably null	Het
Gpr4	T	C	7: 18,956,819 (GRCm39)	L247P	probably damaging	Het
Gtpbp3	G	A	8: 71,943,758 (GRCm39)	E214K	probably benign	Het
Hdac7	G	T	15: 97,709,468 (GRCm39)	Q21K	probably damaging	Het
Hivep3	A	G	4: 119,729,247 (GRCm39)		probably benign	Het
Hk2	C	T	6: 82,716,631 (GRCm39)	M300I	possibly damaging	Het
Ighv1-61	T	C	12: 115,322,899 (GRCm39)	Y71C	probably damaging	Het
Il36b	T	C	2: 24,044,630 (GRCm39)	V10A	probably benign	Het
Inpp5f	G	T	7: 128,265,711 (GRCm39)	S152I	probably damaging	Het
Jag1	C	A	2: 136,938,229 (GRCm39)	W257L	probably damaging	Het
Jak2	T	A	19: 29,272,315 (GRCm39)	N612K	possibly damaging	Het
Kalrn	T	C	16: 34,024,327 (GRCm39)	D610G	probably damaging	Het
Kbtbd6	A	G	14: 79,690,046 (GRCm39)	D247G	probably benign	Het
Kif15	A	G	9: 122,789,058 (GRCm39)		probably null	Het
Kndc1	A	G	7: 139,510,036 (GRCm39)	T1293A	possibly damaging	Het
Lpar5	T	C	6: 125,059,170 (GRCm39)	I297T	possibly damaging	Het
Lpin2	T	A	17: 71,539,138 (GRCm39)		probably benign	Het
Lypd10	T	A	7: 24,412,934 (GRCm39)	L114Q	probably damaging	Het
Mfsd4a	A	T	1: 131,981,309 (GRCm39)	L230Q	probably damaging	Het
Mmp8	T	C	9: 7,565,550 (GRCm39)	V313A	probably benign	Het
Mrpl19	A	T	6: 81,941,266 (GRCm39)	D98E	probably damaging	Het
Mybl1	A	G	1: 9,760,340 (GRCm39)	I86T	probably damaging	Het
Nadk	C	A	4: 155,669,684 (GRCm39)	P157T	probably benign	Het
Necab1	T	C	4: 15,052,628 (GRCm39)	T117A	probably damaging	Het
Nucb2	G	A	7: 116,139,262 (GRCm39)		probably null	Het
Nup58	G	T	14: 60,488,664 (GRCm39)	P19T	unknown	Het
Odf2	T	A	2: 29,794,046 (GRCm39)	L301Q	probably damaging	Het
Oog4	T	C	4: 143,165,445 (GRCm39)	Y234C	probably benign	Het
Or11j4	A	G	14: 50,630,257 (GRCm39)	I15V	probably benign	Het
Or1ab2	T	A	8: 72,864,044 (GRCm39)	F211L	probably damaging	Het
Papln	T	C	12: 83,823,982 (GRCm39)		probably null	Het
Paqr6	C	T	3: 88,273,236 (GRCm39)	A76V	probably benign	Het
Pclo	A	G	5: 14,726,494 (GRCm39)		probably benign	Het
Pdzd8	T	C	19: 59,333,743 (GRCm39)	T93A	possibly damaging	Het
Pkdrej	A	T	15: 85,705,368 (GRCm39)	Y189*	probably null	Het
Pknox2	A	T	9: 36,834,934 (GRCm39)	N178K	possibly damaging	Het
Pla2g15	T	A	8: 106,889,691 (GRCm39)	M321K	probably benign	Het
Plxnd1	A	C	6: 115,935,581 (GRCm39)	L1735R	probably damaging	Het
Polm	T	A	11: 5,787,663 (GRCm39)	D30V	possibly damaging	Het
Rap1gap2	T	A	11: 74,328,265 (GRCm39)	I100F	probably damaging	Het
Rasgef1c	T	A	11: 49,869,294 (GRCm39)	W414R	probably benign	Het
Rassf1	A	G	9: 107,435,066 (GRCm39)	D187G	probably benign	Het
Rhag	T	C	17: 41,147,329 (GRCm39)	I397T	probably benign	Het
Rnft2	A	G	5: 118,366,928 (GRCm39)	F269S	probably damaging	Het
Rnmt	T	C	18: 68,447,196 (GRCm39)	F360S	probably damaging	Het
Ror2	C	T	13: 53,271,333 (GRCm39)	A329T	probably benign	Het
Slc4a1	T	A	11: 102,247,084 (GRCm39)	N501I	possibly damaging	Het
Slc4a7	T	A	14: 14,733,856 (GRCm38)	S89T	probably damaging	Het
Sptbn1	G	A	11: 30,050,660 (GRCm39)	H2310Y	probably benign	Het
Tbc1d9b	C	A	11: 50,031,289 (GRCm39)	N103K	probably benign	Het
Tbxas1	T	C	6: 39,060,791 (GRCm39)		probably null	Het
Tmem100	C	T	11: 89,926,389 (GRCm39)	T72I	probably damaging	Het
Ttc38	A	G	15: 85,737,164 (GRCm39)	T350A	probably benign	Het
Ubr4	C	T	4: 139,177,840 (GRCm39)	T3241M	probably damaging	Het
Unc13d	A	T	11: 115,964,214 (GRCm39)	M350K	possibly damaging	Het
Vit	T	C	17: 78,932,543 (GRCm39)	I550T	probably damaging	Het
Vmn1r31	C	A	6: 58,448,953 (GRCm39)	*304L	probably null	Het
Zbtb12	T	A	17: 35,115,377 (GRCm39)	H387Q	possibly damaging	Het

Other mutations in Nol11

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00646:Nol11	APN	11	107,064,286 (GRCm39)	missense	probably benign
IGL01656:Nol11	APN	11	107,079,998 (GRCm39)	missense	probably benign	0.00
IGL01687:Nol11	APN	11	107,077,695 (GRCm39)	missense	probably damaging	0.97
IGL02179:Nol11	APN	11	107,080,082 (GRCm39)	start codon destroyed	probably null	1.00
IGL02538:Nol11	APN	11	107,064,199 (GRCm39)	missense	probably benign	0.02
IGL03395:Nol11	APN	11	107,066,548 (GRCm39)	missense	probably benign	0.06
R0526:Nol11	UTSW	11	107,075,597 (GRCm39)	nonsense	probably null
R1734:Nol11	UTSW	11	107,066,449 (GRCm39)	missense	possibly damaging	0.80
R2143:Nol11	UTSW	11	107,071,881 (GRCm39)	missense	probably benign	0.03
R2385:Nol11	UTSW	11	107,080,032 (GRCm39)	missense	probably benign	0.40
R3036:Nol11	UTSW	11	107,064,070 (GRCm39)	missense	possibly damaging	0.87
R3522:Nol11	UTSW	11	107,064,454 (GRCm39)	missense	possibly damaging	0.94
R3895:Nol11	UTSW	11	107,059,173 (GRCm39)	missense	probably damaging	1.00
R4404:Nol11	UTSW	11	107,064,551 (GRCm39)	missense	probably damaging	1.00
R4664:Nol11	UTSW	11	107,071,826 (GRCm39)	missense	possibly damaging	0.89
R5704:Nol11	UTSW	11	107,064,195 (GRCm39)	missense	probably benign	0.43
R5991:Nol11	UTSW	11	107,061,971 (GRCm39)	missense	probably benign	0.02
R6221:Nol11	UTSW	11	107,062,442 (GRCm39)	missense	possibly damaging	0.50
R6222:Nol11	UTSW	11	107,062,442 (GRCm39)	missense	possibly damaging	0.50
R6223:Nol11	UTSW	11	107,062,442 (GRCm39)	missense	possibly damaging	0.50
R6285:Nol11	UTSW	11	107,071,860 (GRCm39)	missense	probably benign	0.01
R6467:Nol11	UTSW	11	107,071,912 (GRCm39)	missense	possibly damaging	0.95
R7080:Nol11	UTSW	11	107,070,878 (GRCm39)	missense	probably damaging	1.00
R7679:Nol11	UTSW	11	107,064,142 (GRCm39)	missense	probably benign	0.00
R7767:Nol11	UTSW	11	107,069,908 (GRCm39)	missense	possibly damaging	0.67
R8831:Nol11	UTSW	11	107,067,662 (GRCm39)	missense	probably benign
R9063:Nol11	UTSW	11	107,069,857 (GRCm39)	missense	possibly damaging	0.62
R9063:Nol11	UTSW	11	107,064,240 (GRCm39)	missense	probably benign	0.04
R9329:Nol11	UTSW	11	107,071,765 (GRCm39)	missense	probably damaging	1.00
R9378:Nol11	UTSW	11	107,064,505 (GRCm39)	missense	probably benign	0.29
R9473:Nol11	UTSW	11	107,075,581 (GRCm39)	missense	probably null	0.81
R9515:Nol11	UTSW	11	107,064,278 (GRCm39)	missense	possibly damaging	0.76
R9771:Nol11	UTSW	11	107,069,914 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CTTGAGAATTTTGCTCAGTGTCTC -3'
(R):5'- TGTCAGCTGAAGTCCATAGAATC -3'

Sequencing Primer
(F):5'- TTATGCAAATCAGGCTGGCC -3'
(R):5'- GCTGAAGTCCATAGAATCCACTCAG -3'

Posted On

2015-10-21