Mutagenetix > Incidental Mutation

Incidental Mutation 'R0402:Vmn2r19'

35615

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r19

Ensembl Gene

ENSMUSG00000091260

Gene Name

vomeronasal 2, receptor 19

Synonyms

EG232358

MMRRC Submission

038607-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.063) question?

Stock #

R0402 (G1)

Quality Score

112

Status

Validated

Chromosome

Chromosomal Location

123285292-123313496 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 123313141 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 737 (E737G)

Ref Sequence

ENSEMBL: ENSMUSP00000073604 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000073948]

AlphaFold

G5E8G4

Predicted Effect

probably damaging
Transcript: ENSMUST00000073948
AA Change: E737G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000073604
Gene: ENSMUSG00000091260
AA Change: E737G

Domain	Start	End	E-Value	Type
signal peptide	1	17	N/A	INTRINSIC
Pfam:ANF_receptor	81	476	2.9e-35	PFAM
Pfam:NCD3G	518	571	8.3e-23	PFAM
Pfam:7tm_3	603	839	7.2e-52	PFAM

Meta Mutation Damage Score

0.6467

Coding Region Coverage

1x: 98.2%
3x: 97.0%
10x: 94.5%
20x: 88.7%

Validation Efficiency

100% (74/74)

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017N19Rik	A	T	10: 100,445,115 (GRCm39)	K165N	probably damaging	Het
Adam6b	T	A	12: 113,453,615 (GRCm39)	M144K	probably damaging	Het
Arhgap44	T	C	11: 64,922,903 (GRCm39)		probably benign	Het
Arl5c	T	A	11: 97,885,939 (GRCm39)	I21F	probably damaging	Het
Bglap2	C	T	3: 88,285,552 (GRCm39)	G40D	probably damaging	Het
Bptf	T	C	11: 106,964,940 (GRCm39)	E1303G	probably damaging	Het
Calhm1	T	C	19: 47,129,896 (GRCm39)	T209A	probably damaging	Het
Ccr8	A	G	9: 119,923,976 (GRCm39)		probably null	Het
Chkb	C	T	15: 89,313,610 (GRCm39)	R65Q	probably benign	Het
Col4a1	T	C	8: 11,249,838 (GRCm39)		probably benign	Het
Cryzl2	A	G	1: 157,292,014 (GRCm39)	T98A	probably benign	Het
D430041D05Rik	T	C	2: 103,998,509 (GRCm39)	T1080A	probably damaging	Het
Dhx8	C	A	11: 101,643,223 (GRCm39)	T765N	probably damaging	Het
Dicer1	T	C	12: 104,697,323 (GRCm39)	D78G	probably benign	Het
Drd2	A	G	9: 49,316,271 (GRCm39)	I344V	probably benign	Het
Edil3	A	T	13: 89,347,570 (GRCm39)		probably benign	Het
Fbxw19	C	T	9: 109,313,493 (GRCm39)	G235D	probably benign	Het
Fzd1	T	C	5: 4,805,702 (GRCm39)	K627E	possibly damaging	Het
Garin1b	A	G	6: 29,323,901 (GRCm39)	T209A	probably benign	Het
Garin4	T	C	1: 190,896,637 (GRCm39)	D2G	probably benign	Het
Gm10638	A	G	8: 87,472,828 (GRCm39)		probably benign	Het
H6pd	G	T	4: 150,080,773 (GRCm39)	A24E	probably damaging	Het
Hectd2	G	T	19: 36,578,929 (GRCm39)		probably null	Het
Hps5	A	G	7: 46,440,333 (GRCm39)		probably benign	Het
Irx3	T	C	8: 92,527,296 (GRCm39)	N136S	possibly damaging	Het
Kcmf1	T	C	6: 72,826,568 (GRCm39)	M1V	probably null	Het
Klrb1	A	T	6: 128,687,583 (GRCm39)	F104I	probably benign	Het
Lrfn5	T	C	12: 61,886,803 (GRCm39)	M197T	probably benign	Het
Mpdz	A	C	4: 81,279,677 (GRCm39)	M51R	possibly damaging	Het
Mtbp	G	T	15: 55,432,466 (GRCm39)	E258*	probably null	Het
Mylk3	T	A	8: 86,079,539 (GRCm39)	H373L	probably damaging	Het
Myrfl	A	G	10: 116,664,882 (GRCm39)	S383P	probably damaging	Het
Nt5c	T	C	11: 115,381,468 (GRCm39)	*195W	probably null	Het
Ocstamp	A	G	2: 165,238,184 (GRCm39)	V360A	possibly damaging	Het
Or10ak16	A	T	4: 118,750,426 (GRCm39)	I49F	possibly damaging	Het
Or10al6	T	A	17: 38,083,284 (GRCm39)	C247S	probably damaging	Het
Or4k35	A	G	2: 111,100,208 (GRCm39)	F168S	probably damaging	Het
Or4p19	A	T	2: 88,242,378 (GRCm39)	V208D	probably damaging	Het
Or5an9	A	G	19: 12,186,953 (GRCm39)	T8A	probably damaging	Het
Otop2	T	C	11: 115,217,234 (GRCm39)		probably benign	Het
Pom121l2	A	T	13: 22,172,649 (GRCm39)		probably benign	Het
Pon2	T	A	6: 5,272,410 (GRCm39)	K137*	probably null	Het
Ppip5k2	T	A	1: 97,647,579 (GRCm39)	Q1049L	probably benign	Het
Ralgapa2	C	T	2: 146,276,729 (GRCm39)	V504M	probably damaging	Het
Rph3a	G	A	5: 121,080,317 (GRCm39)	H654Y	probably damaging	Het
Sh2d1b1	T	C	1: 170,107,342 (GRCm39)		probably benign	Het
Slc15a2	G	A	16: 36,595,960 (GRCm39)	T154I	probably benign	Het
Slc45a3	T	C	1: 131,905,265 (GRCm39)	V96A	possibly damaging	Het
Slc7a4	A	G	16: 17,393,497 (GRCm39)	S101P	probably damaging	Het
Smco2	T	C	6: 146,772,633 (GRCm39)		probably benign	Het
Spata2	A	T	2: 167,325,580 (GRCm39)	V413E	probably benign	Het
Specc1l	A	G	10: 75,082,260 (GRCm39)	E552G	probably damaging	Het
Sstr5	C	T	17: 25,711,008 (GRCm39)	V74M	probably benign	Het
Timm50	G	A	7: 28,006,280 (GRCm39)	R274W	probably damaging	Het
Tll2	A	G	19: 41,087,132 (GRCm39)	V573A	possibly damaging	Het
Tm7sf3	C	A	6: 146,507,685 (GRCm39)	R459M	possibly damaging	Het
Txk	A	G	5: 72,889,105 (GRCm39)		probably null	Het
Uroc1	A	G	6: 90,324,284 (GRCm39)	D436G	probably damaging	Het
Vmn1r13	T	A	6: 57,187,083 (GRCm39)	Y81N	possibly damaging	Het
Wfs1	A	G	5: 37,134,324 (GRCm39)		probably benign	Het
Zfp1	G	A	8: 112,396,875 (GRCm39)	E285K	probably damaging	Het
Zfp1005	T	A	2: 150,111,136 (GRCm39)	C609S	possibly damaging	Het
Zfp661	G	A	2: 127,419,640 (GRCm39)	Q167*	probably null	Het
Zswim8	T	C	14: 20,760,834 (GRCm39)	F36S	probably damaging	Het
Zw10	A	G	9: 48,980,023 (GRCm39)	T385A	probably benign	Het

Other mutations in Vmn2r19

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01407:Vmn2r19	APN	6	123,306,826 (GRCm39)	missense	possibly damaging	0.92
IGL02294:Vmn2r19	APN	6	123,306,937 (GRCm39)	missense	probably benign	0.19
IGL02442:Vmn2r19	APN	6	123,286,621 (GRCm39)	missense	possibly damaging	0.94
IGL02871:Vmn2r19	APN	6	123,313,042 (GRCm39)	missense	probably damaging	1.00
H8562:Vmn2r19	UTSW	6	123,292,861 (GRCm39)	missense	possibly damaging	0.82
R0025:Vmn2r19	UTSW	6	123,308,506 (GRCm39)	missense	probably benign	0.01
R0389:Vmn2r19	UTSW	6	123,312,945 (GRCm39)	missense	possibly damaging	0.53
R0411:Vmn2r19	UTSW	6	123,286,703 (GRCm39)	missense	probably damaging	0.98
R0554:Vmn2r19	UTSW	6	123,313,102 (GRCm39)	missense	probably damaging	0.99
R0578:Vmn2r19	UTSW	6	123,312,931 (GRCm39)	missense	probably damaging	1.00
R1102:Vmn2r19	UTSW	6	123,313,132 (GRCm39)	missense	probably benign	0.28
R1652:Vmn2r19	UTSW	6	123,292,656 (GRCm39)	missense	possibly damaging	0.68
R1663:Vmn2r19	UTSW	6	123,313,411 (GRCm39)	missense	probably benign	0.11
R1817:Vmn2r19	UTSW	6	123,307,011 (GRCm39)	missense	possibly damaging	0.80
R1866:Vmn2r19	UTSW	6	123,308,597 (GRCm39)	critical splice donor site	probably null
R1928:Vmn2r19	UTSW	6	123,308,589 (GRCm39)	missense	probably damaging	1.00
R1997:Vmn2r19	UTSW	6	123,292,880 (GRCm39)	missense	probably damaging	0.98
R2013:Vmn2r19	UTSW	6	123,292,954 (GRCm39)	missense	probably benign	0.01
R2015:Vmn2r19	UTSW	6	123,292,954 (GRCm39)	missense	probably benign	0.01
R2088:Vmn2r19	UTSW	6	123,312,795 (GRCm39)	missense	probably damaging	1.00
R2126:Vmn2r19	UTSW	6	123,293,033 (GRCm39)	missense	possibly damaging	0.82
R2128:Vmn2r19	UTSW	6	123,285,289 (GRCm39)	splice site	probably null
R2256:Vmn2r19	UTSW	6	123,306,845 (GRCm39)	missense	probably benign	0.20
R2517:Vmn2r19	UTSW	6	123,306,937 (GRCm39)	missense	probably benign	0.19
R3753:Vmn2r19	UTSW	6	123,292,548 (GRCm39)	missense	possibly damaging	0.80
R3817:Vmn2r19	UTSW	6	123,286,601 (GRCm39)	missense	probably damaging	1.00
R3929:Vmn2r19	UTSW	6	123,292,587 (GRCm39)	missense	probably benign	0.01
R3934:Vmn2r19	UTSW	6	123,292,628 (GRCm39)	missense	probably damaging	1.00
R4232:Vmn2r19	UTSW	6	123,306,871 (GRCm39)	missense	probably benign
R4574:Vmn2r19	UTSW	6	123,292,939 (GRCm39)	missense	probably benign	0.01
R4886:Vmn2r19	UTSW	6	123,286,800 (GRCm39)	missense	probably benign	0.05
R4995:Vmn2r19	UTSW	6	123,306,869 (GRCm39)	missense	probably benign	0.00
R5107:Vmn2r19	UTSW	6	123,286,602 (GRCm39)	nonsense	probably null
R5232:Vmn2r19	UTSW	6	123,312,916 (GRCm39)	missense	probably benign
R6102:Vmn2r19	UTSW	6	123,306,907 (GRCm39)	missense	probably damaging	1.00
R6105:Vmn2r19	UTSW	6	123,293,054 (GRCm39)	missense	possibly damaging	0.70
R6280:Vmn2r19	UTSW	6	123,313,212 (GRCm39)	missense	probably benign
R6393:Vmn2r19	UTSW	6	123,293,112 (GRCm39)	missense	possibly damaging	0.80
R6502:Vmn2r19	UTSW	6	123,293,067 (GRCm39)	missense	possibly damaging	0.68
R6617:Vmn2r19	UTSW	6	123,313,494 (GRCm39)	makesense	probably null
R6742:Vmn2r19	UTSW	6	123,306,917 (GRCm39)	missense	possibly damaging	0.90
R7662:Vmn2r19	UTSW	6	123,308,521 (GRCm39)	missense	probably benign	0.33
R8041:Vmn2r19	UTSW	6	123,312,750 (GRCm39)	missense	possibly damaging	0.94
R8054:Vmn2r19	UTSW	6	123,292,998 (GRCm39)	missense	probably damaging	1.00
R8074:Vmn2r19	UTSW	6	123,312,904 (GRCm39)	missense	probably damaging	0.96
R8267:Vmn2r19	UTSW	6	123,313,221 (GRCm39)	missense	possibly damaging	0.50
R8287:Vmn2r19	UTSW	6	123,308,588 (GRCm39)	missense	probably damaging	1.00
R8937:Vmn2r19	UTSW	6	123,293,283 (GRCm39)	critical splice donor site	probably null
R9058:Vmn2r19	UTSW	6	123,313,021 (GRCm39)	missense	possibly damaging	0.53
R9119:Vmn2r19	UTSW	6	123,292,527 (GRCm39)	missense	possibly damaging	0.68
R9384:Vmn2r19	UTSW	6	123,292,923 (GRCm39)	missense	probably benign	0.00
X0058:Vmn2r19	UTSW	6	123,285,308 (GRCm39)	missense	probably benign	0.00
Z1088:Vmn2r19	UTSW	6	123,285,298 (GRCm39)	missense	probably benign	0.02
Z1177:Vmn2r19	UTSW	6	123,313,036 (GRCm39)	missense	possibly damaging	0.89

Predicted Primers

PCR Primer
(F):5'- GTTGCCTTCAATGCCATCAAACCAG -3'
(R):5'- TTGCCAATGATAGCAGAGACACTCG -3'

Sequencing Primer
(F):5'- CATCAAACCAGGAAGCAGATTG -3'
(R):5'- CTTTTGCCCTAAGGAGGAAATC -3'

Posted On

2013-05-09