Incidental Mutation 'R4703:Tnn'
ID 356178
Institutional Source Beutler Lab
Gene Symbol Tnn
Ensembl Gene ENSMUSG00000026725
Gene Name tenascin N
Synonyms Tnw, tenascin-W
MMRRC Submission 041951-MU
Accession Numbers

Genbank: NM_177839.3; Ensembl: ENSMUST00000039178

Essential gene? Possibly non essential (E-score: 0.442) question?
Stock # R4703 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 160085029-160153580 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) G to T at 160116245 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 999 (D999E)
Ref Sequence ENSEMBL: ENSMUSP00000039452 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000039178] [ENSMUST00000131919]
AlphaFold Q80Z71
Predicted Effect possibly damaging
Transcript: ENSMUST00000039178
AA Change: D999E

PolyPhen 2 Score 0.837 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000039452
Gene: ENSMUSG00000026725
AA Change: D999E

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
coiled coil region 100 132 N/A INTRINSIC
EGF_like 170 198 3.5e1 SMART
EGF 201 229 2.29e1 SMART
EGF_like 232 260 2.86e1 SMART
FN3 262 341 1.81e-8 SMART
FN3 351 432 1.08e-6 SMART
FN3 443 521 1.19e-8 SMART
FN3 531 608 2.64e-10 SMART
FN3 619 696 1.6e-9 SMART
FN3 707 784 9.04e-9 SMART
FN3 795 872 7.34e-9 SMART
FN3 883 960 9.04e-9 SMART
FN3 971 1048 1.07e-10 SMART
FN3 1059 1136 7.57e-11 SMART
FN3 1147 1224 4.59e-10 SMART
FN3 1235 1312 1.95e-4 SMART
FBG 1327 1539 1.16e-114 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000131919
SMART Domains Protein: ENSMUSP00000115685
Gene: ENSMUSG00000026725

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
coiled coil region 100 132 N/A INTRINSIC
EGF_like 170 198 3.5e1 SMART
EGF 201 229 2.29e1 SMART
EGF_like 232 260 2.86e1 SMART
FN3 262 341 1.81e-8 SMART
FN3 351 432 1.08e-6 SMART
FN3 443 521 1.19e-8 SMART
FN3 531 608 2.64e-10 SMART
FN3 619 696 1.6e-9 SMART
FN3 707 784 9.04e-9 SMART
FN3 795 872 7.57e-11 SMART
FN3 883 960 4.59e-10 SMART
FN3 971 1048 1.95e-4 SMART
FBG 1063 1275 1.16e-114 SMART
Meta Mutation Damage Score 0.2239 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 97.0%
  • 20x: 94.6%
Validation Efficiency 97% (98/101)
Allele List at MGI

All alleles(2) : Targeted, other(2)

Other mutations in this stock
Total: 89 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921517D22Rik T A 13: 59,689,528 (GRCm38) T248S possibly damaging Het
AA986860 T C 1: 130,743,355 (GRCm38) V438A probably benign Het
Adam25 G T 8: 40,754,126 (GRCm38) C143F probably damaging Het
Aox2 T A 1: 58,358,957 (GRCm38) F1286I possibly damaging Het
Apobec4 A G 1: 152,756,250 (GRCm38) T10A probably benign Het
Arhgap5 C T 12: 52,517,583 (GRCm38) P446S probably damaging Het
Arhgef40 A G 14: 52,002,310 (GRCm38) N1327S probably damaging Het
Armc12 A G 17: 28,532,362 (GRCm38) D110G probably benign Het
Ascc1 A G 10: 60,049,802 (GRCm38) Y225C probably damaging Het
Aspscr1 A T 11: 120,688,945 (GRCm38) K39N possibly damaging Het
B4galnt1 G T 10: 127,167,525 (GRCm38) V172F possibly damaging Het
B4galt1 A G 4: 40,823,569 (GRCm38) V174A probably benign Het
Bcl11a C A 11: 24,163,725 (GRCm38) A356E possibly damaging Het
Bri3bp C T 5: 125,451,766 (GRCm38) L110F probably damaging Het
Cacna1b T C 2: 24,654,463 (GRCm38) D1231G probably damaging Het
Ccdc33 T A 9: 58,033,670 (GRCm38) I430F possibly damaging Het
Cgn A G 3: 94,776,095 (GRCm38) probably benign Het
Crbn T A 6: 106,782,922 (GRCm38) I317F possibly damaging Het
Cyp2d22 A C 15: 82,375,917 (GRCm38) L22R probably damaging Het
Dnah7a C T 1: 53,447,317 (GRCm38) probably null Het
Dnajc12 A G 10: 63,386,650 (GRCm38) probably null Het
Dntt T A 19: 41,039,803 (GRCm38) D179E probably benign Het
Enam T A 5: 88,503,791 (GRCm38) L1053* probably null Het
Epn1 T A 7: 5,095,148 (GRCm38) D319E probably damaging Het
Evpl C G 11: 116,222,505 (GRCm38) R1453P probably damaging Het
Focad T A 4: 88,342,321 (GRCm38) probably null Het
Foxp2 A T 6: 15,411,248 (GRCm38) M542L probably benign Het
Gak T A 5: 108,569,877 (GRCm38) Q1299L probably damaging Het
Galnt5 G T 2: 57,998,907 (GRCm38) R173I possibly damaging Het
Gli1 G T 10: 127,330,855 (GRCm38) P843Q possibly damaging Het
Gm5422 G T 10: 31,249,612 (GRCm38) noncoding transcript Het
Gna14 T G 19: 16,598,980 (GRCm38) V117G possibly damaging Het
Gpr6 T C 10: 41,071,041 (GRCm38) T182A probably damaging Het
Ifi204 C A 1: 173,760,361 (GRCm38) probably benign Het
Ifih1 A T 2: 62,598,876 (GRCm38) L906H probably benign Het
Ift88 A G 14: 57,480,850 (GRCm38) probably benign Het
Ighd A G 12: 113,416,041 (GRCm38) probably benign Het
Ighv11-1 A C 12: 113,982,002 (GRCm38) I77R possibly damaging Het
Il22 A T 10: 118,205,606 (GRCm38) I75F probably damaging Het
Il23r A T 6: 67,490,702 (GRCm38) I27K probably damaging Het
Inpp5a A C 7: 139,558,923 (GRCm38) N261T probably damaging Het
Ints8 T G 4: 11,223,785 (GRCm38) Q686P possibly damaging Het
Iqcf4 T C 9: 106,568,320 (GRCm38) probably null Het
Irf2bp1 C T 7: 19,005,571 (GRCm38) R379C possibly damaging Het
Iws1 C T 18: 32,080,013 (GRCm38) P165S probably benign Het
Kalrn T C 16: 34,203,957 (GRCm38) D610G probably damaging Het
Kcna10 A T 3: 107,194,610 (GRCm38) I186F probably benign Het
Limk2 C A 11: 3,347,586 (GRCm38) E329* probably null Het
Nadk C A 4: 155,585,227 (GRCm38) P157T probably benign Het
Notch1 T G 2: 26,471,158 (GRCm38) K1107Q probably benign Het
Nsd1 T A 13: 55,214,063 (GRCm38) D281E probably damaging Het
Olfml2a T A 2: 38,951,238 (GRCm38) L262Q probably damaging Het
Olfr1294 T A 2: 111,537,768 (GRCm38) I174L probably benign Het
Olfr231 A G 1: 174,117,398 (GRCm38) I206T possibly damaging Het
Olfr371 A G 8: 85,230,608 (GRCm38) T38A possibly damaging Het
Olfr374 T A 8: 72,110,200 (GRCm38) F211L probably damaging Het
Olfr557 A T 7: 102,698,270 (GRCm38) T11S probably benign Het
Otogl A C 10: 107,821,924 (GRCm38) D1048E probably damaging Het
Oxnad1 T C 14: 32,095,470 (GRCm38) W96R probably damaging Het
Pcdh15 A T 10: 74,450,163 (GRCm38) D743V probably damaging Het
Pclo A G 5: 14,676,480 (GRCm38) probably benign Het
Pcnx C T 12: 81,895,164 (GRCm38) T112I probably benign Het
Pctp T C 11: 89,987,273 (GRCm38) E145G possibly damaging Het
Pip5k1b T C 19: 24,355,153 (GRCm38) K389R probably damaging Het
Pla2g15 T A 8: 106,163,059 (GRCm38) M321K probably benign Het
Pnlip T A 19: 58,676,467 (GRCm38) D242E probably damaging Het
Ptpn21 T C 12: 98,679,392 (GRCm38) T1096A probably benign Het
Rims3 A T 4: 120,883,297 (GRCm38) probably benign Het
Rnf219 A G 14: 104,506,208 (GRCm38) L145P probably benign Het
Scfd2 T A 5: 74,519,595 (GRCm38) Q299L probably benign Het
Selplg T C 5: 113,819,033 (GRCm38) D404G probably benign Het
Slc15a5 T C 6: 138,055,645 (GRCm38) D237G probably benign Het
Slc16a12 T A 19: 34,674,891 (GRCm38) H285L possibly damaging Het
Sox2 C A 3: 34,650,713 (GRCm38) R100S probably damaging Het
Sspo G A 6: 48,500,453 (GRCm38) C4969Y probably damaging Het
Stxbp2 A G 8: 3,632,521 (GRCm38) S37G probably damaging Het
Tbxas1 T C 6: 39,083,857 (GRCm38) probably null Het
Tcf4 A G 18: 69,657,910 (GRCm38) Y307C probably damaging Het
Thsd7b A T 1: 130,049,909 (GRCm38) probably benign Het
Trmt13 C A 3: 116,594,598 (GRCm38) W63L probably benign Het
Tsc2 T C 17: 24,604,909 (GRCm38) N915S probably benign Het
Tyrp1 T A 4: 80,840,806 (GRCm38) probably null Het
Uvrag A T 7: 98,989,587 (GRCm38) I315N probably damaging Het
Vmn1r31 C A 6: 58,471,968 (GRCm38) *304L probably null Het
Vmn2r59 T A 7: 42,012,262 (GRCm38) I710L probably benign Het
Vmn2r82 A T 10: 79,378,807 (GRCm38) H208L probably damaging Het
Wtap T C 17: 12,980,824 (GRCm38) T91A probably benign Het
Xirp1 A T 9: 120,017,027 (GRCm38) V930E probably damaging Het
Xpo4 T G 14: 57,590,108 (GRCm38) H877P probably benign Het
Other mutations in Tnn
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00095:Tnn APN 1 160,125,451 (GRCm38) missense possibly damaging 0.65
IGL00433:Tnn APN 1 160,098,206 (GRCm38) splice site probably benign
IGL00858:Tnn APN 1 160,088,392 (GRCm38) critical splice donor site probably null
IGL00939:Tnn APN 1 160,147,530 (GRCm38) missense probably damaging 1.00
IGL01569:Tnn APN 1 160,120,554 (GRCm38) missense possibly damaging 0.51
IGL01591:Tnn APN 1 160,125,574 (GRCm38) missense probably damaging 1.00
IGL01628:Tnn APN 1 160,147,602 (GRCm38) missense possibly damaging 0.89
IGL01811:Tnn APN 1 160,107,135 (GRCm38) missense probably damaging 1.00
IGL01813:Tnn APN 1 160,088,438 (GRCm38) missense probably damaging 1.00
IGL02340:Tnn APN 1 160,145,205 (GRCm38) missense probably benign 0.00
IGL02488:Tnn APN 1 160,140,593 (GRCm38) missense probably benign 0.21
IGL02535:Tnn APN 1 160,122,652 (GRCm38) splice site probably null
IGL02563:Tnn APN 1 160,114,553 (GRCm38) missense probably damaging 1.00
IGL02572:Tnn APN 1 160,086,107 (GRCm38) missense probably damaging 1.00
IGL02740:Tnn APN 1 160,140,777 (GRCm38) splice site probably benign
IGL02818:Tnn APN 1 160,116,278 (GRCm38) missense possibly damaging 0.86
IGL03284:Tnn APN 1 160,125,452 (GRCm38) missense probably benign 0.01
1mM(1):Tnn UTSW 1 160,097,341 (GRCm38) missense probably damaging 1.00
PIT4305001:Tnn UTSW 1 160,086,077 (GRCm38) missense possibly damaging 0.91
R0023:Tnn UTSW 1 160,104,928 (GRCm38) missense probably benign 0.00
R0234:Tnn UTSW 1 160,088,466 (GRCm38) missense probably damaging 1.00
R0234:Tnn UTSW 1 160,088,466 (GRCm38) missense probably damaging 1.00
R0316:Tnn UTSW 1 160,120,567 (GRCm38) missense possibly damaging 0.93
R0492:Tnn UTSW 1 160,120,757 (GRCm38) missense probably damaging 0.99
R0547:Tnn UTSW 1 160,116,337 (GRCm38) intron probably benign
R1067:Tnn UTSW 1 160,125,398 (GRCm38) missense probably damaging 1.00
R1563:Tnn UTSW 1 160,125,415 (GRCm38) missense probably damaging 1.00
R1565:Tnn UTSW 1 160,097,265 (GRCm38) missense probably damaging 1.00
R1615:Tnn UTSW 1 160,118,408 (GRCm38) missense possibly damaging 0.93
R1637:Tnn UTSW 1 160,147,600 (GRCm38) missense probably damaging 1.00
R1707:Tnn UTSW 1 160,145,144 (GRCm38) missense probably damaging 1.00
R1758:Tnn UTSW 1 160,147,584 (GRCm38) missense possibly damaging 0.61
R1797:Tnn UTSW 1 160,140,688 (GRCm38) missense probably damaging 1.00
R1847:Tnn UTSW 1 160,116,182 (GRCm38) missense possibly damaging 0.51
R1925:Tnn UTSW 1 160,097,229 (GRCm38) missense probably damaging 1.00
R2182:Tnn UTSW 1 160,140,600 (GRCm38) splice site probably null
R2196:Tnn UTSW 1 160,097,228 (GRCm38) nonsense probably null
R2225:Tnn UTSW 1 160,147,465 (GRCm38) missense probably damaging 1.00
R2227:Tnn UTSW 1 160,147,465 (GRCm38) missense probably damaging 1.00
R2286:Tnn UTSW 1 160,110,509 (GRCm38) missense possibly damaging 0.89
R2850:Tnn UTSW 1 160,139,287 (GRCm38) missense probably benign 0.00
R3110:Tnn UTSW 1 160,116,286 (GRCm38) missense possibly damaging 0.71
R3111:Tnn UTSW 1 160,107,055 (GRCm38) missense probably damaging 0.98
R3112:Tnn UTSW 1 160,116,286 (GRCm38) missense possibly damaging 0.71
R3729:Tnn UTSW 1 160,146,240 (GRCm38) missense probably damaging 1.00
R4183:Tnn UTSW 1 160,097,355 (GRCm38) missense probably damaging 1.00
R4439:Tnn UTSW 1 160,116,080 (GRCm38) missense probably benign
R4441:Tnn UTSW 1 160,116,080 (GRCm38) missense probably benign
R4588:Tnn UTSW 1 160,145,111 (GRCm38) missense probably benign 0.25
R4646:Tnn UTSW 1 160,146,042 (GRCm38) missense probably benign
R4647:Tnn UTSW 1 160,146,042 (GRCm38) missense probably benign
R4648:Tnn UTSW 1 160,146,042 (GRCm38) missense probably benign
R4701:Tnn UTSW 1 160,147,768 (GRCm38) missense possibly damaging 0.72
R4737:Tnn UTSW 1 160,146,089 (GRCm38) missense probably damaging 1.00
R4801:Tnn UTSW 1 160,145,033 (GRCm38) missense possibly damaging 0.90
R4802:Tnn UTSW 1 160,145,033 (GRCm38) missense possibly damaging 0.90
R4868:Tnn UTSW 1 160,130,873 (GRCm38) missense possibly damaging 0.64
R4977:Tnn UTSW 1 160,120,618 (GRCm38) missense probably damaging 1.00
R5011:Tnn UTSW 1 160,126,379 (GRCm38) missense possibly damaging 0.89
R5026:Tnn UTSW 1 160,146,137 (GRCm38) missense probably benign 0.00
R5027:Tnn UTSW 1 160,145,211 (GRCm38) missense probably damaging 1.00
R5049:Tnn UTSW 1 160,140,738 (GRCm38) missense probably benign 0.00
R5119:Tnn UTSW 1 160,120,552 (GRCm38) missense probably damaging 0.98
R5128:Tnn UTSW 1 160,122,894 (GRCm38) missense probably damaging 0.98
R5234:Tnn UTSW 1 160,144,999 (GRCm38) missense possibly damaging 0.95
R5398:Tnn UTSW 1 160,147,522 (GRCm38) missense probably benign 0.00
R5424:Tnn UTSW 1 160,122,702 (GRCm38) missense possibly damaging 0.69
R5452:Tnn UTSW 1 160,110,261 (GRCm38) missense probably benign 0.13
R5466:Tnn UTSW 1 160,120,536 (GRCm38) missense possibly damaging 0.93
R6022:Tnn UTSW 1 160,110,358 (GRCm38) missense probably benign 0.00
R6062:Tnn UTSW 1 160,098,278 (GRCm38) missense probably damaging 1.00
R6086:Tnn UTSW 1 160,086,120 (GRCm38) missense probably damaging 1.00
R6132:Tnn UTSW 1 160,146,071 (GRCm38) missense probably damaging 0.96
R6324:Tnn UTSW 1 160,145,204 (GRCm38) missense probably damaging 0.96
R6455:Tnn UTSW 1 160,114,719 (GRCm38) missense probably damaging 1.00
R6563:Tnn UTSW 1 160,088,398 (GRCm38) missense probably damaging 1.00
R6650:Tnn UTSW 1 160,114,583 (GRCm38) missense probably damaging 1.00
R6806:Tnn UTSW 1 160,120,708 (GRCm38) missense possibly damaging 0.95
R6810:Tnn UTSW 1 160,104,842 (GRCm38) missense probably damaging 1.00
R7157:Tnn UTSW 1 160,126,377 (GRCm38) nonsense probably null
R7243:Tnn UTSW 1 160,107,117 (GRCm38) missense probably benign 0.07
R7340:Tnn UTSW 1 160,146,022 (GRCm38) missense probably damaging 0.98
R7472:Tnn UTSW 1 160,110,347 (GRCm38) missense probably benign 0.12
R7502:Tnn UTSW 1 160,110,359 (GRCm38) missense probably benign 0.00
R7527:Tnn UTSW 1 160,118,504 (GRCm38) missense possibly damaging 0.51
R7608:Tnn UTSW 1 160,088,414 (GRCm38) nonsense probably null
R7746:Tnn UTSW 1 160,114,685 (GRCm38) missense probably damaging 0.97
R8096:Tnn UTSW 1 160,122,841 (GRCm38) missense probably damaging 1.00
R8136:Tnn UTSW 1 160,107,060 (GRCm38) missense probably damaging 0.96
R8191:Tnn UTSW 1 160,125,518 (GRCm38) missense probably damaging 1.00
R8334:Tnn UTSW 1 160,118,483 (GRCm38) missense probably damaging 1.00
R8335:Tnn UTSW 1 160,118,483 (GRCm38) missense probably damaging 1.00
R8337:Tnn UTSW 1 160,118,483 (GRCm38) missense probably damaging 1.00
R8338:Tnn UTSW 1 160,118,483 (GRCm38) missense probably damaging 1.00
R8427:Tnn UTSW 1 160,130,686 (GRCm38) missense probably damaging 0.99
R8433:Tnn UTSW 1 160,097,220 (GRCm38) missense possibly damaging 0.81
R8479:Tnn UTSW 1 160,122,827 (GRCm38) missense probably benign 0.06
R8505:Tnn UTSW 1 160,146,023 (GRCm38) missense probably damaging 0.98
R8554:Tnn UTSW 1 160,110,416 (GRCm38) missense probably damaging 1.00
R8717:Tnn UTSW 1 160,116,276 (GRCm38) missense possibly damaging 0.51
R8850:Tnn UTSW 1 160,110,244 (GRCm38) critical splice donor site probably null
R8928:Tnn UTSW 1 160,125,529 (GRCm38) missense probably damaging 1.00
R9209:Tnn UTSW 1 160,126,416 (GRCm38) missense probably benign 0.02
X0019:Tnn UTSW 1 160,086,146 (GRCm38) missense probably damaging 1.00
Z1176:Tnn UTSW 1 160,146,293 (GRCm38) missense probably benign
Z1177:Tnn UTSW 1 160,126,527 (GRCm38) missense probably damaging 0.98
Predicted Primers PCR Primer
(F):5'- ATTACCTGTGTGACCTTCGGTG -3'
(R):5'- TGTGGAACCAAGAGTCTCTGTC -3'

Sequencing Primer
(F):5'- ACCTTCGGTGTTGGCTTTC -3'
(R):5'- CCAAGAGTCTCTGTCTATGAGATCAC -3'
Posted On 2015-10-21