Mutagenetix > Incidental Mutation

Incidental Mutation 'R4735:Fras1'

356447

Institutional Source

Beutler Lab

Gene Symbol

Fras1

Ensembl Gene

ENSMUSG00000034687

Gene Name

Fraser extracellular matrix complex subunit 1

Synonyms

bl, E130113P14Rik

MMRRC Submission

041962-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R4735 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

96373955-96784728 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 96588163 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 539 (D539G)

Ref Sequence

ENSEMBL: ENSMUSP00000043250 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000036019]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000036019
AA Change: D539G

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000043250
Gene: ENSMUSG00000034687
AA Change: D539G

Domain	Start	End	E-Value	Type
signal peptide	1	25	N/A	INTRINSIC
VWC	27	86	9.23e-9	SMART
VWC	94	151	9.37e-10	SMART
VWC	158	215	8.61e-9	SMART
VWC	220	277	7.1e-10	SMART
VWC	284	341	7.8e-7	SMART
VWC	365	415	1.93e-1	SMART
FU	408	459	3.33e-1	SMART
FU	461	504	9.12e-8	SMART
EGF_like	466	495	6.67e1	SMART
FU	506	552	6.01e-8	SMART
FU	554	598	2.21e-6	SMART
FU	601	646	1.28e-11	SMART
FU	648	704	4.19e-7	SMART
FU	707	752	9.12e-8	SMART
FU	754	799	1.11e-6	SMART
EGF_like	759	790	7.23e1	SMART
FU	802	851	5.44e-6	SMART
EGF_like	807	842	4.55e1	SMART
FU	853	899	7.4e-8	SMART
FU	902	947	4.78e-2	SMART
FU	951	996	4.52e-12	SMART
EGF_like	956	987	2.75e1	SMART
FU	998	1041	1.38e-7	SMART
FU	1045	1088	9.7e-3	SMART
EGF_like	1057	1096	3.16e1	SMART
Pfam:Cadherin_3	1098	1198	5.2e-12	PFAM
Pfam:Cadherin_3	1167	1309	6.5e-27	PFAM
Pfam:Cadherin_3	1278	1442	7e-24	PFAM
Pfam:Cadherin_3	1411	1560	1.3e-23	PFAM
Pfam:Cadherin_3	1561	1693	6.4e-15	PFAM
Pfam:Cadherin_3	1695	1814	1.1e-10	PFAM
Pfam:Cadherin_3	1780	1940	1.6e-18	PFAM
Pfam:Cadherin_3	1906	2061	2.8e-22	PFAM
Pfam:Cadherin_3	2063	2181	3.3e-18	PFAM
Pfam:Cadherin_3	2172	2295	1.4e-26	PFAM
Pfam:Cadherin_3	2296	2408	2.3e-31	PFAM
Pfam:Cadherin_3	2413	2540	7.9e-23	PFAM
Calx_beta	2544	2648	1.23e-10	SMART
Calx_beta	2661	2772	3.3e-11	SMART
Calx_beta	2787	2892	1.21e-9	SMART
Calx_beta	2907	3009	4.45e-3	SMART
Calx_beta	3027	3131	1.5e-14	SMART
Blast:Calx_beta	3162	3187	1e-5	BLAST
transmembrane domain	3902	3924	N/A	INTRINSIC
low complexity region	3927	3935	N/A	INTRINSIC

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.1%
20x: 95.0%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an extracellular matrix protein that appears to function in the regulation of epidermal-basement membrane adhesion and organogenesis during development. Mutations in this gene cause Fraser syndrome, a multisystem malformation that can include craniofacial, urogenital and respiratory system abnormalities. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009]
PHENOTYPE: Mice homozygous for mutations at this locus display a significant amount of embryonic lethality due to hemorrhaging of embryonic blisters. Survival is variable on genetic backgrounds. Kidney development is severely affected and syndactyly is common. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 133 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2700049A03Rik	T	A	12: 71,216,123	I1410N	possibly damaging	Het
4932411N23Rik	T	A	X: 126,814,594	K296M	probably damaging	Het
4932438A13Rik	T	A	3: 37,004,967	N3267K	possibly damaging	Het
9230106D20Rik	T	C	10: 19,660,253		noncoding transcript	Het
Acsf3	T	A	8: 122,781,479	I238N	probably damaging	Het
Ahctf1	T	C	1: 179,753,399	N1746S	probably benign	Het
Akap3	T	C	6: 126,865,638	S407P	probably damaging	Het
Ankfy1	T	A	11: 72,730,611	M241K	probably benign	Het
Ano7	C	A	1: 93,400,494	T622K	probably benign	Het
App	T	C	16: 85,103,314	T83A	probably damaging	Het
Arhgef28	T	A	13: 97,899,729	E1674V	probably damaging	Het
Asb2	C	A	12: 103,325,058	V489L	probably benign	Het
Atrn	T	C	2: 131,020,990	V1330A	probably benign	Het
Brca1	A	G	11: 101,492,175		probably null	Het
Bspry	G	A	4: 62,486,525	R186Q	probably damaging	Het
Cdkn2d	C	G	9: 21,290,889	V21L	probably benign	Het
Celsr1	T	A	15: 85,906,029		probably null	Het
Ckap4	A	G	10: 84,533,520	V116A	possibly damaging	Het
Crb3	A	G	17: 57,065,207	T85A	probably damaging	Het
Cyld	T	C	8: 88,729,650	S443P	probably damaging	Het
Cyp27a1	T	G	1: 74,737,207	V434G	possibly damaging	Het
Cyp2b13	A	G	7: 26,088,295	T339A	probably benign	Het
Dars	A	T	1: 128,376,234	L252*	probably null	Het
Dcaf10	G	A	4: 45,372,769	R394Q	possibly damaging	Het
Ddx55	T	C	5: 124,566,476	F382S	probably damaging	Het
Dnah7b	G	A	1: 46,066,955	R33Q	unknown	Het
Dnm2	G	T	9: 21,474,587	S302I	probably damaging	Het
Dock4	T	A	12: 40,631,526	F75I	probably benign	Het
Dpp10	T	C	1: 123,398,627	N365S	probably benign	Het
Dpy19l3	G	T	7: 35,722,721	Q236K	probably benign	Het
Dsp	T	C	13: 38,196,040	S1655P	probably damaging	Het
Ebpl	A	T	14: 61,342,118	I117N	probably damaging	Het
Edc4	T	A	8: 105,887,186	V386E	probably damaging	Het
Eif2s2	T	A	2: 154,878,547		probably null	Het
Elob	A	T	17: 23,827,588		probably null	Het
Enox2	T	C	X: 49,069,677	I71V	probably damaging	Het
Fam160b1	A	G	19: 57,371,229	E67G	probably damaging	Het
Fez1	A	T	9: 36,860,845	K149*	probably null	Het
Fign	A	G	2: 63,980,438	Y163H	probably damaging	Het
Flnc	G	A	6: 29,455,813	G2048S	probably damaging	Het
Frmd4b	T	C	6: 97,459,259		probably benign	Het
Gan	C	T	8: 117,194,231	T402M	probably damaging	Het
Ganc	T	A	2: 120,436,623		silent	Het
Ggt6	C	A	11: 72,436,599	R103S	probably benign	Het
Gli2	T	C	1: 118,840,322	D725G	probably damaging	Het
Gm15446	T	A	5: 109,942,952	C357S	probably damaging	Het
Gm44501	A	G	17: 40,578,919	N108S	probably benign	Het
Gm6309	A	T	5: 146,168,244	D286E	probably damaging	Het
Gm6358	G	A	16: 89,140,960	G29E	unknown	Het
Gm8251	A	G	1: 44,061,701	I79T	probably benign	Het
Grik5	A	G	7: 25,058,288	I422T	probably damaging	Het
Grin2c	A	G	11: 115,249,596	I1232T	possibly damaging	Het
Gsg1	C	T	6: 135,237,407	R365H	possibly damaging	Het
H2-M2	A	G	17: 37,483,244	S30P	possibly damaging	Het
Hcfc2	A	G	10: 82,712,080	D302G	probably damaging	Het
Hk2	T	C	6: 82,744,974	D128G	probably benign	Het
Hmcn2	C	A	2: 31,383,775	Q1380K	probably benign	Het
Hsp90b1	G	T	10: 86,693,955	P617T	probably damaging	Het
Htr1d	A	G	4: 136,442,886	E142G	probably benign	Het
Hydin	G	A	8: 110,555,632		probably null	Het
Il1r1	T	A	1: 40,293,295	N81K	probably benign	Het
Inpp5b	T	C	4: 124,783,967	S407P	probably damaging	Het
Itpkb	T	C	1: 180,418,215	Y766H	probably damaging	Het
Lyrm2	T	A	4: 32,801,150	I65N	probably damaging	Het
Mink1	T	A	11: 70,609,260		probably null	Het
Mkrn3	C	T	7: 62,419,704	R113H	probably damaging	Het
Msx3	G	A	7: 140,047,885	A157V	probably damaging	Het
Nrxn2	T	G	19: 6,498,454	V59G	possibly damaging	Het
Nt5c3b	T	C	11: 100,440,906	T12A	probably benign	Het
Nwd2	G	A	5: 63,808,251	R1726Q	probably benign	Het
Nynrin	A	G	14: 55,870,168	T911A	probably benign	Het
Olfr1179	T	C	2: 88,402,923	T4A	probably benign	Het
Olfr266	T	A	3: 106,821,680	Y293F	probably damaging	Het
Olfr490	A	G	7: 108,286,313	M271T	probably benign	Het
Olfr609	C	T	7: 103,492,060	V273M	possibly damaging	Het
Olfr611	A	G	7: 103,517,823	I187T	possibly damaging	Het
Olfr659	C	T	7: 104,670,993	T97I	probably benign	Het
Olfr805	A	G	10: 129,722,923	I207T	probably benign	Het
Patl1	G	T	19: 11,922,505	M220I	probably benign	Het
Pcnx2	A	T	8: 125,828,041		probably null	Het
Pigr	A	T	1: 130,846,554	T424S	probably damaging	Het
Pik3c2b	T	A	1: 133,067,049	D250E	probably benign	Het
Ppa2	G	A	3: 133,370,425	E272K	probably benign	Het
Pramel7	G	A	2: 87,490,843	Q283*	probably null	Het
Prelid3b	A	G	2: 174,465,890	I81T	probably benign	Het
Prpf38a	T	C	4: 108,579,045	I24V	possibly damaging	Het
Ptger2	A	G	14: 45,001,838	D311G	possibly damaging	Het
Rab4b	A	T	7: 27,172,766		probably benign	Het
Rad17	A	C	13: 100,619,129	D581E	probably damaging	Het
Samd11	T	C	4: 156,248,773	T333A	probably benign	Het
Scaf4	C	T	16: 90,252,432	D256N	unknown	Het
Serinc2	A	G	4: 130,263,645	F82L	probably benign	Het
Serpina3g	T	A	12: 104,239,113	V37E	probably damaging	Het
Serpinb9c	T	A	13: 33,150,271	M263L	probably benign	Het
Shbg	A	G	11: 69,617,500	I67T	possibly damaging	Het
Slc25a48	G	A	13: 56,449,074		probably null	Het
Slc25a54	T	C	3: 109,098,607	W144R	probably damaging	Het
Slc34a1	A	T	13: 55,413,584	T621S	probably benign	Het
Slc6a18	A	T	13: 73,666,435	C419S	probably benign	Het
Smc5	A	T	19: 23,242,705	D389E	probably benign	Het
Smco3	T	A	6: 136,831,638	E79D	probably damaging	Het
Sox5	A	G	6: 143,960,835	F298S	probably damaging	Het
Sphkap	A	G	1: 83,279,117	S304P	probably benign	Het
Tcea2	C	T	2: 181,686,721	T211I	probably damaging	Het
Tcf4	G	T	18: 69,564,155	S34I	possibly damaging	Het
Tlr4	C	T	4: 66,841,198	R743C	probably damaging	Het
Tmem183a	T	C	1: 134,360,882	E67G	probably damaging	Het
Tpr	C	T	1: 150,442,196	R2152C	possibly damaging	Het
Trbv15	T	C	6: 41,141,424	I38T	probably benign	Het
Treh	G	A	9: 44,681,552	A125T	probably damaging	Het
Trio	A	T	15: 27,752,789		probably null	Het
Ttn	A	G	2: 76,951,949	V981A	probably damaging	Het
Uap1l1	A	G	2: 25,362,720	L436P	probably damaging	Het
Uba7	A	T	9: 107,976,916	I182F	possibly damaging	Het
Unc13c	A	T	9: 73,693,338	S1375T	probably benign	Het
Usp48	C	CT	4: 137,633,369		probably null	Het
Utp20	A	C	10: 88,816,918	V378G	possibly damaging	Het
Vmn1r69	A	T	7: 10,580,999		probably benign	Het
Vmn1r86	A	T	7: 13,102,294	H218Q	probably damaging	Het
Vmn2r121	T	A	X: 124,128,638	I562L	probably benign	Het
Vmn2r45	A	T	7: 8,483,473	I272N	probably damaging	Het
Wdr90	A	G	17: 25,859,450	V320A	probably benign	Het
Wfikkn1	A	G	17: 25,878,393	V319A	possibly damaging	Het
Whamm	A	G	7: 81,571,374	D18G	probably benign	Het
Wrn	T	A	8: 33,285,222	I605F	probably damaging	Het
Zdhhc18	A	G	4: 133,613,867	F232L	probably damaging	Het
Zfp41	T	C	15: 75,618,760	I187T	probably benign	Het
Zfp418	A	G	7: 7,182,562	Y508C	probably damaging	Het
Zfp560	T	G	9: 20,349,051	I172L	probably benign	Het
Zfp943	A	T	17: 21,992,410	D159V	probably benign	Het
Zfp955a	T	C	17: 33,241,722	I479V	probably benign	Het
Zfpm1	T	A	8: 122,335,480	V426D	probably benign	Het
Zic1	C	T	9: 91,364,505	M171I	possibly damaging	Het

Other mutations in Fras1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00332:Fras1	APN	5	96739358	missense	possibly damaging	0.55
IGL00507:Fras1	APN	5	96778189	missense	probably damaging	1.00
IGL00672:Fras1	APN	5	96759450	splice site	probably benign
IGL00772:Fras1	APN	5	96636112	missense	probably benign	0.42
IGL00844:Fras1	APN	5	96534853	splice site	probably benign
IGL00913:Fras1	APN	5	96695076	missense	probably damaging	0.99
IGL00959:Fras1	APN	5	96781281	missense	probably damaging	0.96
IGL00966:Fras1	APN	5	96555221	missense	probably benign	0.00
IGL01296:Fras1	APN	5	96673698	missense	probably null	0.58
IGL01307:Fras1	APN	5	96781692	missense	probably benign
IGL01481:Fras1	APN	5	96657241	missense	probably damaging	1.00
IGL01525:Fras1	APN	5	96739336	missense	probably damaging	0.99
IGL01599:Fras1	APN	5	96709891	missense	possibly damaging	0.94
IGL01646:Fras1	APN	5	96758148	missense	probably benign	0.29
IGL01795:Fras1	APN	5	96778045	missense	probably damaging	1.00
IGL01867:Fras1	APN	5	96588131	missense	probably benign
IGL01869:Fras1	APN	5	96708783	splice site	probably benign
IGL01923:Fras1	APN	5	96735280	missense	probably damaging	1.00
IGL01982:Fras1	APN	5	96739248	missense	possibly damaging	0.46
IGL02109:Fras1	APN	5	96700523	missense	probably benign
IGL02132:Fras1	APN	5	96781637	nonsense	probably null
IGL02171:Fras1	APN	5	96735181	missense	probably benign	0.15
IGL02213:Fras1	APN	5	96645871	nonsense	probably null
IGL02277:Fras1	APN	5	96588118	missense	probably benign	0.00
IGL02507:Fras1	APN	5	96657408	missense	possibly damaging	0.95
IGL02589:Fras1	APN	5	96769513	missense	probably damaging	1.00
IGL02671:Fras1	APN	5	96728616	missense	possibly damaging	0.91
IGL02677:Fras1	APN	5	96545024	missense	probably damaging	1.00
IGL02691:Fras1	APN	5	96744705	missense	possibly damaging	0.68
IGL02741:Fras1	APN	5	96691371	missense	probably benign	0.35
IGL02836:Fras1	APN	5	96534866	missense	possibly damaging	0.67
IGL02850:Fras1	APN	5	96778175	missense	probably damaging	1.00
IGL02998:Fras1	APN	5	96702181	missense	possibly damaging	0.82
IGL03040:Fras1	APN	5	96710101	missense	probably benign
IGL03078:Fras1	APN	5	96636135	missense	probably damaging	1.00
IGL03096:Fras1	APN	5	96764901	missense	probably damaging	1.00
IGL03102:Fras1	APN	5	96726535	missense	probably benign	0.11
IGL03183:Fras1	APN	5	96733781	splice site	probably benign
IGL03189:Fras1	APN	5	96743071	missense	probably benign	0.00
IGL03193:Fras1	APN	5	96778106	missense	probably damaging	0.99
IGL03292:Fras1	APN	5	96707491	missense	probably damaging	1.00
IGL03328:Fras1	APN	5	96781760	missense	probably damaging	0.96
IGL03335:Fras1	APN	5	96733944	splice site	probably benign
IGL03394:Fras1	APN	5	96667477	missense	probably damaging	0.98
IGL03404:Fras1	APN	5	96728581	missense	probably damaging	0.99
baby_ruth	UTSW	5	96708758	missense	probably benign	0.01
BB002:Fras1	UTSW	5	96781584	missense	probably damaging	0.96
BB012:Fras1	UTSW	5	96781584	missense	probably damaging	0.96
G1patch:Fras1	UTSW	5	96781340	missense	possibly damaging	0.91
I0000:Fras1	UTSW	5	96740829	missense	probably damaging	0.99
PIT4581001:Fras1	UTSW	5	96555301	missense	probably benign	0.01
R0028:Fras1	UTSW	5	96677316	missense	probably benign	0.07
R0049:Fras1	UTSW	5	96776622	missense	probably benign	0.07
R0049:Fras1	UTSW	5	96776622	missense	probably benign	0.07
R0099:Fras1	UTSW	5	96614917	critical splice donor site	probably null
R0109:Fras1	UTSW	5	96710077	missense	probably benign	0.01
R0158:Fras1	UTSW	5	96776634	missense	possibly damaging	0.83
R0268:Fras1	UTSW	5	96737009	missense	probably damaging	0.99
R0305:Fras1	UTSW	5	96596888	missense	probably benign
R0352:Fras1	UTSW	5	96726540	missense	probably damaging	0.97
R0359:Fras1	UTSW	5	96762590	missense	probably damaging	0.98
R0371:Fras1	UTSW	5	96555331	missense	possibly damaging	0.90
R0379:Fras1	UTSW	5	96755509	nonsense	probably null
R0395:Fras1	UTSW	5	96769653	missense	possibly damaging	0.50
R0417:Fras1	UTSW	5	96691372	missense	probably benign	0.18
R0454:Fras1	UTSW	5	96762665	missense	probably damaging	0.96
R0456:Fras1	UTSW	5	96554788	missense	probably damaging	1.00
R0456:Fras1	UTSW	5	96714343	splice site	probably null
R0464:Fras1	UTSW	5	96636803	missense	probably damaging	0.98
R0613:Fras1	UTSW	5	96700488	splice site	probably benign
R0652:Fras1	UTSW	5	96781340	missense	possibly damaging	0.91
R0675:Fras1	UTSW	5	96667387	splice site	probably benign
R0765:Fras1	UTSW	5	96552796	missense	probably benign	0.00
R0783:Fras1	UTSW	5	96768430	missense	probably damaging	1.00
R0811:Fras1	UTSW	5	96752998	missense	probably benign	0.35
R0812:Fras1	UTSW	5	96752998	missense	probably benign	0.35
R0943:Fras1	UTSW	5	96726543	missense	probably benign	0.00
R1037:Fras1	UTSW	5	96714463	missense	probably damaging	0.97
R1104:Fras1	UTSW	5	96708671	missense	probably benign	0.00
R1108:Fras1	UTSW	5	96642629	missense	probably damaging	0.99
R1332:Fras1	UTSW	5	96707308	missense	probably benign	0.00
R1336:Fras1	UTSW	5	96707308	missense	probably benign	0.00
R1458:Fras1	UTSW	5	96600733	missense	probably benign	0.00
R1495:Fras1	UTSW	5	96528586	missense	possibly damaging	0.49
R1499:Fras1	UTSW	5	96743187	missense	probably benign	0.31
R1528:Fras1	UTSW	5	96636819	missense	probably damaging	0.99
R1532:Fras1	UTSW	5	96713996	missense	probably damaging	1.00
R1556:Fras1	UTSW	5	96743062	missense	possibly damaging	0.88
R1625:Fras1	UTSW	5	96709978	missense	possibly damaging	0.94
R1625:Fras1	UTSW	5	96713990	missense	probably damaging	1.00
R1645:Fras1	UTSW	5	96700586	missense	possibly damaging	0.90
R1647:Fras1	UTSW	5	96726613	critical splice donor site	probably null
R1648:Fras1	UTSW	5	96726613	critical splice donor site	probably null
R1661:Fras1	UTSW	5	96598909	missense	probably damaging	1.00
R1665:Fras1	UTSW	5	96598909	missense	probably damaging	1.00
R1682:Fras1	UTSW	5	96645873	missense	probably benign	0.00
R1701:Fras1	UTSW	5	96600784	missense	probably benign	0.00
R1716:Fras1	UTSW	5	96552725	missense	probably benign	0.10
R1718:Fras1	UTSW	5	96554889	splice site	probably null
R1800:Fras1	UTSW	5	96709882	missense	probably benign
R1806:Fras1	UTSW	5	96713970	splice site	probably benign
R1806:Fras1	UTSW	5	96764976	missense	possibly damaging	0.88
R1822:Fras1	UTSW	5	96770688	missense	probably damaging	1.00
R1823:Fras1	UTSW	5	96770688	missense	probably damaging	1.00
R1824:Fras1	UTSW	5	96770688	missense	probably damaging	1.00
R1847:Fras1	UTSW	5	96749423	splice site	probably null
R1929:Fras1	UTSW	5	96667437	missense	probably benign	0.24
R1951:Fras1	UTSW	5	96712383	missense	probably benign	0.38
R2093:Fras1	UTSW	5	96781203	missense	probably damaging	1.00
R2283:Fras1	UTSW	5	96654305	missense	probably benign	0.10
R2884:Fras1	UTSW	5	96700268	missense	probably benign	0.07
R2913:Fras1	UTSW	5	96733915	missense	probably benign
R2914:Fras1	UTSW	5	96733915	missense	probably benign
R3054:Fras1	UTSW	5	96764943	missense	probably damaging	0.99
R3117:Fras1	UTSW	5	96771712	missense	probably damaging	1.00
R3118:Fras1	UTSW	5	96771712	missense	probably damaging	1.00
R3691:Fras1	UTSW	5	96781512	missense	probably benign	0.02
R3714:Fras1	UTSW	5	96645970	critical splice donor site	probably null
R3715:Fras1	UTSW	5	96645970	critical splice donor site	probably null
R3801:Fras1	UTSW	5	96733932	missense	probably benign	0.26
R3961:Fras1	UTSW	5	96677385	critical splice donor site	probably null
R4065:Fras1	UTSW	5	96770683	missense	possibly damaging	0.64
R4066:Fras1	UTSW	5	96770683	missense	possibly damaging	0.64
R4076:Fras1	UTSW	5	96743158	missense	probably damaging	1.00
R4124:Fras1	UTSW	5	96770653	missense	probably benign	0.05
R4127:Fras1	UTSW	5	96770653	missense	probably benign	0.05
R4153:Fras1	UTSW	5	96776735	missense	probably benign	0.17
R4233:Fras1	UTSW	5	96714376	missense	possibly damaging	0.91
R4273:Fras1	UTSW	5	96614904	missense	probably benign	0.00
R4355:Fras1	UTSW	5	96700242	missense	probably benign
R4401:Fras1	UTSW	5	96642620	missense	probably damaging	0.97
R4402:Fras1	UTSW	5	96642620	missense	probably damaging	0.97
R4403:Fras1	UTSW	5	96642620	missense	probably damaging	0.97
R4505:Fras1	UTSW	5	96781348	missense	probably damaging	1.00
R4548:Fras1	UTSW	5	96709895	missense	probably benign	0.00
R4559:Fras1	UTSW	5	96781289	missense	probably damaging	1.00
R4629:Fras1	UTSW	5	96776734	missense	probably benign	0.00
R4637:Fras1	UTSW	5	96778088	missense	probably damaging	1.00
R4678:Fras1	UTSW	5	96700568	missense	probably benign	0.13
R4707:Fras1	UTSW	5	96735238	missense	probably damaging	0.96
R4756:Fras1	UTSW	5	96781659	missense	probably benign	0.00
R4762:Fras1	UTSW	5	96731618	missense	probably benign
R4820:Fras1	UTSW	5	96728653	missense	probably benign	0.00
R4847:Fras1	UTSW	5	96544992	missense	possibly damaging	0.94
R4857:Fras1	UTSW	5	96778159	missense	probably benign	0.00
R4909:Fras1	UTSW	5	96708758	missense	probably benign	0.01
R4931:Fras1	UTSW	5	96636840	missense	probably benign	0.02
R4938:Fras1	UTSW	5	96776724	missense	probably damaging	0.99
R4952:Fras1	UTSW	5	96647498	missense	probably benign	0.01
R4965:Fras1	UTSW	5	96726580	missense	possibly damaging	0.95
R4989:Fras1	UTSW	5	96650682	missense	possibly damaging	0.75
R5151:Fras1	UTSW	5	96645110	missense	probably damaging	1.00
R5168:Fras1	UTSW	5	96708757	missense	probably benign	0.00
R5182:Fras1	UTSW	5	96636173	nonsense	probably null
R5214:Fras1	UTSW	5	96769593	missense	probably damaging	1.00
R5220:Fras1	UTSW	5	96768363	missense	probably damaging	1.00
R5235:Fras1	UTSW	5	96600750	missense	probably benign	0.02
R5242:Fras1	UTSW	5	96657250	missense	probably benign	0.11
R5253:Fras1	UTSW	5	96741025	missense	probably damaging	0.99
R5260:Fras1	UTSW	5	96735187	missense	possibly damaging	0.79
R5301:Fras1	UTSW	5	96657266	missense	possibly damaging	0.88
R5411:Fras1	UTSW	5	96645160	missense	probably benign	0.00
R5467:Fras1	UTSW	5	96780053	missense	probably benign	0.04
R5543:Fras1	UTSW	5	96528535	missense	probably benign	0.01
R5555:Fras1	UTSW	5	96677377	missense	probably benign	0.34
R5602:Fras1	UTSW	5	96737021	missense	probably damaging	1.00
R5664:Fras1	UTSW	5	96728535	missense	possibly damaging	0.91
R5695:Fras1	UTSW	5	96781344	missense	probably damaging	1.00
R5717:Fras1	UTSW	5	96781737	missense	possibly damaging	0.93
R5742:Fras1	UTSW	5	96768381	missense	possibly damaging	0.50
R5759:Fras1	UTSW	5	96709916	missense	probably benign	0.02
R5766:Fras1	UTSW	5	96731689	missense	possibly damaging	0.91
R5890:Fras1	UTSW	5	96645948	missense	probably benign
R6052:Fras1	UTSW	5	96764866	missense	probably damaging	1.00
R6058:Fras1	UTSW	5	96709985	missense	probably benign
R6256:Fras1	UTSW	5	96733843	missense	possibly damaging	0.84
R6306:Fras1	UTSW	5	96764946	missense	probably damaging	1.00
R6494:Fras1	UTSW	5	96759564	missense	possibly damaging	0.59
R6638:Fras1	UTSW	5	96758094	missense	possibly damaging	0.94
R6647:Fras1	UTSW	5	96735202	missense	probably damaging	1.00
R6725:Fras1	UTSW	5	96781340	missense	possibly damaging	0.91
R6769:Fras1	UTSW	5	96598941	missense	possibly damaging	0.60
R6771:Fras1	UTSW	5	96598941	missense	possibly damaging	0.60
R6837:Fras1	UTSW	5	96726973	missense	probably damaging	0.99
R6841:Fras1	UTSW	5	96728551	missense	probably damaging	0.99
R6863:Fras1	UTSW	5	96543306	missense	probably benign	0.19
R6868:Fras1	UTSW	5	96682378	missense	probably benign	0.38
R6936:Fras1	UTSW	5	96768352	missense	possibly damaging	0.92
R6997:Fras1	UTSW	5	96614873	nonsense	probably null
R7023:Fras1	UTSW	5	96710084	missense	probably benign	0.00
R7091:Fras1	UTSW	5	96708676	missense	probably benign
R7102:Fras1	UTSW	5	96571041	missense	probably benign
R7120:Fras1	UTSW	5	96752960	nonsense	probably null
R7124:Fras1	UTSW	5	96714401	missense	probably damaging	1.00
R7129:Fras1	UTSW	5	96781284	missense	probably benign	0.00
R7173:Fras1	UTSW	5	96778078	missense	probably damaging	1.00
R7174:Fras1	UTSW	5	96755577	critical splice donor site	probably null
R7185:Fras1	UTSW	5	96636776	missense	probably damaging	1.00
R7191:Fras1	UTSW	5	96614912	missense	probably benign	0.05
R7216:Fras1	UTSW	5	96739314	missense	probably damaging	1.00
R7222:Fras1	UTSW	5	96636186	missense	probably damaging	1.00
R7222:Fras1	UTSW	5	96636809	missense	probably benign	0.00
R7320:Fras1	UTSW	5	96709886	missense	probably benign	0.03
R7335:Fras1	UTSW	5	96736970	missense	possibly damaging	0.82
R7378:Fras1	UTSW	5	96596785	missense	probably damaging	0.98
R7394:Fras1	UTSW	5	96712450	nonsense	probably null
R7412:Fras1	UTSW	5	96614889	missense	probably benign	0.06
R7422:Fras1	UTSW	5	96673599	missense	probably benign	0.21
R7552:Fras1	UTSW	5	96768438	missense	probably damaging	1.00
R7559:Fras1	UTSW	5	96740854	missense	possibly damaging	0.82
R7575:Fras1	UTSW	5	96543314	missense	probably benign	0.02
R7578:Fras1	UTSW	5	96684437	missense	probably damaging	1.00
R7600:Fras1	UTSW	5	96684436	missense	probably damaging	1.00
R7669:Fras1	UTSW	5	96692624	missense	probably benign	0.01
R7710:Fras1	UTSW	5	96645103	nonsense	probably null
R7722:Fras1	UTSW	5	96769554	missense	probably damaging	1.00
R7726:Fras1	UTSW	5	96712451	missense	probably benign	0.41
R7745:Fras1	UTSW	5	96726895	missense	probably benign	0.11
R7777:Fras1	UTSW	5	96752904	missense	probably damaging	1.00
R7923:Fras1	UTSW	5	96739318	missense	probably damaging	1.00
R7925:Fras1	UTSW	5	96781584	missense	probably damaging	0.96
R8000:Fras1	UTSW	5	96762677	missense	probably damaging	0.96
R8056:Fras1	UTSW	5	96744774	missense	probably damaging	1.00
R8058:Fras1	UTSW	5	96694919	missense	probably benign
R8117:Fras1	UTSW	5	96707386	missense	probably damaging	1.00
R8157:Fras1	UTSW	5	96554855	missense	probably benign	0.00
R8312:Fras1	UTSW	5	96588191	missense	probably benign
R8315:Fras1	UTSW	5	96743182	missense	probably damaging	0.97
R8412:Fras1	UTSW	5	96596852	missense	probably benign	0.00
R8546:Fras1	UTSW	5	96709966	missense	probably benign	0.00
R8705:Fras1	UTSW	5	96691401	missense	probably benign	0.01
R8790:Fras1	UTSW	5	96755377	missense	probably damaging	1.00
R8848:Fras1	UTSW	5	96781348	missense	probably damaging	1.00
R8855:Fras1	UTSW	5	96769606	missense
R8871:Fras1	UTSW	5	96707398	missense	probably benign	0.34
R8894:Fras1	UTSW	5	96759543	missense	probably damaging	1.00
R8904:Fras1	UTSW	5	96781279	missense	probably benign	0.16
R8910:Fras1	UTSW	5	96567996	missense	probably benign	0.01
R8916:Fras1	UTSW	5	96752915	missense	probably damaging	1.00
R8929:Fras1	UTSW	5	96769507	missense	probably damaging	0.98
R8995:Fras1	UTSW	5	96712556	missense	possibly damaging	0.83
R9016:Fras1	UTSW	5	96636064	missense	probably damaging	0.96
R9021:Fras1	UTSW	5	96740750	missense	probably damaging	1.00
R9038:Fras1	UTSW	5	96726883	missense	probably benign	0.25
R9204:Fras1	UTSW	5	96735163	missense	probably damaging	1.00
R9222:Fras1	UTSW	5	96657228	missense	probably benign	0.15
R9231:Fras1	UTSW	5	96545045	missense	probably damaging	1.00
R9238:Fras1	UTSW	5	96684361	missense	possibly damaging	0.90
R9257:Fras1	UTSW	5	96762500	missense	probably damaging	1.00
R9302:Fras1	UTSW	5	96534892	missense	probably damaging	1.00
R9329:Fras1	UTSW	5	96736954	missense	probably damaging	1.00
R9361:Fras1	UTSW	5	96776698	missense	probably damaging	1.00
R9430:Fras1	UTSW	5	96781392	missense	probably benign	0.00
R9431:Fras1	UTSW	5	96753014	missense	possibly damaging	0.71
R9474:Fras1	UTSW	5	96739265	missense	probably benign	0.00
R9475:Fras1	UTSW	5	96780070	missense	probably damaging	0.96
R9497:Fras1	UTSW	5	96737036	missense	probably damaging	1.00
R9597:Fras1	UTSW	5	96740692	missense	probably damaging	1.00
R9650:Fras1	UTSW	5	96762528	missense	probably damaging	1.00
R9694:Fras1	UTSW	5	96781686	missense	probably benign	0.03
R9779:Fras1	UTSW	5	96569494	missense	probably damaging	0.99
Z1088:Fras1	UTSW	5	96743211	missense	probably damaging	0.97
Z1088:Fras1	UTSW	5	96758142	missense	probably benign
Z1176:Fras1	UTSW	5	96758142	missense	probably benign
Z1177:Fras1	UTSW	5	96691457	missense	probably damaging	1.00
Z1177:Fras1	UTSW	5	96700251	missense	possibly damaging	0.71
Z1177:Fras1	UTSW	5	96740811	missense	probably benign	0.18
Z1177:Fras1	UTSW	5	96740983	missense	possibly damaging	0.95
Z1177:Fras1	UTSW	5	96758142	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- AAACCTAGCATTTCAGGAGCC -3'
(R):5'- TGCCTAAGGTGAAGTGAATGTCAG -3'

Sequencing Primer
(F):5'- GGAGCCCTGGAACCAGCTTATATC -3'
(R):5'- TGAATGTCAGAAGTCCTGCAC -3'

Posted On

2015-11-11