Mutagenetix > Incidental Mutation

Incidental Mutation 'R4761:Slc17a7'

356879

Institutional Source

Beutler Lab

Gene Symbol

Slc17a7

Ensembl Gene

ENSMUSG00000070570

Gene Name

solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7

Synonyms

2900052E22Rik, Vglut1

MMRRC Submission

042402-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.476) question?

Stock #

R4761 (G1)

Quality Score

188

Status

Validated

Chromosome

Chromosomal Location

44813373-44825566 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 44820408 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Isoleucine at position 313 (V313I)

Ref Sequence

ENSEMBL: ENSMUSP00000147661 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000085374] [ENSMUST00000209634]

AlphaFold

Q3TXX4

Predicted Effect

probably benign
Transcript: ENSMUST00000085374
AA Change: V288I

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000082489
Gene: ENSMUSG00000070570
AA Change: V288I

Domain	Start	End	E-Value	Type
low complexity region	9	23	N/A	INTRINSIC
Pfam:MFS_1	68	453	9.3e-49	PFAM
transmembrane domain	468	490	N/A	INTRINSIC
low complexity region	525	539	N/A	INTRINSIC
low complexity region	550	556	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000197423

Predicted Effect

probably benign
Transcript: ENSMUST00000209634
AA Change: V313I

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000210498

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000210540

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000211652

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 96.8%
20x: 94.1%

Validation Efficiency

100% (69/69)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a vesicle-bound, sodium-dependent phosphate transporter that is specifically expressed in the neuron-rich regions of the brain. It is preferentially associated with the membranes of synaptic vesicles and functions in glutamate transport. The protein shares 82% identity with the differentiation-associated Na-dependent inorganic phosphate cotransporter and they appear to form a distinct class within the Na+/Pi cotransporter family. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous mutant mice are small and fail to thrive by 3-4 weeks of age. Abnormal excitatory post synaptic potential and currents. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9630041A04Rik	A	G	9: 101,820,165 (GRCm39)	D195G	possibly damaging	Het
Abcc8	G	A	7: 45,762,499 (GRCm39)	R1221C	probably damaging	Het
Adra1a	T	A	14: 66,964,880 (GRCm39)		probably null	Het
Akr1c6	A	T	13: 4,497,010 (GRCm39)	M98L	probably benign	Het
Alpk3	A	G	7: 80,753,916 (GRCm39)	Q1632R	probably damaging	Het
Arhgap24	G	T	5: 102,812,080 (GRCm39)		probably benign	Het
Atp8b5	A	G	4: 43,308,504 (GRCm39)	*40W	probably null	Het
Bdkrb2	A	T	12: 105,554,537 (GRCm39)	M17L	probably benign	Het
C4bp	T	C	1: 130,581,158 (GRCm39)	K117R	possibly damaging	Het
Cacng3	A	T	7: 122,367,887 (GRCm39)	T256S	probably benign	Het
Cep63	T	C	9: 102,464,240 (GRCm39)		probably benign	Het
Ces2b	T	A	8: 105,563,193 (GRCm39)		probably null	Het
Col12a1	T	A	9: 79,564,592 (GRCm39)	D1696V	probably benign	Het
Cybb	C	G	X: 9,316,989 (GRCm39)	D246H	probably benign	Het
Dcst1	A	T	3: 89,264,860 (GRCm39)	M296K	possibly damaging	Het
Ehbp1l1	G	A	19: 5,769,875 (GRCm39)	P476L	possibly damaging	Het
Enpp1	A	G	10: 24,517,849 (GRCm39)	V858A	possibly damaging	Het
Ermp1	T	A	19: 29,623,656 (GRCm39)	E55D	probably benign	Het
Eya1	G	A	1: 14,373,045 (GRCm39)	L25F	probably damaging	Het
Foxn2	T	A	17: 88,770,136 (GRCm39)		probably null	Het
Gabrb3	A	T	7: 57,415,250 (GRCm39)	T107S	probably damaging	Het
Gm26678	A	T	3: 54,540,564 (GRCm39)		noncoding transcript	Het
Gm7897	G	T	1: 173,657,536 (GRCm39)		noncoding transcript	Het
Gm9789	A	T	16: 88,954,915 (GRCm39)	Y8F	unknown	Het
Gsta3	A	T	1: 21,330,381 (GRCm39)	T78S	probably benign	Het
H2-Ab1	A	G	17: 34,486,474 (GRCm39)	N178D	probably damaging	Het
Herc6	G	A	6: 57,639,885 (GRCm39)	V1000I	probably benign	Het
Hrnr	A	C	3: 93,230,062 (GRCm39)	K100T	probably damaging	Het
Ift57	T	C	16: 49,522,263 (GRCm39)	F2L	probably damaging	Het
Iqca1l	A	G	5: 24,756,981 (GRCm39)	V232A	probably benign	Het
Kmt2a	C	A	9: 44,760,421 (GRCm39)	R509L	probably damaging	Het
Lefty1	T	A	1: 180,765,190 (GRCm39)	C253S	probably benign	Het
Lhx3	TCCTACGGGCCGGCCC	TCC	2: 26,091,435 (GRCm39)		probably null	Het
Mfsd9	T	C	1: 40,813,635 (GRCm39)	K227E	possibly damaging	Het
Mrps2	C	G	2: 28,359,946 (GRCm39)	H268D	probably benign	Het
Mrps27	T	A	13: 99,548,739 (GRCm39)	S292T	probably benign	Het
Ncaph	T	C	2: 126,948,036 (GRCm39)	D683G	probably benign	Het
Nlrc3	A	T	16: 3,781,514 (GRCm39)	S632T	probably damaging	Het
Nsun6	T	C	2: 15,034,872 (GRCm39)	T198A	possibly damaging	Het
Oasl2	C	T	5: 115,037,836 (GRCm39)	H78Y	probably benign	Het
Or8b54	T	C	9: 38,687,133 (GRCm39)	V194A	probably benign	Het
Pcsk5	T	C	19: 17,814,512 (GRCm39)	D2G	possibly damaging	Het
Pdgfrb	C	A	18: 61,212,772 (GRCm39)	S892Y	probably damaging	Het
Phf8-ps	A	T	17: 33,286,172 (GRCm39)	V210D	probably damaging	Het
Por	T	G	5: 135,754,784 (GRCm39)		probably benign	Het
Ppp2r5e	A	T	12: 75,640,035 (GRCm39)	V22D	possibly damaging	Het
Prcp	A	G	7: 92,566,933 (GRCm39)		probably null	Het
Ptchd3	A	T	11: 121,727,224 (GRCm39)	N366I	possibly damaging	Het
Rprd1b	A	G	2: 157,889,890 (GRCm39)	E4G	probably damaging	Het
Semp2l1	A	T	1: 32,585,588 (GRCm39)	S107R	possibly damaging	Het
Serpinb6d	C	A	13: 33,855,250 (GRCm39)	S308Y	probably damaging	Het
Slc12a7	T	C	13: 73,961,708 (GRCm39)	V1026A	probably benign	Het
Slc35c1	T	A	2: 92,289,168 (GRCm39)	M113L	probably damaging	Het
Smgc	A	G	15: 91,729,717 (GRCm39)	T178A	possibly damaging	Het
Spef2	A	T	15: 9,653,040 (GRCm39)	W914R	probably damaging	Het
Srfbp1	C	A	18: 52,621,638 (GRCm39)	P233Q	probably damaging	Het
Swt1	A	C	1: 151,276,853 (GRCm39)	C508G	probably benign	Het
Tex22	T	C	12: 113,052,386 (GRCm39)	V148A	possibly damaging	Het
Tle7	A	T	8: 110,836,753 (GRCm39)	D213V	probably damaging	Het
Tpd52	G	A	3: 9,028,933 (GRCm39)	P37L	probably damaging	Het
Utp25	T	C	1: 192,796,230 (GRCm39)	Y145C	probably damaging	Het
Vmn1r197	A	T	13: 22,512,174 (GRCm39)	M32L	probably benign	Het
Vmn2r100	T	C	17: 19,741,630 (GRCm39)	F114S	possibly damaging	Het
Xdh	T	A	17: 74,217,262 (GRCm39)	I669F	possibly damaging	Het
Zfp940	G	A	7: 29,545,578 (GRCm39)	R110C	probably benign	Het

Other mutations in Slc17a7

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02208:Slc17a7	APN	7	44,820,367 (GRCm39)	missense	probably damaging	1.00
IGL02536:Slc17a7	APN	7	44,820,370 (GRCm39)	missense	probably damaging	1.00
IGL03057:Slc17a7	APN	7	44,820,363 (GRCm39)	missense	probably damaging	0.98
R0081:Slc17a7	UTSW	7	44,824,371 (GRCm39)	missense	probably benign	0.00
R1188:Slc17a7	UTSW	7	44,819,311 (GRCm39)	missense	possibly damaging	0.80
R1713:Slc17a7	UTSW	7	44,819,728 (GRCm39)	missense	probably benign	0.05
R2512:Slc17a7	UTSW	7	44,818,288 (GRCm39)	missense	probably damaging	1.00
R3915:Slc17a7	UTSW	7	44,818,144 (GRCm39)	missense	probably damaging	0.97
R3972:Slc17a7	UTSW	7	44,819,334 (GRCm39)	missense	possibly damaging	0.46
R4727:Slc17a7	UTSW	7	44,822,358 (GRCm39)	missense	possibly damaging	0.64
R6047:Slc17a7	UTSW	7	44,822,830 (GRCm39)	missense	probably benign	0.07
R6113:Slc17a7	UTSW	7	44,824,175 (GRCm39)	missense	possibly damaging	0.67
R6407:Slc17a7	UTSW	7	44,819,350 (GRCm39)	missense	probably benign	0.44
R6792:Slc17a7	UTSW	7	44,824,299 (GRCm39)	missense	possibly damaging	0.50
R7404:Slc17a7	UTSW	7	44,822,354 (GRCm39)	missense	probably benign	0.32
R8001:Slc17a7	UTSW	7	44,818,212 (GRCm39)	missense	probably benign	0.02
R8152:Slc17a7	UTSW	7	44,819,714 (GRCm39)	missense	probably damaging	1.00
R8177:Slc17a7	UTSW	7	44,824,356 (GRCm39)	missense	probably benign	0.08
R9150:Slc17a7	UTSW	7	44,820,167 (GRCm39)	missense	probably damaging	1.00
R9486:Slc17a7	UTSW	7	44,821,606 (GRCm39)	missense	possibly damaging	0.90
X0067:Slc17a7	UTSW	7	44,819,696 (GRCm39)	missense	possibly damaging	0.94
Z1177:Slc17a7	UTSW	7	44,822,351 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- TGGCTGAGCAAGTCTGGATG -3'
(R):5'- CCTAATATGGAATCTAGCCCAGC -3'

Sequencing Primer
(F):5'- TGAGCAAGTCTGGATGTCACC -3'
(R):5'- ATGCATGCTAGGCAGATGCTC -3'

Posted On

2015-11-11