Incidental Mutation 'R0403:Sema6a'
| ID |
35745 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Sema6a
|
| Ensembl Gene |
ENSMUSG00000019647 |
| Gene Name |
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A |
| Synonyms |
VIa, Semaq, Sema6A-1, sema, A730020P05Rik |
| MMRRC Submission |
038608-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R0403 (G1)
|
| Quality Score |
153 |
|
Status
|
Validated
|
| Chromosome |
18 |
| Chromosomal Location |
47378321-47504267 bp(-) (GRCm39) |
| Type of Mutation |
splice site (1849 bp from exon) |
| DNA Base Change (assembly) |
G to A
at 47423112 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000118655
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000019791]
[ENSMUST00000076043]
[ENSMUST00000115449]
[ENSMUST00000126684]
[ENSMUST00000135790]
[ENSMUST00000156422]
|
| AlphaFold |
O35464 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000019791
AA Change: A298V
PolyPhen 2
Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000019791
Gene: ENSMUSG00000019647
AA Change: A298V
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
Sema
|
56 |
487 |
1.06e-185 |
SMART |
|
PSI
|
514 |
569 |
9.57e-1 |
SMART |
|
transmembrane domain
|
648 |
670 |
N/A |
INTRINSIC |
|
low complexity region
|
932 |
951 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000076043
AA Change: A298V
PolyPhen 2
Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000075420
Gene: ENSMUSG00000019647
AA Change: A298V
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
Sema
|
56 |
487 |
1.06e-185 |
SMART |
|
PSI
|
514 |
569 |
9.57e-1 |
SMART |
|
transmembrane domain
|
593 |
615 |
N/A |
INTRINSIC |
|
low complexity region
|
877 |
896 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000115449
AA Change: A298V
PolyPhen 2
Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000111109
Gene: ENSMUSG00000019647
AA Change: A298V
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
Sema
|
56 |
461 |
1.24e-168 |
SMART |
|
PSI
|
488 |
543 |
9.57e-1 |
SMART |
|
transmembrane domain
|
622 |
644 |
N/A |
INTRINSIC |
|
low complexity region
|
906 |
925 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000126684
|
| SMART Domains |
Protein: ENSMUSP00000118655
Gene: ENSMUSG00000019647
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
Pfam:Sema
|
56 |
216 |
2.5e-51 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000135790
AA Change: A298V
PolyPhen 2
Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000120011
Gene: ENSMUSG00000019647
AA Change: A298V
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
Sema
|
56 |
487 |
1.06e-185 |
SMART |
|
PSI
|
514 |
569 |
9.57e-1 |
SMART |
|
transmembrane domain
|
665 |
687 |
N/A |
INTRINSIC |
|
low complexity region
|
949 |
968 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000141224
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000151382
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000156422
AA Change: A298V
PolyPhen 2
Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000121442
Gene: ENSMUSG00000019647
AA Change: A298V
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
|
Sema
|
56 |
487 |
1.06e-185 |
SMART |
|
PSI
|
514 |
569 |
9.57e-1 |
SMART |
|
transmembrane domain
|
648 |
670 |
N/A |
INTRINSIC |
|
low complexity region
|
932 |
951 |
N/A |
INTRINSIC |
|
| Meta Mutation Damage Score |
0.7184 |
| Coding Region Coverage |
- 1x: 98.0%
- 3x: 96.8%
- 10x: 93.2%
- 20x: 83.7%
|
| Validation Efficiency |
97% (110/113) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The transmembrane semaphorin SEMA6A is expressed in developing neural tissue and is required for proper development of the thalamocortical projection (Leighton et al., 2001 [PubMed 11242070]).[supplied by OMIM, Feb 2011]
PHENOTYPE: Mice homozygous for a gene trapped allele exhibit defects in lamina-specific neurite stratification of specific retinal neuron subtypes and disruption of the dendritic plexus organization of On but not Off starburst amacrine cells. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 105 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ace |
A |
G |
11: 105,864,706 (GRCm39) |
|
probably null |
Het |
| Adgrg3 |
C |
T |
8: 95,763,550 (GRCm39) |
L284F |
probably benign |
Het |
| Alkbh8 |
T |
A |
9: 3,385,469 (GRCm39) |
V587E |
probably damaging |
Het |
| Ap4b1 |
T |
A |
3: 103,728,712 (GRCm39) |
M590K |
probably benign |
Het |
| Ap4b1 |
T |
A |
3: 103,726,155 (GRCm39) |
C244S |
probably damaging |
Het |
| Arhgap15 |
C |
T |
2: 43,953,778 (GRCm39) |
T168I |
probably damaging |
Het |
| Atp8b1 |
A |
G |
18: 64,673,381 (GRCm39) |
V997A |
probably damaging |
Het |
| Atrn |
G |
A |
2: 130,748,779 (GRCm39) |
C100Y |
probably damaging |
Het |
| Baiap2l2 |
C |
A |
15: 79,155,416 (GRCm39) |
A151S |
probably benign |
Het |
| Baz2b |
A |
T |
2: 59,799,721 (GRCm39) |
D199E |
possibly damaging |
Het |
| Bmal2 |
T |
A |
6: 146,724,153 (GRCm39) |
H348Q |
probably damaging |
Het |
| Cblb |
A |
G |
16: 51,972,989 (GRCm39) |
D440G |
probably benign |
Het |
| Cdon |
T |
C |
9: 35,384,796 (GRCm39) |
V694A |
probably benign |
Het |
| Cep250 |
A |
T |
2: 155,834,269 (GRCm39) |
R2065W |
probably damaging |
Het |
| Ces2b |
G |
T |
8: 105,560,577 (GRCm39) |
A131S |
probably damaging |
Het |
| Chrna9 |
A |
T |
5: 66,125,235 (GRCm39) |
T59S |
possibly damaging |
Het |
| Cog3 |
T |
A |
14: 75,979,767 (GRCm39) |
|
probably benign |
Het |
| Cpa1 |
G |
A |
6: 30,641,856 (GRCm39) |
V227I |
probably benign |
Het |
| Cyp3a25 |
A |
T |
5: 145,935,323 (GRCm39) |
C98S |
probably damaging |
Het |
| D8Ertd738e |
C |
T |
8: 84,976,230 (GRCm39) |
|
probably null |
Het |
| Ddx60 |
A |
G |
8: 62,447,575 (GRCm39) |
|
probably benign |
Het |
| Dhx16 |
T |
C |
17: 36,193,942 (GRCm39) |
|
probably null |
Het |
| Dnah9 |
T |
A |
11: 65,975,615 (GRCm39) |
Q1478L |
possibly damaging |
Het |
| Dock10 |
T |
C |
1: 80,501,787 (GRCm39) |
Y1434C |
possibly damaging |
Het |
| Enpp3 |
T |
A |
10: 24,680,334 (GRCm39) |
D325V |
probably damaging |
Het |
| Entpd6 |
C |
A |
2: 150,602,090 (GRCm39) |
T194K |
possibly damaging |
Het |
| Fat2 |
A |
T |
11: 55,161,175 (GRCm39) |
V3185E |
probably benign |
Het |
| Flrt1 |
A |
G |
19: 7,073,284 (GRCm39) |
L421P |
probably benign |
Het |
| Fmn2 |
A |
T |
1: 174,521,844 (GRCm39) |
Q1292L |
probably damaging |
Het |
| Fndc1 |
T |
C |
17: 7,972,555 (GRCm39) |
D1459G |
probably damaging |
Het |
| Fndc1 |
T |
C |
17: 7,994,420 (GRCm39) |
|
probably null |
Het |
| Fzr1 |
A |
G |
10: 81,205,202 (GRCm39) |
S265P |
possibly damaging |
Het |
| Gpr142 |
G |
A |
11: 114,696,855 (GRCm39) |
V134M |
probably damaging |
Het |
| Grid2ip |
G |
T |
5: 143,343,375 (GRCm39) |
V24L |
possibly damaging |
Het |
| Herc2 |
G |
A |
7: 55,809,165 (GRCm39) |
R2555H |
probably damaging |
Het |
| Hpdl |
A |
T |
4: 116,677,676 (GRCm39) |
Y262N |
possibly damaging |
Het |
| Htr3a |
A |
G |
9: 48,819,959 (GRCm39) |
V57A |
probably damaging |
Het |
| Igfbp7 |
T |
C |
5: 77,503,438 (GRCm39) |
I186V |
probably benign |
Het |
| Itga2b |
C |
T |
11: 102,358,152 (GRCm39) |
|
probably null |
Het |
| Itgae |
A |
C |
11: 73,014,009 (GRCm39) |
D736A |
possibly damaging |
Het |
| Itpkc |
T |
A |
7: 26,907,770 (GRCm39) |
M645L |
probably benign |
Het |
| Jchain |
T |
C |
5: 88,669,237 (GRCm39) |
R139G |
probably benign |
Het |
| Kif13a |
A |
G |
13: 46,944,877 (GRCm39) |
V908A |
probably damaging |
Het |
| Kif1b |
T |
A |
4: 149,266,424 (GRCm39) |
K389* |
probably null |
Het |
| Klhl12 |
T |
C |
1: 134,413,594 (GRCm39) |
Y360H |
possibly damaging |
Het |
| Knop1 |
G |
A |
7: 118,452,276 (GRCm39) |
R148W |
probably damaging |
Het |
| Lpar1 |
T |
A |
4: 58,487,191 (GRCm39) |
N27Y |
probably damaging |
Het |
| Lpar2 |
T |
A |
8: 70,276,802 (GRCm39) |
V197D |
probably damaging |
Het |
| Lrrc74a |
A |
G |
12: 86,787,753 (GRCm39) |
N128S |
probably damaging |
Het |
| Lum |
G |
T |
10: 97,407,905 (GRCm39) |
V337F |
probably benign |
Het |
| Mag |
T |
C |
7: 30,606,405 (GRCm39) |
D344G |
probably damaging |
Het |
| Maip1 |
G |
A |
1: 57,446,355 (GRCm39) |
A142T |
probably benign |
Het |
| Mlh3 |
A |
G |
12: 85,315,742 (GRCm39) |
V148A |
possibly damaging |
Het |
| Nav3 |
A |
G |
10: 109,602,964 (GRCm39) |
V1195A |
probably damaging |
Het |
| Ncor2 |
A |
G |
5: 125,110,401 (GRCm39) |
S868P |
possibly damaging |
Het |
| Nek1 |
A |
G |
8: 61,559,889 (GRCm39) |
E907G |
probably damaging |
Het |
| Nfam1 |
G |
A |
15: 82,900,580 (GRCm39) |
T134I |
probably benign |
Het |
| Nr0b2 |
T |
C |
4: 133,281,070 (GRCm39) |
V112A |
probably damaging |
Het |
| Nrp1 |
A |
G |
8: 129,184,450 (GRCm39) |
N365S |
probably damaging |
Het |
| Nrsn2 |
T |
C |
2: 152,211,710 (GRCm39) |
Y107C |
probably damaging |
Het |
| Ntng1 |
G |
A |
3: 109,841,927 (GRCm39) |
A282V |
probably damaging |
Het |
| Nxf1 |
T |
C |
19: 8,742,392 (GRCm39) |
I337T |
probably damaging |
Het |
| Obscn |
C |
T |
11: 58,967,366 (GRCm39) |
G479D |
probably damaging |
Het |
| Oprd1 |
T |
A |
4: 131,841,079 (GRCm39) |
D293V |
probably benign |
Het |
| Or13a17 |
T |
C |
7: 140,271,222 (GRCm39) |
S135P |
possibly damaging |
Het |
| P3h2 |
T |
G |
16: 25,788,700 (GRCm39) |
N586H |
possibly damaging |
Het |
| Pcid2 |
T |
C |
8: 13,135,367 (GRCm39) |
Y214C |
probably damaging |
Het |
| Pkd1l3 |
C |
G |
8: 110,350,281 (GRCm39) |
D375E |
possibly damaging |
Het |
| Pkd1l3 |
G |
A |
8: 110,350,295 (GRCm39) |
S380N |
probably benign |
Het |
| Ppic |
C |
A |
18: 53,544,143 (GRCm39) |
G81W |
probably damaging |
Het |
| Ppp2r1a |
C |
A |
17: 21,177,303 (GRCm39) |
P246T |
probably damaging |
Het |
| Ppp4r4 |
T |
G |
12: 103,550,361 (GRCm39) |
S46A |
probably benign |
Het |
| Pramel31 |
A |
G |
4: 144,089,216 (GRCm39) |
N178S |
probably benign |
Het |
| Prkce |
A |
G |
17: 86,476,081 (GRCm39) |
T21A |
probably damaging |
Het |
| Prkg2 |
T |
C |
5: 99,142,504 (GRCm39) |
E210G |
possibly damaging |
Het |
| Prss35 |
A |
G |
9: 86,638,090 (GRCm39) |
M287V |
probably damaging |
Het |
| Psd |
G |
A |
19: 46,309,411 (GRCm39) |
|
probably benign |
Het |
| Ptch2 |
A |
T |
4: 116,968,036 (GRCm39) |
K843* |
probably null |
Het |
| Rab44 |
C |
A |
17: 29,364,235 (GRCm39) |
T603K |
probably damaging |
Het |
| Rasal3 |
T |
A |
17: 32,611,764 (GRCm39) |
|
probably null |
Het |
| Rbbp6 |
A |
G |
7: 122,591,519 (GRCm39) |
T526A |
probably damaging |
Het |
| Ros1 |
A |
T |
10: 52,019,534 (GRCm39) |
|
probably benign |
Het |
| Sec24b |
T |
A |
3: 129,783,325 (GRCm39) |
L1104F |
possibly damaging |
Het |
| Sec24b |
A |
G |
3: 129,793,183 (GRCm39) |
S685P |
probably damaging |
Het |
| Setmar |
A |
T |
6: 108,052,923 (GRCm39) |
H139L |
probably benign |
Het |
| Slc28a2b |
T |
C |
2: 122,352,335 (GRCm39) |
L364S |
probably damaging |
Het |
| Slc4a7 |
T |
C |
14: 14,766,808 (GRCm38) |
V710A |
probably benign |
Het |
| Smarcc1 |
T |
A |
9: 110,066,876 (GRCm39) |
|
probably null |
Het |
| Smchd1 |
G |
A |
17: 71,701,897 (GRCm39) |
L1032F |
probably damaging |
Het |
| Speg |
T |
C |
1: 75,407,428 (GRCm39) |
|
probably benign |
Het |
| Tasor2 |
A |
T |
13: 3,632,052 (GRCm39) |
Y816* |
probably null |
Het |
| Tcea1 |
C |
G |
1: 4,959,726 (GRCm39) |
R134G |
probably benign |
Het |
| Tchhl1 |
C |
T |
3: 93,378,336 (GRCm39) |
Q347* |
probably null |
Het |
| Tecrl |
A |
T |
5: 83,502,605 (GRCm39) |
|
probably benign |
Het |
| Tepsin |
T |
C |
11: 119,984,508 (GRCm39) |
|
probably benign |
Het |
| Tmem40 |
G |
A |
6: 115,710,946 (GRCm39) |
|
probably benign |
Het |
| Tpr |
G |
A |
1: 150,283,165 (GRCm39) |
|
probably benign |
Het |
| Ttll12 |
A |
T |
15: 83,464,859 (GRCm39) |
|
probably benign |
Het |
| Ttn |
T |
A |
2: 76,739,952 (GRCm39) |
D3529V |
probably benign |
Het |
| Usp34 |
T |
A |
11: 23,283,838 (GRCm39) |
H177Q |
possibly damaging |
Het |
| Vsig10 |
T |
A |
5: 117,476,526 (GRCm39) |
S327T |
probably benign |
Het |
| Zbtb4 |
T |
A |
11: 69,668,465 (GRCm39) |
M396K |
probably damaging |
Het |
| Zfp352 |
C |
T |
4: 90,113,246 (GRCm39) |
T462I |
possibly damaging |
Het |
| Zfp385b |
T |
C |
2: 77,307,189 (GRCm39) |
M145V |
probably damaging |
Het |
| Zfp780b |
C |
A |
7: 27,671,114 (GRCm39) |
V65F |
possibly damaging |
Het |
|
| Other mutations in Sema6a |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00336:Sema6a
|
APN |
18 |
47,423,042 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL01351:Sema6a
|
APN |
18 |
47,414,369 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
IGL01594:Sema6a
|
APN |
18 |
47,381,884 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01953:Sema6a
|
APN |
18 |
47,423,187 (GRCm39) |
nonsense |
probably null |
|
|
IGL02077:Sema6a
|
APN |
18 |
47,416,465 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL02632:Sema6a
|
APN |
18 |
47,423,222 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02957:Sema6a
|
APN |
18 |
47,382,291 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03013:Sema6a
|
APN |
18 |
47,381,461 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL03279:Sema6a
|
APN |
18 |
47,433,157 (GRCm39) |
nonsense |
probably null |
|
|
saphire
|
UTSW |
18 |
47,439,496 (GRCm39) |
nonsense |
probably null |
|
|
IGL02988:Sema6a
|
UTSW |
18 |
47,431,281 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0114:Sema6a
|
UTSW |
18 |
47,423,244 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0311:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0312:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0347:Sema6a
|
UTSW |
18 |
47,424,196 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0350:Sema6a
|
UTSW |
18 |
47,403,785 (GRCm39) |
missense |
probably benign |
|
|
R0366:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0368:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0391:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0466:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0515:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0517:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0542:Sema6a
|
UTSW |
18 |
47,381,643 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0557:Sema6a
|
UTSW |
18 |
47,382,567 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0569:Sema6a
|
UTSW |
18 |
47,403,872 (GRCm39) |
splice site |
probably null |
|
|
R0650:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0689:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0694:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0726:Sema6a
|
UTSW |
18 |
47,425,048 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0741:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0821:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0824:Sema6a
|
UTSW |
18 |
47,423,112 (GRCm39) |
splice site |
probably null |
|
|
R0924:Sema6a
|
UTSW |
18 |
47,381,559 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1108:Sema6a
|
UTSW |
18 |
47,439,498 (GRCm39) |
missense |
probably benign |
0.02 |
|
R1255:Sema6a
|
UTSW |
18 |
47,382,366 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1422:Sema6a
|
UTSW |
18 |
47,439,498 (GRCm39) |
missense |
probably benign |
0.02 |
|
R1531:Sema6a
|
UTSW |
18 |
47,382,066 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1707:Sema6a
|
UTSW |
18 |
47,416,512 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1746:Sema6a
|
UTSW |
18 |
47,439,416 (GRCm39) |
splice site |
probably benign |
|
|
R1807:Sema6a
|
UTSW |
18 |
47,409,491 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R1974:Sema6a
|
UTSW |
18 |
47,403,696 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1987:Sema6a
|
UTSW |
18 |
47,433,209 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2044:Sema6a
|
UTSW |
18 |
47,439,496 (GRCm39) |
nonsense |
probably null |
|
|
R3719:Sema6a
|
UTSW |
18 |
47,382,144 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4491:Sema6a
|
UTSW |
18 |
47,439,524 (GRCm39) |
utr 5 prime |
probably benign |
|
|
R4552:Sema6a
|
UTSW |
18 |
47,424,990 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4707:Sema6a
|
UTSW |
18 |
47,381,779 (GRCm39) |
missense |
probably benign |
0.43 |
|
R4710:Sema6a
|
UTSW |
18 |
47,403,750 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4713:Sema6a
|
UTSW |
18 |
47,382,363 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
R4963:Sema6a
|
UTSW |
18 |
47,431,318 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R5088:Sema6a
|
UTSW |
18 |
47,382,196 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5133:Sema6a
|
UTSW |
18 |
47,433,195 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5135:Sema6a
|
UTSW |
18 |
47,424,239 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5141:Sema6a
|
UTSW |
18 |
47,381,455 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5277:Sema6a
|
UTSW |
18 |
47,409,611 (GRCm39) |
intron |
probably benign |
|
|
R5551:Sema6a
|
UTSW |
18 |
47,381,595 (GRCm39) |
missense |
possibly damaging |
0.76 |
|
R5618:Sema6a
|
UTSW |
18 |
47,415,015 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5717:Sema6a
|
UTSW |
18 |
47,382,330 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5729:Sema6a
|
UTSW |
18 |
47,414,410 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5779:Sema6a
|
UTSW |
18 |
47,381,893 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5917:Sema6a
|
UTSW |
18 |
47,414,405 (GRCm39) |
missense |
probably benign |
0.05 |
|
R6054:Sema6a
|
UTSW |
18 |
47,416,470 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R6142:Sema6a
|
UTSW |
18 |
47,414,266 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6209:Sema6a
|
UTSW |
18 |
47,431,369 (GRCm39) |
splice site |
probably null |
|
|
R6307:Sema6a
|
UTSW |
18 |
47,382,231 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6734:Sema6a
|
UTSW |
18 |
47,412,236 (GRCm39) |
missense |
probably benign |
0.31 |
|
R7014:Sema6a
|
UTSW |
18 |
47,431,284 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7033:Sema6a
|
UTSW |
18 |
47,381,637 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R7574:Sema6a
|
UTSW |
18 |
47,424,231 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8054:Sema6a
|
UTSW |
18 |
47,424,972 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8250:Sema6a
|
UTSW |
18 |
47,423,182 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8408:Sema6a
|
UTSW |
18 |
47,381,958 (GRCm39) |
missense |
probably benign |
0.34 |
|
R8411:Sema6a
|
UTSW |
18 |
47,382,022 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8900:Sema6a
|
UTSW |
18 |
47,424,182 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9140:Sema6a
|
UTSW |
18 |
47,415,009 (GRCm39) |
missense |
probably benign |
|
|
R9158:Sema6a
|
UTSW |
18 |
47,431,330 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9488:Sema6a
|
UTSW |
18 |
47,437,216 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9565:Sema6a
|
UTSW |
18 |
47,382,594 (GRCm39) |
missense |
probably null |
1.00 |
|
R9652:Sema6a
|
UTSW |
18 |
47,382,252 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9732:Sema6a
|
UTSW |
18 |
47,381,925 (GRCm39) |
missense |
probably damaging |
0.96 |
|
X0065:Sema6a
|
UTSW |
18 |
47,416,386 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
| Predicted Primers |
PCR Primer
(F):5'- ACTGACTACCTGGTCCAGGCAAAG -3'
(R):5'- GATTGCGTCATTAAGCAGAGGCAAC -3'
Sequencing Primer
(F):5'- GTCCAGGCAAAGGAATGTTTTAATC -3'
(R):5'- CAGAGGCAACTTCTTCTAAGGTC -3'
|
| Posted On |
2013-05-09 |
Incidental Mutation