Mutagenetix > Incidental Mutation

Incidental Mutation 'R0332:Aggf1'

35945

Institutional Source

Beutler Lab

Gene Symbol

Aggf1

Ensembl Gene

ENSMUSG00000021681

Gene Name

angiogenic factor with G patch and FHA domains 1

Synonyms

2310029P06Rik, 2010009L17Rik, VG5Q

MMRRC Submission

038541-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.499) question?

Stock #

R0332 (G1)

Quality Score

160

Status

Validated

Chromosome

Chromosomal Location

95487191-95511860 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 95505954 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 211 (E211G)

Ref Sequence

ENSEMBL: ENSMUSP00000022189 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000022189]

AlphaFold

Q7TN31

Predicted Effect

probably damaging
Transcript: ENSMUST00000022189
AA Change: E211G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000022189
Gene: ENSMUSG00000021681
AA Change: E211G

Domain	Start	End	E-Value	Type
coiled coil region	20	85	N/A	INTRINSIC
low complexity region	128	137	N/A	INTRINSIC
low complexity region	184	201	N/A	INTRINSIC
internal_repeat_1	205	225	4.68e-9	PROSPERO
internal_repeat_1	221	241	4.68e-9	PROSPERO
low complexity region	270	280	N/A	INTRINSIC
low complexity region	356	370	N/A	INTRINSIC
low complexity region	380	401	N/A	INTRINSIC
FHA	430	484	1.51e-9	SMART
low complexity region	548	561	N/A	INTRINSIC
G_patch	614	660	1.31e-12	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000161671

Meta Mutation Damage Score

0.2466

Coding Region Coverage

1x: 99.3%
3x: 98.6%
10x: 96.9%
20x: 94.6%

Validation Efficiency

100% (63/63)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an angiogenic factor that promotes proliferation of endothelial cells. Mutations in this gene are associated with a susceptibility to Klippel-Trenaunay syndrome. Pseudogenes of this gene are found on chromosomes 3, 4, 10 and 16.[provided by RefSeq, Sep 2010]
PHENOTYPE: Homozygous null embryos die before E8.5. Heterozygotes exhibit defective angiogenesis in yolk sacs and embryos and partial lethality. Surviving adults show hemorrhages, increased vascular permeability, and reduced tumor growth of implanted melanoma cell lines. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aox3	A	G	1: 58,181,910 (GRCm39)	N299S	probably benign	Het
Arhgef7	T	A	8: 11,874,701 (GRCm39)	Y777*	probably null	Het
Atad1	A	G	19: 32,679,934 (GRCm39)		probably benign	Het
Bltp3a	T	C	17: 28,112,268 (GRCm39)		probably null	Het
Bop1	A	G	15: 76,340,187 (GRCm39)	Y130H	probably damaging	Het
Ccar2	G	T	14: 70,379,384 (GRCm39)		probably benign	Het
Ccdc110	G	T	8: 46,396,001 (GRCm39)	E631*	probably null	Het
Cfap54	C	T	10: 92,871,319 (GRCm39)	D634N	probably damaging	Het
Cldn8	C	T	16: 88,359,246 (GRCm39)		silent	Het
Cstf3	G	T	2: 104,476,812 (GRCm39)		probably null	Het
Dgkq	T	C	5: 108,802,965 (GRCm39)		probably benign	Het
Dsp	T	A	13: 38,366,204 (GRCm39)	L546*	probably null	Het
Eif3g	A	T	9: 20,809,280 (GRCm39)		probably benign	Het
Fam228a	T	A	12: 4,785,018 (GRCm39)	I38F	probably damaging	Het
Fto	A	T	8: 92,128,518 (GRCm39)		probably benign	Het
Gcnt4	G	T	13: 97,083,018 (GRCm39)	V105L	probably benign	Het
Gm10644	A	G	8: 84,660,210 (GRCm39)	L45S	possibly damaging	Het
Gm7275	A	T	16: 47,894,132 (GRCm39)		noncoding transcript	Het
Gm7579	T	C	7: 141,766,112 (GRCm39)	S173P	unknown	Het
Gpatch8	T	C	11: 102,372,668 (GRCm39)	N290S	unknown	Het
Grep1	A	T	17: 23,933,578 (GRCm39)		probably benign	Het
Hspb8	T	A	5: 116,547,532 (GRCm39)	D150V	probably damaging	Het
Ifitm1	T	C	7: 140,548,366 (GRCm39)		probably benign	Het
Ifnl2	T	C	7: 28,208,756 (GRCm39)	T99A	possibly damaging	Het
Ints4	T	C	7: 97,166,925 (GRCm39)	L577P	probably damaging	Het
Jph4	T	C	14: 55,351,467 (GRCm39)	E183G	possibly damaging	Het
Loxhd1	T	A	18: 77,471,526 (GRCm39)		probably null	Het
Mug1	G	A	6: 121,826,856 (GRCm39)		probably null	Het
Nlrp2	C	A	7: 5,320,629 (GRCm39)	C836F	probably damaging	Het
Nup210l	G	T	3: 90,039,616 (GRCm39)		probably benign	Het
Optn	C	T	2: 5,028,926 (GRCm39)	G526R	probably damaging	Het
Or51h1	A	T	7: 102,308,672 (GRCm39)	I215F	probably damaging	Het
Or7e178	A	G	9: 20,225,352 (GRCm39)	L288S	probably benign	Het
Phykpl	A	G	11: 51,477,502 (GRCm39)	E98G	probably benign	Het
Pikfyve	A	G	1: 65,303,558 (GRCm39)	N1648D	probably benign	Het
Plppr5	A	T	3: 117,465,581 (GRCm39)	R277S	probably benign	Het
Ppp1r36	T	A	12: 76,474,677 (GRCm39)	F86L	probably benign	Het
Ptgis	A	T	2: 167,056,753 (GRCm39)	L278Q	probably damaging	Het
Rasa2	A	T	9: 96,488,229 (GRCm39)	F90Y	probably damaging	Het
Setd3	T	C	12: 108,073,838 (GRCm39)	K480E	probably benign	Het
Slc66a1	C	T	4: 139,027,610 (GRCm39)	S244N	possibly damaging	Het
Snx2	T	C	18: 53,345,983 (GRCm39)	F389L	probably benign	Het
Sulf2	G	A	2: 165,931,119 (GRCm39)	T296M	probably benign	Het
Supt16	A	T	14: 52,418,614 (GRCm39)	H214Q	probably damaging	Het
Tbx4	A	T	11: 85,789,356 (GRCm39)	M12L	probably benign	Het
Tlk1	A	T	2: 70,575,909 (GRCm39)		probably null	Het
Tmprss7	C	T	16: 45,501,001 (GRCm39)	V267M	probably benign	Het
Tmub2	G	A	11: 102,179,174 (GRCm39)	R291H	probably damaging	Het
Trpm2	A	T	10: 77,783,822 (GRCm39)	V217E	probably damaging	Het
Try10	T	A	6: 41,331,154 (GRCm39)	V10E	probably benign	Het
Ttn	A	G	2: 76,596,226 (GRCm39)	V20229A	probably benign	Het
Ttn	A	C	2: 76,608,538 (GRCm39)		probably null	Het
Usf2	T	A	7: 30,654,604 (GRCm39)	M199L	possibly damaging	Het
Usp37	A	T	1: 74,534,869 (GRCm39)	S26T	possibly damaging	Het
Vrk1	G	C	12: 106,024,884 (GRCm39)	Q253H	probably benign	Het
Wdr72	A	T	9: 74,064,534 (GRCm39)		probably null	Het
Xrra1	T	C	7: 99,525,449 (GRCm39)	F123L	probably damaging	Het
Zfhx3	T	C	8: 109,673,255 (GRCm39)	I1435T	probably damaging	Het
Zfp712	T	A	13: 67,188,877 (GRCm39)	H550L	probably damaging	Het

Other mutations in Aggf1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00835:Aggf1	APN	13	95,498,985 (GRCm39)	missense	probably damaging	1.00
IGL01083:Aggf1	APN	13	95,492,917 (GRCm39)	missense	probably damaging	1.00
IGL01296:Aggf1	APN	13	95,490,479 (GRCm39)	missense	probably damaging	1.00
IGL01811:Aggf1	APN	13	95,488,080 (GRCm39)	missense	probably benign	0.04
IGL02089:Aggf1	APN	13	95,507,437 (GRCm39)	missense	probably benign	0.22
IGL02351:Aggf1	APN	13	95,489,358 (GRCm39)	splice site	probably benign
IGL02358:Aggf1	APN	13	95,489,358 (GRCm39)	splice site	probably benign
IGL02534:Aggf1	APN	13	95,506,030 (GRCm39)	missense	possibly damaging	0.76
PIT4687001:Aggf1	UTSW	13	95,501,383 (GRCm39)	missense	probably damaging	0.99
R0090:Aggf1	UTSW	13	95,501,467 (GRCm39)	missense	probably benign	0.01
R0189:Aggf1	UTSW	13	95,492,988 (GRCm39)	splice site	probably benign
R0334:Aggf1	UTSW	13	95,508,105 (GRCm39)	missense	probably benign	0.02
R0445:Aggf1	UTSW	13	95,490,509 (GRCm39)	missense	possibly damaging	0.74
R0523:Aggf1	UTSW	13	95,492,924 (GRCm39)	missense	probably damaging	0.99
R0575:Aggf1	UTSW	13	95,504,905 (GRCm39)	missense	probably benign	0.02
R0647:Aggf1	UTSW	13	95,508,164 (GRCm39)	splice site	probably null
R1401:Aggf1	UTSW	13	95,501,356 (GRCm39)	missense	probably benign	0.02
R1495:Aggf1	UTSW	13	95,492,921 (GRCm39)	nonsense	probably null
R1542:Aggf1	UTSW	13	95,507,450 (GRCm39)	missense	probably benign	0.00
R1688:Aggf1	UTSW	13	95,501,275 (GRCm39)	missense	probably damaging	1.00
R2225:Aggf1	UTSW	13	95,507,354 (GRCm39)	missense	probably damaging	0.96
R2226:Aggf1	UTSW	13	95,507,354 (GRCm39)	missense	probably damaging	0.96
R4405:Aggf1	UTSW	13	95,508,102 (GRCm39)	missense	probably benign	0.00
R4764:Aggf1	UTSW	13	95,501,221 (GRCm39)	missense	probably damaging	0.96
R5819:Aggf1	UTSW	13	95,488,129 (GRCm39)	missense	possibly damaging	0.76
R5878:Aggf1	UTSW	13	95,506,065 (GRCm39)	missense	probably benign	0.18
R5946:Aggf1	UTSW	13	95,508,084 (GRCm39)	missense	probably damaging	1.00
R6056:Aggf1	UTSW	13	95,508,123 (GRCm39)	missense	probably benign	0.00
R6823:Aggf1	UTSW	13	95,501,231 (GRCm39)	missense	probably benign	0.11
R7051:Aggf1	UTSW	13	95,488,125 (GRCm39)	missense	possibly damaging	0.94
R7638:Aggf1	UTSW	13	95,492,921 (GRCm39)	nonsense	probably null
R7682:Aggf1	UTSW	13	95,504,934 (GRCm39)	missense	probably benign	0.41
R7903:Aggf1	UTSW	13	95,492,966 (GRCm39)	missense	probably damaging	1.00
R9387:Aggf1	UTSW	13	95,507,461 (GRCm39)	missense	probably damaging	1.00
R9502:Aggf1	UTSW	13	95,507,450 (GRCm39)	missense	probably benign	0.00
RF014:Aggf1	UTSW	13	95,507,276 (GRCm39)	missense	possibly damaging	0.87
X0010:Aggf1	UTSW	13	95,501,485 (GRCm39)	missense	probably benign
X0064:Aggf1	UTSW	13	95,499,378 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TAAGCAAGGAGACTGAGCCCCTAC -3'
(R):5'- TGCAGCTCATGGAACAGCACTG -3'

Sequencing Primer
(F):5'- GGTGTTAGTTACCAAGTCCACAG -3'
(R):5'- CGATGCGTTTCCATTACAAACTG -3'

Posted On

2013-05-09