Incidental Mutation 'IGL02813:Gpat2'
ID 360658
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Gpat2
Ensembl Gene ENSMUSG00000046338
Gene Name glycerol-3-phosphate acyltransferase 2, mitochondrial
Synonyms A530057A03Rik, Gpat2
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL02813
Quality Score
Status
Chromosome 2
Chromosomal Location 127267119-127278012 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 127276375 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 635 (V635A)
Ref Sequence ENSEMBL: ENSMUSP00000049619 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000028848] [ENSMUST00000062211]
AlphaFold Q14DK4
Predicted Effect probably benign
Transcript: ENSMUST00000028848
SMART Domains Protein: ENSMUSP00000028848
Gene: ENSMUSG00000027371

DomainStartEndE-ValueType
low complexity region 47 53 N/A INTRINSIC
Pfam:FAA_hydrolase 107 313 3.1e-75 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000062211
AA Change: V635A

PolyPhen 2 Score 0.902 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000049619
Gene: ENSMUSG00000046338
AA Change: V635A

DomainStartEndE-ValueType
PlsC 199 333 1.45e-11 SMART
Blast:PlsC 347 387 7e-13 BLAST
low complexity region 431 468 N/A INTRINSIC
low complexity region 515 528 N/A INTRINSIC
low complexity region 593 613 N/A INTRINSIC
low complexity region 664 675 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000123327
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137366
Predicted Effect noncoding transcript
Transcript: ENSMUST00000146437
Predicted Effect noncoding transcript
Transcript: ENSMUST00000146615
Predicted Effect noncoding transcript
Transcript: ENSMUST00000146757
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 34 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adcy1 C A 11: 7,096,591 (GRCm39) Q660K possibly damaging Het
Arhgap5 A C 12: 52,563,748 (GRCm39) T240P probably benign Het
Arhgef7 C T 8: 11,850,767 (GRCm39) probably benign Het
Cttnbp2 C A 6: 18,367,537 (GRCm39) V1594F possibly damaging Het
Cyp2a22 G T 7: 26,635,859 (GRCm39) Q235K probably benign Het
Dennd11 C T 6: 40,395,473 (GRCm39) V212I probably benign Het
Dynlt5 A G 4: 102,849,769 (GRCm39) N64S probably damaging Het
Ecm1 G A 3: 95,644,098 (GRCm39) P169S probably damaging Het
Emilin3 G A 2: 160,750,649 (GRCm39) Q320* probably null Het
Ern1 T C 11: 106,314,251 (GRCm39) D183G probably damaging Het
Gria1 A G 11: 57,174,410 (GRCm39) N564S probably damaging Het
Grtp1 A C 8: 13,236,945 (GRCm39) I173S possibly damaging Het
Hsd17b4 A G 18: 50,261,415 (GRCm39) probably benign Het
Lrp1b T C 2: 40,569,229 (GRCm39) probably null Het
Mark4 A T 7: 19,181,181 (GRCm39) probably null Het
Mphosph9 T C 5: 124,453,691 (GRCm39) D207G probably benign Het
Mrgprd A G 7: 144,875,251 (GRCm39) M41V probably benign Het
Myo1g T C 11: 6,468,743 (GRCm39) *66W probably null Het
Neto2 C A 8: 86,417,515 (GRCm39) D30Y probably benign Het
Nlrp6 A T 7: 140,503,333 (GRCm39) I450F possibly damaging Het
Nup155 T A 15: 8,159,605 (GRCm39) probably benign Het
Or4c11c A G 2: 88,661,495 (GRCm39) I11M probably benign Het
Pcdhb10 T G 18: 37,546,815 (GRCm39) S630R possibly damaging Het
Rwdd4a T C 8: 47,990,396 (GRCm39) probably null Het
Slc12a7 T A 13: 73,961,795 (GRCm39) probably benign Het
Slc22a20 C T 19: 6,034,886 (GRCm39) V192I probably benign Het
Slc9a2 T A 1: 40,781,829 (GRCm39) S353T probably damaging Het
Srgap3 A G 6: 112,708,441 (GRCm39) F753L probably damaging Het
Tcea1 C T 1: 4,956,979 (GRCm39) T93I probably benign Het
Tecpr2 A T 12: 110,899,626 (GRCm39) S665C probably damaging Het
Tor4a C A 2: 25,084,761 (GRCm39) E381* probably null Het
Vdr A G 15: 97,767,562 (GRCm39) Y143H probably benign Het
Vmn2r91 A C 17: 18,356,348 (GRCm39) T672P possibly damaging Het
Wdr41 A G 13: 95,131,753 (GRCm39) probably null Het
Other mutations in Gpat2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00326:Gpat2 APN 2 127,274,316 (GRCm39) missense probably benign 0.01
IGL00479:Gpat2 APN 2 127,276,381 (GRCm39) missense probably damaging 0.99
IGL01393:Gpat2 APN 2 127,274,571 (GRCm39) missense probably damaging 1.00
IGL01759:Gpat2 APN 2 127,272,816 (GRCm39) missense possibly damaging 0.94
IGL01764:Gpat2 APN 2 127,269,456 (GRCm39) missense probably benign 0.18
IGL02631:Gpat2 APN 2 127,276,152 (GRCm39) splice site probably benign
IGL02657:Gpat2 APN 2 127,269,251 (GRCm39) missense probably benign 0.04
IGL02873:Gpat2 APN 2 127,273,675 (GRCm39) missense probably benign 0.00
IGL02993:Gpat2 APN 2 127,269,486 (GRCm39) missense probably damaging 1.00
Hygroscopic UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
PIT4494001:Gpat2 UTSW 2 127,275,800 (GRCm39) missense probably benign 0.00
R0078:Gpat2 UTSW 2 127,270,169 (GRCm39) missense probably damaging 1.00
R0230:Gpat2 UTSW 2 127,277,765 (GRCm39) missense possibly damaging 0.95
R1619:Gpat2 UTSW 2 127,270,637 (GRCm39) missense probably benign 0.00
R1851:Gpat2 UTSW 2 127,276,739 (GRCm39) missense possibly damaging 0.77
R1939:Gpat2 UTSW 2 127,277,879 (GRCm39) makesense probably null
R2143:Gpat2 UTSW 2 127,275,682 (GRCm39) missense probably damaging 1.00
R2165:Gpat2 UTSW 2 127,270,211 (GRCm39) missense probably damaging 0.97
R2518:Gpat2 UTSW 2 127,270,211 (GRCm39) missense probably damaging 0.97
R3410:Gpat2 UTSW 2 127,270,211 (GRCm39) missense probably damaging 0.97
R3411:Gpat2 UTSW 2 127,270,211 (GRCm39) missense probably damaging 0.97
R3898:Gpat2 UTSW 2 127,277,018 (GRCm39) missense probably damaging 1.00
R4080:Gpat2 UTSW 2 127,275,542 (GRCm39) missense probably damaging 0.99
R4725:Gpat2 UTSW 2 127,273,902 (GRCm39) missense possibly damaging 0.83
R4841:Gpat2 UTSW 2 127,275,887 (GRCm39) missense probably benign 0.10
R5354:Gpat2 UTSW 2 127,270,643 (GRCm39) missense probably damaging 1.00
R5941:Gpat2 UTSW 2 127,270,195 (GRCm39) missense possibly damaging 0.53
R6362:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6374:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6375:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6377:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6380:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6381:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6382:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6383:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6384:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6393:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6565:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6594:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6595:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6649:Gpat2 UTSW 2 127,274,355 (GRCm39) missense possibly damaging 0.81
R6665:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6666:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6667:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6668:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R6669:Gpat2 UTSW 2 127,273,838 (GRCm39) missense possibly damaging 0.90
R7031:Gpat2 UTSW 2 127,277,395 (GRCm39) missense probably damaging 0.99
R7096:Gpat2 UTSW 2 127,270,209 (GRCm39) missense probably benign 0.02
R7307:Gpat2 UTSW 2 127,276,810 (GRCm39) missense probably damaging 1.00
R7313:Gpat2 UTSW 2 127,270,215 (GRCm39) missense probably damaging 0.99
R7365:Gpat2 UTSW 2 127,268,901 (GRCm39) splice site probably null
R8111:Gpat2 UTSW 2 127,275,777 (GRCm39) missense probably damaging 1.00
R8113:Gpat2 UTSW 2 127,273,267 (GRCm39) missense possibly damaging 0.52
R8729:Gpat2 UTSW 2 127,275,739 (GRCm39) missense probably damaging 0.99
R9010:Gpat2 UTSW 2 127,277,146 (GRCm39) missense probably benign 0.28
R9146:Gpat2 UTSW 2 127,273,206 (GRCm39) missense possibly damaging 0.58
Z1176:Gpat2 UTSW 2 127,275,728 (GRCm39) missense probably damaging 1.00
Z1176:Gpat2 UTSW 2 127,272,802 (GRCm39) missense probably benign
Posted On 2015-12-18