Incidental Mutation 'IGL02826:Ttbk1'
| ID |
361202 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Ttbk1
|
| Ensembl Gene |
ENSMUSG00000015599 |
| Gene Name |
tau tubulin kinase 1 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Possibly essential
(E-score: 0.589)
|
| Stock # |
IGL02826
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
17 |
| Chromosomal Location |
46442448-46487675 bp(-) (GRCm38) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 46470660 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 389
(V389A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000153386
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000047034]
[ENSMUST00000225808]
|
| AlphaFold |
Q6PCN3 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000047034
AA Change: V389A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000044580
Gene: ENSMUSG00000015599
AA Change: V389A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Pkinase_Tyr
|
34 |
293 |
3.4e-21 |
PFAM |
|
Pfam:Pkinase
|
34 |
305 |
1.7e-33 |
PFAM |
|
low complexity region
|
320 |
334 |
N/A |
INTRINSIC |
|
low complexity region
|
371 |
395 |
N/A |
INTRINSIC |
|
low complexity region
|
570 |
593 |
N/A |
INTRINSIC |
|
low complexity region
|
611 |
624 |
N/A |
INTRINSIC |
|
low complexity region
|
633 |
653 |
N/A |
INTRINSIC |
|
low complexity region
|
697 |
709 |
N/A |
INTRINSIC |
|
coiled coil region
|
729 |
776 |
N/A |
INTRINSIC |
|
low complexity region
|
779 |
797 |
N/A |
INTRINSIC |
|
low complexity region
|
893 |
913 |
N/A |
INTRINSIC |
|
low complexity region
|
945 |
962 |
N/A |
INTRINSIC |
|
low complexity region
|
1090 |
1115 |
N/A |
INTRINSIC |
|
low complexity region
|
1236 |
1251 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000181301
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000225808
AA Change: V389A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Summary:This gene belongs to the casein kinase 1 superfamily. The encoded protein is a neuron-specific, serine/threonine and tyrosine kinase, which regulates phosphorylation of tau, a protein that associates with microtubule assemblies and stabilizes them. Genetic variants in this gene are associated with Alzheimer's disease. [provided by RefSeq, Jul 2016]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 45 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1110004E09Rik |
A |
C |
16: 90,926,062 (GRCm38) |
D261E |
probably benign |
Het |
| 1810041L15Rik |
A |
G |
15: 84,420,129 (GRCm38) |
|
probably benign |
Het |
| 4930404N11Rik |
A |
G |
10: 81,364,736 (GRCm38) |
|
probably benign |
Het |
| A3galt2 |
T |
C |
4: 128,761,509 (GRCm38) |
|
probably benign |
Het |
| Alk |
C |
T |
17: 71,869,536 (GRCm38) |
G1591D |
probably damaging |
Het |
| Angptl2 |
T |
C |
2: 33,228,315 (GRCm38) |
S34P |
probably benign |
Het |
| Atp2a2 |
A |
G |
5: 122,489,291 (GRCm38) |
V137A |
probably benign |
Het |
| Atp8b5 |
A |
G |
4: 43,366,770 (GRCm38) |
M845V |
probably damaging |
Het |
| Camk1d |
A |
G |
2: 5,565,760 (GRCm38) |
V30A |
possibly damaging |
Het |
| Ceacam19 |
G |
A |
7: 19,882,610 (GRCm38) |
T193I |
probably benign |
Het |
| Chst15 |
T |
A |
7: 132,266,746 (GRCm38) |
D315V |
probably damaging |
Het |
| Cux1 |
G |
T |
5: 136,308,003 (GRCm38) |
P885Q |
probably damaging |
Het |
| Cyth1 |
C |
T |
11: 118,185,481 (GRCm38) |
E88K |
possibly damaging |
Het |
| Dido1 |
A |
G |
2: 180,683,958 (GRCm38) |
V479A |
probably benign |
Het |
| Dlc1 |
G |
T |
8: 36,570,275 (GRCm38) |
|
probably benign |
Het |
| H2-Ab1 |
G |
A |
17: 34,264,911 (GRCm38) |
R82Q |
probably damaging |
Het |
| Hps6 |
T |
A |
19: 46,006,041 (GRCm38) |
*806K |
probably null |
Het |
| Ilf3 |
T |
C |
9: 21,398,044 (GRCm38) |
S486P |
probably benign |
Het |
| Kdm1b |
C |
A |
13: 47,080,467 (GRCm38) |
T759K |
probably damaging |
Het |
| Kirrel |
C |
A |
3: 87,088,485 (GRCm38) |
V381F |
probably damaging |
Het |
| Kmt2b |
A |
T |
7: 30,577,144 (GRCm38) |
V1701E |
probably damaging |
Het |
| Lrmda |
T |
C |
14: 22,828,737 (GRCm38) |
Y100H |
probably damaging |
Het |
| Mastl |
T |
C |
2: 23,145,409 (GRCm38) |
I169V |
probably damaging |
Het |
| Mroh2b |
A |
G |
15: 4,962,148 (GRCm38) |
E1576G |
probably damaging |
Het |
| Nek3 |
A |
T |
8: 22,160,368 (GRCm38) |
|
probably null |
Het |
| Nipal3 |
G |
T |
4: 135,468,550 (GRCm38) |
Y247* |
probably null |
Het |
| Nt5e |
A |
C |
9: 88,355,705 (GRCm38) |
K229N |
probably damaging |
Het |
| Olfr237-ps1 |
A |
G |
6: 43,153,577 (GRCm38) |
I91V |
possibly damaging |
Het |
| Olfr974 |
G |
T |
9: 39,942,958 (GRCm38) |
G233C |
probably damaging |
Het |
| Opa1 |
A |
G |
16: 29,610,887 (GRCm38) |
M290V |
probably null |
Het |
| Parp2 |
T |
A |
14: 50,815,415 (GRCm38) |
I155K |
probably benign |
Het |
| Pde4dip |
G |
T |
3: 97,767,087 (GRCm38) |
A171E |
probably damaging |
Het |
| Prom2 |
C |
T |
2: 127,531,116 (GRCm38) |
E678K |
probably benign |
Het |
| Rab12 |
A |
G |
17: 66,498,116 (GRCm38) |
|
probably benign |
Het |
| Rgs8 |
A |
T |
1: 153,670,799 (GRCm38) |
T13S |
probably damaging |
Het |
| Setd3 |
A |
G |
12: 108,112,124 (GRCm38) |
|
probably benign |
Het |
| Slx4ip |
G |
A |
2: 137,004,973 (GRCm38) |
V53I |
probably damaging |
Het |
| Stil |
A |
G |
4: 115,024,098 (GRCm38) |
D613G |
probably benign |
Het |
| Tjp3 |
T |
A |
10: 81,273,689 (GRCm38) |
S858C |
probably damaging |
Het |
| Tmem215 |
A |
G |
4: 40,474,632 (GRCm38) |
*236W |
probably null |
Het |
| Wdfy4 |
A |
G |
14: 32,971,750 (GRCm38) |
F2706S |
possibly damaging |
Het |
| Xpo4 |
C |
A |
14: 57,629,420 (GRCm38) |
V222L |
possibly damaging |
Het |
| Zfc3h1 |
A |
G |
10: 115,400,904 (GRCm38) |
S428G |
probably benign |
Het |
| Zfp286 |
T |
C |
11: 62,787,960 (GRCm38) |
Q47R |
probably damaging |
Het |
| Zfp318 |
A |
G |
17: 46,398,754 (GRCm38) |
K468E |
probably damaging |
Het |
|
| Other mutations in Ttbk1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01869:Ttbk1
|
APN |
17 |
46,447,063 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL02469:Ttbk1
|
APN |
17 |
46,470,630 (GRCm38) |
missense |
possibly damaging |
0.77 |
|
IGL02874:Ttbk1
|
APN |
17 |
46,470,225 (GRCm38) |
missense |
probably benign |
0.10 |
|
IGL02948:Ttbk1
|
APN |
17 |
46,446,330 (GRCm38) |
missense |
probably benign |
0.44 |
|
IGL03037:Ttbk1
|
APN |
17 |
46,446,330 (GRCm38) |
missense |
probably benign |
0.44 |
|
R0165:Ttbk1
|
UTSW |
17 |
46,478,938 (GRCm38) |
missense |
possibly damaging |
0.70 |
|
R1186:Ttbk1
|
UTSW |
17 |
46,467,131 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1228:Ttbk1
|
UTSW |
17 |
46,476,712 (GRCm38) |
critical splice donor site |
probably null |
|
|
R1423:Ttbk1
|
UTSW |
17 |
46,446,154 (GRCm38) |
splice site |
probably benign |
|
|
R1477:Ttbk1
|
UTSW |
17 |
46,476,799 (GRCm38) |
missense |
probably benign |
0.05 |
|
R1960:Ttbk1
|
UTSW |
17 |
46,480,224 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R1961:Ttbk1
|
UTSW |
17 |
46,480,224 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R4043:Ttbk1
|
UTSW |
17 |
46,446,762 (GRCm38) |
missense |
probably benign |
0.21 |
|
R4190:Ttbk1
|
UTSW |
17 |
46,479,247 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R4192:Ttbk1
|
UTSW |
17 |
46,479,247 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R4193:Ttbk1
|
UTSW |
17 |
46,479,247 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R4660:Ttbk1
|
UTSW |
17 |
46,477,788 (GRCm38) |
nonsense |
probably null |
|
|
R5383:Ttbk1
|
UTSW |
17 |
46,467,416 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5385:Ttbk1
|
UTSW |
17 |
46,447,632 (GRCm38) |
missense |
probably benign |
0.00 |
|
R5715:Ttbk1
|
UTSW |
17 |
46,479,207 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R6218:Ttbk1
|
UTSW |
17 |
46,470,807 (GRCm38) |
missense |
possibly damaging |
0.47 |
|
R6263:Ttbk1
|
UTSW |
17 |
46,467,262 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6471:Ttbk1
|
UTSW |
17 |
46,467,277 (GRCm38) |
missense |
probably benign |
|
|
R6537:Ttbk1
|
UTSW |
17 |
46,470,310 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R6552:Ttbk1
|
UTSW |
17 |
46,478,962 (GRCm38) |
missense |
probably benign |
0.14 |
|
R7564:Ttbk1
|
UTSW |
17 |
46,476,931 (GRCm38) |
missense |
possibly damaging |
0.66 |
|
R7853:Ttbk1
|
UTSW |
17 |
46,447,343 (GRCm38) |
missense |
probably benign |
0.00 |
|
R7871:Ttbk1
|
UTSW |
17 |
46,446,238 (GRCm38) |
missense |
probably benign |
|
|
R7873:Ttbk1
|
UTSW |
17 |
46,446,568 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7908:Ttbk1
|
UTSW |
17 |
46,478,938 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8210:Ttbk1
|
UTSW |
17 |
46,480,161 (GRCm38) |
missense |
possibly damaging |
0.95 |
|
R8236:Ttbk1
|
UTSW |
17 |
46,470,729 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8754:Ttbk1
|
UTSW |
17 |
46,445,201 (GRCm38) |
nonsense |
probably null |
|
|
R8829:Ttbk1
|
UTSW |
17 |
46,446,895 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8870:Ttbk1
|
UTSW |
17 |
46,470,735 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9091:Ttbk1
|
UTSW |
17 |
46,470,591 (GRCm38) |
missense |
possibly damaging |
0.48 |
|
R9135:Ttbk1
|
UTSW |
17 |
46,479,206 (GRCm38) |
nonsense |
probably null |
|
|
R9270:Ttbk1
|
UTSW |
17 |
46,470,591 (GRCm38) |
missense |
possibly damaging |
0.48 |
|
R9605:Ttbk1
|
UTSW |
17 |
46,473,590 (GRCm38) |
missense |
possibly damaging |
0.77 |
|
R9609:Ttbk1
|
UTSW |
17 |
46,447,222 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R9617:Ttbk1
|
UTSW |
17 |
46,447,072 (GRCm38) |
missense |
probably damaging |
1.00 |
|
X0066:Ttbk1
|
UTSW |
17 |
46,446,856 (GRCm38) |
missense |
possibly damaging |
0.74 |
|
Z1088:Ttbk1
|
UTSW |
17 |
46,446,325 (GRCm38) |
missense |
probably benign |
0.35 |
|
Z1176:Ttbk1
|
UTSW |
17 |
46,460,911 (GRCm38) |
missense |
possibly damaging |
0.63 |
|
| Posted On |
2015-12-18 |
Incidental Mutation