Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02826:Nek3'

361231

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Nek3

Ensembl Gene

ENSMUSG00000031478

Gene Name

NIMA (never in mitosis gene a)-related expressed kinase 3

Synonyms

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02826

Quality Score

Status

Chromosome

Chromosomal Location

22618299-22656451 bp(-) (GRCm39)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

A to T at 22650384 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000136876 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033865] [ENSMUST00000110730] [ENSMUST00000178324]

AlphaFold

Q9R0A5

Predicted Effect

probably null
Transcript: ENSMUST00000033865

SMART Domains

Protein: ENSMUSP00000033865
Gene: ENSMUSG00000031478

Domain	Start	End	E-Value	Type
S_TKc	4	259	1.11e-89	SMART
Blast:S_TKc	267	444	8e-49	BLAST
low complexity region	471	485	N/A	INTRINSIC
low complexity region	495	506	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000110730

SMART Domains

Protein: ENSMUSP00000106358
Gene: ENSMUSG00000031478

Domain	Start	End	E-Value	Type
S_TKc	4	259	1.11e-89	SMART
Blast:S_TKc	267	446	1e-48	BLAST
low complexity region	473	487	N/A	INTRINSIC
low complexity region	497	508	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000178324

SMART Domains

Protein: ENSMUSP00000136876
Gene: ENSMUSG00000031478

Domain	Start	End	E-Value	Type
S_TKc	4	259	1.11e-89	SMART
Blast:S_TKc	267	446	1e-48	BLAST
low complexity region	473	487	N/A	INTRINSIC
low complexity region	497	508	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the NimA (never in mitosis A) family of serine/threonine protein kinases. The encoded protein differs from other NimA family members in that it is not cell cycle regulated and is found primarily in the cytoplasm. The kinase is activated by prolactin stimulation, leading to phosphorylation of VAV2 guanine nucleotide exchange factor, paxillin, and activation of the RAC1 GTPase. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Mar 2009]

Allele List at MGI

Other mutations in this stock

Total: 45 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A3galt2	T	C	4: 128,655,302 (GRCm39)		probably benign	Het
Alk	C	T	17: 72,176,531 (GRCm39)	G1591D	probably damaging	Het
Angptl2	T	C	2: 33,118,327 (GRCm39)	S34P	probably benign	Het
Atp2a2	A	G	5: 122,627,354 (GRCm39)	V137A	probably benign	Het
Atp8b5	A	G	4: 43,366,770 (GRCm39)	M845V	probably damaging	Het
Camk1d	A	G	2: 5,570,571 (GRCm39)	V30A	possibly damaging	Het
Ceacam19	G	A	7: 19,616,535 (GRCm39)	T193I	probably benign	Het
Cfap298	A	C	16: 90,722,950 (GRCm39)	D261E	probably benign	Het
Chst15	T	A	7: 131,868,475 (GRCm39)	D315V	probably damaging	Het
Cux1	G	T	5: 136,336,857 (GRCm39)	P885Q	probably damaging	Het
Cyth1	C	T	11: 118,076,307 (GRCm39)	E88K	possibly damaging	Het
Dido1	A	G	2: 180,325,751 (GRCm39)	V479A	probably benign	Het
Dlc1	G	T	8: 37,037,429 (GRCm39)		probably benign	Het
H2-Ab1	G	A	17: 34,483,885 (GRCm39)	R82Q	probably damaging	Het
Hps6	T	A	19: 45,994,480 (GRCm39)	*806K	probably null	Het
Ilf3	T	C	9: 21,309,340 (GRCm39)	S486P	probably benign	Het
Kdm1b	C	A	13: 47,233,943 (GRCm39)	T759K	probably damaging	Het
Kirrel1	C	A	3: 86,995,792 (GRCm39)	V381F	probably damaging	Het
Kmt2b	A	T	7: 30,276,569 (GRCm39)	V1701E	probably damaging	Het
Lrmda	T	C	14: 22,878,805 (GRCm39)	Y100H	probably damaging	Het
Mastl	T	C	2: 23,035,421 (GRCm39)	I169V	probably damaging	Het
Mroh2b	A	G	15: 4,991,630 (GRCm39)	E1576G	probably damaging	Het
Nipal3	G	T	4: 135,195,861 (GRCm39)	Y247*	probably null	Het
Nt5e	A	C	9: 88,237,758 (GRCm39)	K229N	probably damaging	Het
Opa1	A	G	16: 29,429,705 (GRCm39)	M290V	probably null	Het
Or2a14	A	G	6: 43,130,511 (GRCm39)	I91V	possibly damaging	Het
Or8d6	G	T	9: 39,854,254 (GRCm39)	G233C	probably damaging	Het
Parp2	T	A	14: 51,052,872 (GRCm39)	I155K	probably benign	Het
Pde4dip	G	T	3: 97,674,403 (GRCm39)	A171E	probably damaging	Het
Prom2	C	T	2: 127,373,036 (GRCm39)	E678K	probably benign	Het
Rab12	A	G	17: 66,805,111 (GRCm39)		probably benign	Het
Rgs8	A	T	1: 153,546,545 (GRCm39)	T13S	probably damaging	Het
Setd3	A	G	12: 108,078,383 (GRCm39)		probably benign	Het
Shisal1	A	G	15: 84,304,330 (GRCm39)		probably benign	Het
Slx4ip	G	A	2: 136,846,893 (GRCm39)	V53I	probably damaging	Het
Stil	A	G	4: 114,881,295 (GRCm39)	D613G	probably benign	Het
Tektip1	A	G	10: 81,200,570 (GRCm39)		probably benign	Het
Tjp3	T	A	10: 81,109,523 (GRCm39)	S858C	probably damaging	Het
Tmem215	A	G	4: 40,474,632 (GRCm39)	*236W	probably null	Het
Ttbk1	A	G	17: 46,781,586 (GRCm39)	V389A	probably benign	Het
Wdfy4	A	G	14: 32,693,707 (GRCm39)	F2706S	possibly damaging	Het
Xpo4	C	A	14: 57,866,877 (GRCm39)	V222L	possibly damaging	Het
Zfc3h1	A	G	10: 115,236,809 (GRCm39)	S428G	probably benign	Het
Zfp286	T	C	11: 62,678,786 (GRCm39)	Q47R	probably damaging	Het
Zfp318	A	G	17: 46,709,680 (GRCm39)	K468E	probably damaging	Het

Other mutations in Nek3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00569:Nek3	APN	8	22,648,722 (GRCm39)	missense	probably damaging	1.00
IGL01561:Nek3	APN	8	22,619,472 (GRCm39)	missense	probably damaging	0.97
IGL02799:Nek3	APN	8	22,648,735 (GRCm39)	splice site	probably benign
R0001:Nek3	UTSW	8	22,648,628 (GRCm39)	splice site	probably benign
R0390:Nek3	UTSW	8	22,618,745 (GRCm39)	unclassified	probably benign
R1367:Nek3	UTSW	8	22,650,377 (GRCm39)	splice site	probably benign
R1565:Nek3	UTSW	8	22,622,217 (GRCm39)	critical splice acceptor site	probably null
R1758:Nek3	UTSW	8	22,650,278 (GRCm39)	missense	probably damaging	1.00
R1924:Nek3	UTSW	8	22,647,047 (GRCm39)	missense	probably damaging	1.00
R3905:Nek3	UTSW	8	22,623,107 (GRCm39)	missense	probably benign	0.01
R4078:Nek3	UTSW	8	22,622,153 (GRCm39)	missense	probably damaging	1.00
R4089:Nek3	UTSW	8	22,639,929 (GRCm39)	missense	probably damaging	1.00
R4621:Nek3	UTSW	8	22,647,055 (GRCm39)	missense	probably damaging	1.00
R5207:Nek3	UTSW	8	22,622,243 (GRCm39)	intron	probably benign
R5432:Nek3	UTSW	8	22,638,748 (GRCm39)	splice site	probably null
R5790:Nek3	UTSW	8	22,621,314 (GRCm39)	missense	probably damaging	1.00
R5790:Nek3	UTSW	8	22,621,313 (GRCm39)	missense	probably damaging	1.00
R6856:Nek3	UTSW	8	22,619,463 (GRCm39)	missense	probably damaging	1.00
R8021:Nek3	UTSW	8	22,647,206 (GRCm39)	missense	probably damaging	1.00
R8056:Nek3	UTSW	8	22,619,359 (GRCm39)	critical splice donor site	probably null
R8129:Nek3	UTSW	8	22,639,908 (GRCm39)	missense	probably damaging	0.99
R8132:Nek3	UTSW	8	22,647,036 (GRCm39)	nonsense	probably null
R9213:Nek3	UTSW	8	22,638,677 (GRCm39)	missense	probably benign	0.00
R9708:Nek3	UTSW	8	22,618,742 (GRCm39)	missense	unknown

Posted On

2015-12-18