Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02830:Zfp54'

361369

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Zfp54

Ensembl Gene

ENSMUSG00000023882

Gene Name

zinc finger protein 54

Synonyms

Zfp-54, Zfp76, KRAB10, clone 18

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02830

Quality Score

Status

Chromosome

Chromosomal Location

21643489-21655646 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 21653718 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 71 (S71P)

Ref Sequence

ENSEMBL: ENSMUSP00000132983 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000007884] [ENSMUST00000165230] [ENSMUST00000167749]

AlphaFold

E9PW05

Predicted Effect

probably damaging
Transcript: ENSMUST00000007884
AA Change: S71P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000007884
Gene: ENSMUSG00000023882
AA Change: S71P

Domain	Start	End	E-Value	Type
KRAB	13	73	8.44e-22	SMART
ZnF_C2H2	211	233	1.69e-3	SMART
ZnF_C2H2	243	265	6.88e-4	SMART
ZnF_C2H2	271	293	2.12e-4	SMART
ZnF_C2H2	299	321	6.67e-2	SMART
ZnF_C2H2	327	349	7.67e-2	SMART
ZnF_C2H2	355	377	2.71e-2	SMART
ZnF_C2H2	383	403	6.24e0	SMART
ZnF_C2H2	411	433	5.99e-4	SMART
ZnF_C2H2	439	461	1.69e-3	SMART
ZnF_C2H2	467	489	2.43e-4	SMART
ZnF_C2H2	495	517	2.3e-5	SMART
ZnF_C2H2	523	545	8.22e-2	SMART
ZnF_C2H2	551	573	4.17e-3	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000165230
AA Change: S71P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000132983
Gene: ENSMUSG00000023882
AA Change: S71P

Domain	Start	End	E-Value	Type
KRAB	13	73	8.44e-22	SMART
ZnF_C2H2	211	233	1.69e-3	SMART
ZnF_C2H2	243	265	6.88e-4	SMART
ZnF_C2H2	271	293	2.12e-4	SMART
ZnF_C2H2	299	321	6.67e-2	SMART
ZnF_C2H2	327	349	7.67e-2	SMART
ZnF_C2H2	355	377	2.71e-2	SMART
ZnF_C2H2	383	403	6.24e0	SMART
ZnF_C2H2	411	433	5.99e-4	SMART
ZnF_C2H2	439	461	1.69e-3	SMART
ZnF_C2H2	467	489	2.43e-4	SMART
ZnF_C2H2	495	517	2.3e-5	SMART
ZnF_C2H2	523	545	8.22e-2	SMART
ZnF_C2H2	551	573	4.17e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000167749
AA Change: S71P

PolyPhen 2 Score 0.068 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000127089
Gene: ENSMUSG00000023882
AA Change: S71P

Domain	Start	End	E-Value	Type
KRAB	13	73	8.44e-22	SMART
ZnF_C2H2	211	233	1.69e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000232563

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700122O11Rik	T	A	17: 48,348,235 (GRCm39)	E67D	possibly damaging	Het
Acad11	T	A	9: 103,953,118 (GRCm39)	F116I	probably damaging	Het
Acox2	G	A	14: 8,255,298 (GRCm38)	T160I	probably damaging	Het
Anxa7	A	T	14: 20,506,608 (GRCm39)	M444K	possibly damaging	Het
Atg2a	A	G	19: 6,297,711 (GRCm39)	D423G	probably benign	Het
Cela3a	T	C	4: 137,128,946 (GRCm39)	N282S	probably benign	Het
Cyp2c50	G	A	19: 40,086,500 (GRCm39)	V296I	probably benign	Het
Fcgbpl1	C	A	7: 27,862,348 (GRCm39)	H2471Q	probably damaging	Het
Fgd3	A	G	13: 49,418,107 (GRCm39)		probably benign	Het
Gfus	C	T	15: 75,797,437 (GRCm39)	V275I	probably benign	Het
Gimap8	G	A	6: 48,633,239 (GRCm39)	A353T	probably benign	Het
Grin3a	T	A	4: 49,702,787 (GRCm39)	M900L	possibly damaging	Het
H1f0	T	G	15: 78,913,511 (GRCm39)		probably benign	Het
Heatr1	T	C	13: 12,441,093 (GRCm39)	V1456A	possibly damaging	Het
Hsd17b7	C	T	1: 169,780,649 (GRCm39)	E320K	probably damaging	Het
Kbtbd3	T	A	9: 4,330,096 (GRCm39)	S157T	possibly damaging	Het
Kif19a	C	T	11: 114,672,034 (GRCm39)	T207M	probably damaging	Het
Klc1	T	C	12: 111,743,341 (GRCm39)	Y223H	probably damaging	Het
Klhl33	C	T	14: 51,129,214 (GRCm39)	V672M	probably damaging	Het
Lrrc49	G	A	9: 60,592,393 (GRCm39)	L34F	probably damaging	Het
Nalcn	C	T	14: 123,530,881 (GRCm39)	V1386I	probably damaging	Het
Or14c39	T	G	7: 86,344,382 (GRCm39)	C239W	probably damaging	Het
Or4b13	A	T	2: 90,083,125 (GRCm39)	I69N	probably damaging	Het
Or51b6	C	T	7: 103,555,651 (GRCm39)	P2S	probably benign	Het
Or5ac19	A	G	16: 59,089,416 (GRCm39)	S205P	possibly damaging	Het
Orc5	A	T	5: 22,734,265 (GRCm39)	L173Q	probably damaging	Het
Otud4	T	G	8: 80,399,930 (GRCm39)	D880E	probably benign	Het
Pde12	T	C	14: 26,389,740 (GRCm39)	Y323C	probably damaging	Het
Pde8b	G	T	13: 95,189,409 (GRCm39)	D198E	probably benign	Het
Prom2	T	A	2: 127,376,989 (GRCm39)	I542F	possibly damaging	Het
Ptprj	G	A	2: 90,283,488 (GRCm39)	T952I	probably benign	Het
Ribc2	T	A	15: 85,016,458 (GRCm39)		probably benign	Het
Sec31b	C	T	19: 44,520,142 (GRCm39)	R214K	probably damaging	Het
Senp5	G	A	16: 31,802,303 (GRCm39)		probably benign	Het
Sh3pxd2a	G	A	19: 47,271,517 (GRCm39)	R249W	probably damaging	Het
Sorcs3	G	A	19: 48,711,441 (GRCm39)		probably null	Het
Spata31d1c	A	G	13: 65,183,180 (GRCm39)	T241A	probably benign	Het
Tac1	G	A	6: 7,555,650 (GRCm39)	V13I	probably benign	Het
Tnnc2	T	A	2: 164,619,430 (GRCm39)	D138V	probably null	Het
Tspan32	T	A	7: 142,571,329 (GRCm39)	M159K	possibly damaging	Het
Ttc28	A	T	5: 111,434,105 (GRCm39)	T2380S	probably benign	Het
Ubc	T	A	5: 125,464,377 (GRCm39)	I317F	probably damaging	Het
Usp24	T	C	4: 106,204,584 (GRCm39)	S268P	possibly damaging	Het
Vmn2r91	C	A	17: 18,356,884 (GRCm39)	H850Q	probably benign	Het
Xrn1	T	C	9: 95,900,234 (GRCm39)		probably null	Het
Zfp329	A	C	7: 12,544,043 (GRCm39)	C494G	probably damaging	Het

Other mutations in Zfp54

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00226:Zfp54	APN	17	21,653,821 (GRCm39)	missense	possibly damaging	0.62
IGL00425:Zfp54	APN	17	21,650,559 (GRCm39)	missense	probably damaging	1.00
IGL03037:Zfp54	APN	17	21,650,477 (GRCm39)	missense	probably damaging	0.99
R1853:Zfp54	UTSW	17	21,654,404 (GRCm39)	nonsense	probably null
R1855:Zfp54	UTSW	17	21,654,404 (GRCm39)	nonsense	probably null
R1915:Zfp54	UTSW	17	21,654,414 (GRCm39)	missense	probably benign
R3803:Zfp54	UTSW	17	21,653,814 (GRCm39)	missense	possibly damaging	0.58
R4430:Zfp54	UTSW	17	21,655,222 (GRCm39)	missense	probably damaging	0.98
R4724:Zfp54	UTSW	17	21,653,665 (GRCm39)	missense	probably damaging	0.96
R4799:Zfp54	UTSW	17	21,654,402 (GRCm39)	missense	probably damaging	1.00
R5197:Zfp54	UTSW	17	21,654,442 (GRCm39)	missense	probably benign	0.12
R5400:Zfp54	UTSW	17	21,653,962 (GRCm39)	missense	probably benign	0.05
R5422:Zfp54	UTSW	17	21,654,788 (GRCm39)	missense	probably benign	0.00
R5566:Zfp54	UTSW	17	21,653,706 (GRCm39)	missense	probably damaging	0.99
R6460:Zfp54	UTSW	17	21,654,004 (GRCm39)	missense	probably benign
R6528:Zfp54	UTSW	17	21,653,736 (GRCm39)	nonsense	probably null
R6876:Zfp54	UTSW	17	21,654,239 (GRCm39)	missense	probably damaging	1.00
R7296:Zfp54	UTSW	17	21,653,844 (GRCm39)	missense	probably benign	0.11
R7342:Zfp54	UTSW	17	21,648,014 (GRCm39)	start gained	probably benign
R7660:Zfp54	UTSW	17	21,654,501 (GRCm39)	missense	probably damaging	1.00
R7701:Zfp54	UTSW	17	21,654,357 (GRCm39)	missense	probably benign	0.02
R7796:Zfp54	UTSW	17	21,654,982 (GRCm39)	missense	probably damaging	1.00
R8087:Zfp54	UTSW	17	21,655,260 (GRCm39)	missense	probably damaging	0.99
R8412:Zfp54	UTSW	17	21,654,910 (GRCm39)	missense	probably benign	0.03
R9224:Zfp54	UTSW	17	21,654,037 (GRCm39)	missense	probably benign	0.13
R9509:Zfp54	UTSW	17	21,654,629 (GRCm39)	nonsense	probably null
R9578:Zfp54	UTSW	17	21,655,186 (GRCm39)	missense	probably damaging	1.00
R9758:Zfp54	UTSW	17	21,654,149 (GRCm39)	missense	probably benign	0.17

Posted On

2015-12-18