Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02887:Ttc41'

363797

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ttc41

Ensembl Gene

ENSMUSG00000044937

Gene Name

tetratricopeptide repeat domain 41

Synonyms

Gnn, BC030307

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.114) question?

Stock #

IGL02887

Quality Score

Status

Chromosome

Chromosomal Location

86705811-86776844 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 86733654 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Phenylalanine at position 632 (Y632F)

Ref Sequence

ENSEMBL: ENSMUSP00000075059 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000075632] [ENSMUST00000219108]

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000070435

SMART Domains

Protein: ENSMUSP00000136633
Gene: ENSMUSG00000056366

Domain	Start	End	E-Value	Type
Pfam:Lipocalin_7	3	133	6.5e-13	PFAM
Pfam:Lipocalin	6	132	2.9e-31	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000075632
AA Change: Y632F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000075059
Gene: ENSMUSG00000044937
AA Change: Y632F

Domain	Start	End	E-Value	Type
low complexity region	216	229	N/A	INTRINSIC
low complexity region	307	315	N/A	INTRINSIC
Pfam:NACHT	337	515	5.4e-10	PFAM
SCOP:d1qqea_	805	1028	2e-5	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000219108

Predicted Effect

probably benign
Transcript: ENSMUST00000219476

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 86 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017B05Rik	A	G	9: 57,258,885	Y69H	probably damaging	Het
Afap1l2	A	T	19: 56,920,563	S310R	probably damaging	Het
Aldh7a1	A	G	18: 56,542,216		probably benign	Het
Anxa8	T	A	14: 34,096,524		probably null	Het
Ap1ar	T	C	3: 127,808,543	E282G	probably damaging	Het
Arl6ip6	T	G	2: 53,202,927	S155A	probably benign	Het
Armc9	T	C	1: 86,164,835	F107S	probably damaging	Het
Ash1l	C	A	3: 88,984,181	D1122E	probably benign	Het
Atp2b4	T	A	1: 133,728,774	I713F	probably damaging	Het
BC005624	A	C	2: 30,973,305		probably benign	Het
Calcrl	T	C	2: 84,339,242	D365G	probably benign	Het
Ccdc110	A	G	8: 45,943,184	N704S	probably benign	Het
Ccr10	G	T	11: 101,174,666	L13I	probably benign	Het
Cfap52	A	G	11: 67,953,515	Y125H	probably damaging	Het
Cnr2	C	A	4: 135,917,625	T338K	possibly damaging	Het
Cntn2	T	A	1: 132,516,570	D935V	probably damaging	Het
Cog7	T	C	7: 121,943,844	K448R	possibly damaging	Het
Csnk1g2	G	A	10: 80,638,535	D197N	probably damaging	Het
Cyp2e1	T	A	7: 140,763,911	S21T	probably damaging	Het
Dcaf11	T	C	14: 55,564,135	F187L	probably damaging	Het
Dmd	T	A	X: 83,878,504	F1460Y	probably benign	Het
Dnah11	G	A	12: 117,911,040	A4030V	probably damaging	Het
Dnah7a	A	G	1: 53,522,360	V2046A	possibly damaging	Het
Dnajc6	T	C	4: 101,639,300	I820T	probably damaging	Het
Dsel	T	C	1: 111,860,732	D691G	possibly damaging	Het
Fbp1	T	A	13: 62,869,080	M203L	probably benign	Het
Fndc1	T	C	17: 7,773,638	T409A	unknown	Het
Golgb1	T	G	16: 36,925,849	L2930R	probably damaging	Het
Htr2a	A	G	14: 74,645,143	T190A	probably benign	Het
Klra4	C	T	6: 130,044,070	C254Y	probably damaging	Het
Large1	A	T	8: 73,132,039	V67E	probably benign	Het
Lins1	T	C	7: 66,714,183	S609P	probably damaging	Het
Magi3	T	C	3: 104,095,157	E156G	probably damaging	Het
Mdh1b	A	G	1: 63,715,364		probably benign	Het
Mfsd6	T	C	1: 52,708,878	D276G	probably benign	Het
Myh9	T	A	15: 77,796,020	K185*	probably null	Het
Myof	T	C	19: 37,920,779		probably null	Het
Naip2	T	G	13: 100,161,512	Y672S	possibly damaging	Het
Nbeal1	A	G	1: 60,287,444		probably benign	Het
Nbeal2	T	A	9: 110,628,276	H2273L	probably damaging	Het
Neb	T	C	2: 52,200,721	K1346E	possibly damaging	Het
Nfatc2	T	C	2: 168,504,450	D908G	probably damaging	Het
Nlgn2	T	C	11: 69,827,254	N375S	probably benign	Het
Nova1	G	T	12: 46,720,722	Q139K	unknown	Het
Olfr328	A	G	11: 58,552,161	L26P	probably damaging	Het
Olfr775	T	A	10: 129,250,925	Y130*	probably null	Het
Olfr978	T	A	9: 39,993,813	M1K	probably null	Het
Opa3	A	T	7: 19,228,582	Q47L	probably damaging	Het
Pacs1	A	T	19: 5,135,110		probably benign	Het
Pappa2	T	A	1: 158,782,259	H1544L	probably damaging	Het
Pax8	A	G	2: 24,444,615	S48P	probably damaging	Het
Pdilt	T	C	7: 119,498,049	N70S	possibly damaging	Het
Poldip3	T	C	15: 83,129,268		probably benign	Het
Ppp6r1	T	A	7: 4,642,212	I80F	probably damaging	Het
Pycr2	T	A	1: 180,904,739		probably null	Het
Rapgef2	C	T	3: 79,068,880		probably benign	Het
Rbm44	T	A	1: 91,153,180	D363E	probably damaging	Het
Rnf213	A	T	11: 119,427,510	I1046F	probably damaging	Het
Ryr2	A	G	13: 11,591,269	S4476P	probably damaging	Het
Scara5	G	A	14: 65,762,829	D483N	unknown	Het
Scmh1	T	A	4: 120,468,389	F101Y	probably damaging	Het
Sgo2a	T	A	1: 58,016,352	V565E	probably damaging	Het
Simc1	T	C	13: 54,525,258	M473T	probably benign	Het
Skint6	T	A	4: 113,238,184	R93*	probably null	Het
Skint7	T	C	4: 111,982,178	V223A	possibly damaging	Het
Slc25a2	T	C	18: 37,637,886	I197V	probably benign	Het
Slit2	A	G	5: 48,217,474	T361A	probably benign	Het
Sugp1	G	A	8: 70,070,126	G492D	probably damaging	Het
Svep1	C	T	4: 58,145,301	G388D	probably damaging	Het
Tbpl2	G	T	2: 24,093,876	A183E	probably damaging	Het
Tcerg1l	G	T	7: 138,229,890	P453T	probably damaging	Het
Tdpoz2	T	C	3: 93,651,739	T309A	probably benign	Het
Thbs4	T	A	13: 92,790,798	Y61F	probably benign	Het
Tmem117	C	A	15: 95,094,775	P439T	probably damaging	Het
Tmem151a	A	G	19: 5,082,965	V71A	probably benign	Het
Tmem268	G	T	4: 63,568,454		probably benign	Het
Tmem43	T	A	6: 91,477,374	Y48N	possibly damaging	Het
Tmigd1	T	C	11: 76,913,986	V217A	probably benign	Het
Tmprss11g	A	T	5: 86,497,329		probably benign	Het
Tsn	T	C	1: 118,309,821	I38V	probably benign	Het
Vmn2r117	C	T	17: 23,475,578		probably benign	Het
Vmn2r12	A	T	5: 109,090,485	I463N	probably benign	Het
Wdsub1	T	A	2: 59,852,832	N466I	probably damaging	Het
Zdhhc21	A	T	4: 82,844,190	I56N	probably benign	Het
Zfand4	A	G	6: 116,273,656	T16A	possibly damaging	Het
Zmym4	T	C	4: 126,948,475	E15G	probably damaging	Het

Other mutations in Ttc41

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00846:Ttc41	APN	10	86736933	missense	possibly damaging	0.71
IGL01373:Ttc41	APN	10	86775957	missense	possibly damaging	0.61
IGL01636:Ttc41	APN	10	86776678	missense	probably benign
IGL01707:Ttc41	APN	10	86776767	missense	probably damaging	1.00
IGL01814:Ttc41	APN	10	86731026	missense	probably damaging	0.98
IGL01845:Ttc41	APN	10	86776624	missense	probably benign	0.03
IGL01918:Ttc41	APN	10	86713190	missense	probably damaging	1.00
IGL02374:Ttc41	APN	10	86775951	missense	probably damaging	1.00
IGL02489:Ttc41	APN	10	86760914	nonsense	probably null
IGL03061:Ttc41	APN	10	86736857	missense	possibly damaging	0.65
IGL03077:Ttc41	APN	10	86758348	missense	probably damaging	1.00
IGL03210:Ttc41	APN	10	86724414	critical splice donor site	probably null
IGL03242:Ttc41	APN	10	86776819	makesense	probably null
IGL03307:Ttc41	APN	10	86744440	missense	possibly damaging	0.76
BB003:Ttc41	UTSW	10	86776047	missense	probably benign	0.10
BB013:Ttc41	UTSW	10	86776047	missense	probably benign	0.10
R0071:Ttc41	UTSW	10	86736846	missense	probably benign	0.01
R0071:Ttc41	UTSW	10	86736846	missense	probably benign	0.01
R0379:Ttc41	UTSW	10	86712977	missense	possibly damaging	0.65
R0384:Ttc41	UTSW	10	86763947	missense	probably damaging	1.00
R0545:Ttc41	UTSW	10	86759097	missense	probably benign	0.00
R1589:Ttc41	UTSW	10	86776390	missense	probably benign	0.01
R1599:Ttc41	UTSW	10	86776573	missense	probably benign	0.04
R1608:Ttc41	UTSW	10	86775993	missense	probably damaging	1.00
R1670:Ttc41	UTSW	10	86776252	missense	possibly damaging	0.93
R1938:Ttc41	UTSW	10	86776214	missense	probably benign
R2398:Ttc41	UTSW	10	86713386	missense	possibly damaging	0.91
R2401:Ttc41	UTSW	10	86724374	missense	probably benign	0.42
R3117:Ttc41	UTSW	10	86724320	missense	possibly damaging	0.62
R3119:Ttc41	UTSW	10	86724320	missense	possibly damaging	0.62
R4805:Ttc41	UTSW	10	86729798	missense	possibly damaging	0.62
R4840:Ttc41	UTSW	10	86731125	missense	probably benign	0.10
R4841:Ttc41	UTSW	10	86731125	missense	probably benign	0.10
R4842:Ttc41	UTSW	10	86731125	missense	probably benign	0.10
R4884:Ttc41	UTSW	10	86731018	missense	probably benign	0.00
R4885:Ttc41	UTSW	10	86759102	missense	possibly damaging	0.76
R4898:Ttc41	UTSW	10	86776192	missense	possibly damaging	0.80
R5067:Ttc41	UTSW	10	86744544	missense	probably damaging	0.96
R5253:Ttc41	UTSW	10	86730942	missense	probably benign	0.13
R5268:Ttc41	UTSW	10	86744478	missense	possibly damaging	0.76
R5297:Ttc41	UTSW	10	86776579	missense	probably benign	0.04
R5301:Ttc41	UTSW	10	86719520	missense	probably benign	0.00
R5425:Ttc41	UTSW	10	86776630	missense	probably damaging	0.96
R5567:Ttc41	UTSW	10	86760920	critical splice donor site	probably null
R5635:Ttc41	UTSW	10	86736977	missense	probably benign	0.09
R5752:Ttc41	UTSW	10	86758346	missense	probably benign	0.33
R5868:Ttc41	UTSW	10	86750264	missense	possibly damaging	0.70
R5948:Ttc41	UTSW	10	86713224	missense	probably damaging	1.00
R6116:Ttc41	UTSW	10	86759088	critical splice acceptor site	probably null
R6247:Ttc41	UTSW	10	86776663	missense	probably benign	0.00
R6260:Ttc41	UTSW	10	86731159	missense	probably benign	0.20
R6260:Ttc41	UTSW	10	86733707	missense	probably benign	0.32
R6276:Ttc41	UTSW	10	86744449	missense	probably benign	0.01
R6458:Ttc41	UTSW	10	86758270	missense	possibly damaging	0.45
R7170:Ttc41	UTSW	10	86713503	missense	probably benign	0.17
R7348:Ttc41	UTSW	10	86750348	nonsense	probably null
R7382:Ttc41	UTSW	10	86776510	missense	probably damaging	0.97
R7509:Ttc41	UTSW	10	86713432	missense	probably damaging	1.00
R7689:Ttc41	UTSW	10	86759224	missense	probably damaging	1.00
R7807:Ttc41	UTSW	10	86776631	missense	probably benign	0.02
R7926:Ttc41	UTSW	10	86776047	missense	probably benign	0.10
R7998:Ttc41	UTSW	10	86736847	missense	probably benign	0.01
R8021:Ttc41	UTSW	10	86733714	missense	probably benign
R8059:Ttc41	UTSW	10	86712978	missense	probably benign	0.01
R8170:Ttc41	UTSW	10	86776166	missense	probably damaging	1.00
R8303:Ttc41	UTSW	10	86719630	missense	probably benign	0.06
R8375:Ttc41	UTSW	10	86763980	missense	probably damaging	0.97
R8383:Ttc41	UTSW	10	86719526	missense	probably benign	0.00
R8698:Ttc41	UTSW	10	86712977	missense	probably benign	0.00
R8773:Ttc41	UTSW	10	86729815	missense	probably benign	0.35
R8902:Ttc41	UTSW	10	86713001	missense	probably benign	0.06
R8985:Ttc41	UTSW	10	86731092	missense	possibly damaging	0.80
R8988:Ttc41	UTSW	10	86713735	missense	possibly damaging	0.88
R9007:Ttc41	UTSW	10	86733761	missense	probably damaging	1.00
R9137:Ttc41	UTSW	10	86776622	missense	probably benign	0.22
R9236:Ttc41	UTSW	10	86776730	missense	probably damaging	1.00
R9248:Ttc41	UTSW	10	86731249	missense	probably benign	0.00
R9287:Ttc41	UTSW	10	86763966	missense	probably benign	0.43
R9345:Ttc41	UTSW	10	86759225	missense	probably damaging	0.99
R9386:Ttc41	UTSW	10	86713026	missense	probably damaging	0.99
R9500:Ttc41	UTSW	10	86729862	missense	probably benign	0.03
R9570:Ttc41	UTSW	10	86713734	missense	possibly damaging	0.88
R9593:Ttc41	UTSW	10	86713185	missense	probably benign	0.24
X0024:Ttc41	UTSW	10	86724250	missense	probably damaging	1.00
X0064:Ttc41	UTSW	10	86729797	missense	probably benign	0.01

Posted On

2015-12-18